🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Sílvia Carbonell Sala

Centre for Genomic Regulation

ORCID: 0000-0001-7956-6215
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
29.8Author DataRank

Indexed papers

9in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 9 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

GENCODE reference annotation for the human and mouse genomes

Nucleic Acids Research(2018)10.1093/nar/gky955
Top 2%
8.2DataRank
Top 2%3533 citations

Mark Diekhans, Anne-Maud Ferreira, Todd A. Johnson, Irwin Jungreis, Jane E Loveland +59 more

Papers

Driven by 12 papers — median percentile 92. Top paper: “GENCODE reference annotation for the human and mouse genomes”.

GENCODE reference annotation for the human and mouse genomes

Nucleic Acids Research(2018)10.1093/nar/gky955
Top 2%
8.2DataRank
Top 2%3533 citations

Mark Diekhans, Anne-Maud Ferreira, Todd A. Johnson, Irwin Jungreis, Jane E Loveland +59 more

GENCODE 2021

Nucleic Acids Research(2020)10.1093/nar/gkaa1087
Top 3%
6.9DataRank
Top 3%1480 citations

Mark Diekhans, Irwin Jungreis, Julien Lagarde, Jane E Loveland, Shinichi Morishita +59 more

GENCODE: reference annotation for the human and mouse genomes in 2023

Nucleic Acids Research(2022)10.1093/nar/gkac1071
Top 4%
5.1DataRank
Top 4%663 citations

Sílvia Carbonell Sala, Mark Diekhans, Irwin Jungreis, Jane E Loveland, Jonathan M. Mudge +57 more

The status of the human gene catalogue

Nature(2023)10.1038/s41586-023-06490-x
Top 8%
2.9DataRank
Top 8%171 citations

Sílvia Carbonell Sala, Francisco M. De La Vega, Tiago Faial, Adam Frankish, T Gingeras +16 more

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

Nature Methods(2024)10.1038/s41592-024-02298-3
Top 8%
2.8DataRank
Top 8%216 citations

Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams +80 more

GENCODE 2025: reference gene annotation for human and mouse

Nucleic Acids Research(2024)10.1093/nar/gkae1078
Top 8%
2.7DataRank
Top 8%348 citations

Sílvia Carbonell Sala, Mark Diekhans, Jose Gonzalez Martinez, Toby Hunt, Irwin Jungreis +51 more

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.25.550582
Top 20%
0.991DataRank
Top 20%28 citations

Dingjie Wang, Fairlie Reese, Mark Diekhans, Sílvia Carbonell Sala, Brian A. Williams +78 more

Long-read transcriptomics of a diverse human cohort reveals ancestry bias in gene annotation

Nature Communications(2025)10.1038/s41467-025-66096-x
Top 55%
0.302DataRank
Top 55%5 citations

Fairlie Reese, Sílvia Carbonell Sala, Fabien Degalez, Carme Arnan, Winona Oliveros +5 more

Exploring a Circulating miRNA Signature for PMM2 ‐ CDG : Initial Insights Toward Diagnosis, Stratification, and Monitoring

Journal of Inherited Metabolic Disease(2025)10.1002/jimd.70104
N/A
0DataRank · unranked
1 citations

Lluc Cabús, Gregorio Nolasco, Mercè Bolasell, Jennifer Pérez‐Boza, Adrián Alcalá +10 more

CapTrap-Seq: A platform-agnostic and quantitative approach for high-fidelity full-length RNA transcript sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.16.543444
N/A
0DataRank · unranked
7 citations

Julien Lagarde, Hiromi Nishiyori, Emilio Palumbo, Carme Arnan, Hazuki Takahashi +4 more

The status of the human gene catalogue

arXiv (Cornell University)(2023)10.48550/arxiv.2303.13996
Top 100%
0DataRank
Top 100%0 citations

Sílvia Carbonell Sala, Francisco M. De La Vega, Tiago Faial, Adam Frankish, T Gingeras +16 more

CapTrap-seq: a platform-agnostic and quantitative approach for high-fidelity full-length RNA sequencing

Nature Communications(2024)10.1038/s41467-024-49523-3
N/A
0DataRank · unranked
24 citations

Tamara Perteghella, Julien Lagarde, Hiromi Nishiyori, Emilio Palumbo, Carme Arnan +5 more