Benjamin N. Bimber

Also affiliated with Oregon Health & Science University, Children's Cancer Therapy Development Institute, Vaccine and Gene Therapy Institute

Immunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 29 papers. Top paper: “Suppression of human and simian immunodeficiency virus replication with the CCR5-specific antibody Leronlimab in two species”.

Suppression of human and simian immunodeficiency virus replication with the CCR5-specific antibody Leronlimab in two species

PLoS Pathogens(2022)10.1371/journal.ppat.1010396

N/A

0.655DataRank · unranked

16 citations

Jason S. Reed, Gabriela M. Webb, Helen L. Wu, Jimmy T. Lê, Katherine B. Bateman +29 more

In vitro and in vivo characterization of a recombinant rhesus cytomegalovirus containing a complete genome

PLoS Pathogens(2020)10.1371/journal.ppat.1008666

N/A

0.546DataRank · unranked

37 citations

Eisa Mahyari, Craig N. Kreklywich, Luke S. Uebelhoer, Matthew R. McArdle, Matilda J. Moström +30 more

Allogeneic immunity clears latent virus following allogeneic stem cell transplantation in SIV-infected ART-suppressed macaques

Immunity(2023)10.1016/j.immuni.2023.04.019

N/A

0.483DataRank · unranked

24 citations

Kathleen Busman‐Sahay, Whitney C. Weber, Courtney Waytashek, Carla Boyle, Katherine B. Bateman +38 more

Long-term hepatitis B virus infection of rhesus macaques requires suppression of host immunity

Nature Communications(2022)10.1038/s41467-022-30593-0

N/A

0.457DataRank · unranked

20 citations

Lauren N. Rust, Jochen M. Wettengel, Sofiya Yusova, Miranda Fischer, Julien N. Carson +15 more

Primate resident memory T cells activate humoral and stromal immunity

Immunity(2025)10.1016/j.immuni.2025.09.009

N/A

0.441DataRank · unranked

11 citations

Benjamin N. Bimber, Clare F. Quarnstrom, Venkata S. Bollimpelli, Jason M. Schenkel, Kathryn Fraser +26 more

Viral opportunistic infections in Mauritian cynomolgus macaques undergoing allogeneic stem cell transplantation mirror human transplant infectious disease complications

Xenotransplantation(2020)10.1111/xen.12578

N/A

0.396DataRank · unranked

13 citations

Whitney C. Weber, Christine Shriver‐Munsch, Tonya Swanson, Mina Northrup, Heidi Price +24 more

Epigenetic MLH1 silencing concurs with mismatch repair deficiency in sporadic, naturally occurring colorectal cancer in rhesus macaques

Journal of Translational Medicine(2024)10.1186/s12967-024-04869-6

N/A

0.292DataRank · unranked

6 citations

Brendan J. Johnson, Karina Ray, George W. Schaaf, Declan Patrick Ryan, Cassandra Cullin +20 more

Enhanced interpretation of immune cell phenotype and function through a rhesus macaque single-cell atlas

Cell Genomics(2025)10.1016/j.xgen.2025.100849

N/A

0.292DataRank · unranked

6 citations

Gregory Boggy, GW McElfresh, Maanasa Kaza, Sebastian Benjamin, Benjamin Varco-Merth +17 more

Immune perturbation following SHIV infection is greater in newborn macaques than in infants

JCI Insight(2024)10.1172/jci.insight.144448

N/A

0.213DataRank · unranked

3 citations

Tracy Ordonez, Shilpi Pandey, Eisa Mahyari, Kosiso Onwuzu, Jason S. Reed +10 more

BFF and cellhashR: Analysis Tools for Accurate Demultiplexing of Cell Hashing Data

Zenodo (CERN European Organization for Nuclear Research)(2022)10.5281/zenodo.7222106

N/A

0DataRank · unranked

0 citations

GW McElfresh, Eisa Mahyari, Abigail B. Ventura, Scott G. Hansen, Louis J. Picker +2 more

JBrowse 2: a modular genome browser with views of synteny and structural variation

Genome biology(2023)10.1186/s13059-023-02914-z

N/A

0DataRank · unranked

880 citations

Garrett Stevens, Peter Xie, Teresa De Jesus Martinez, Elliot A. Hershberg, Angel Leung +15 more

Aerosol delivery of SARS-CoV-2 human monoclonal antibodies in macaques limits viral replication and lung pathology

Nature Communications(2023)10.1038/s41467-023-42440-x

N/A

0DataRank · unranked

20 citations

Alec J. Hirsch, Jeffrey J. Stanton, Anne D. Lewis, Lois M. A. Colgin, Ann J. Hessell +30 more

A Multifunctional and Highly Adaptable Reporter System for CRISPR/Cas Editing

International Journal of Molecular Sciences(2023)10.3390/ijms24098271

N/A

0DataRank · unranked

4 citations

Lea Hansen-Palmus, Sofiya Yusova, Lauren N. Rust, Sreya Biswas, Julien N. Carson +5 more

Human cytomegalovirus UL18 prevents priming of MHC-E– and MHC-II–restricted CD8 + T cells

Science Immunology(2024)10.1126/sciimmunol.adp5216

N/A

0DataRank · unranked

9 citations

Husam Taher, Mandana Mansouri, Ravi Iyer, Jason S. Reed, Courtney R. Papen +16 more

Viral escape mutations do not account for non-protection from SIVmac239 challenge in RhCMV/SIV vaccinated rhesus macaques

Frontiers in Immunology(2024)10.3389/fimmu.2024.1444621

N/A

0DataRank · unranked

0 citations

Justine Sunshine, GW McElfresh, Jason S. Reed, Reese Pathak, Katherine B. Bateman +9 more

Liver-specific transgenic expression of human NTCP in rhesus macaques confers HBV susceptibility on primary hepatocytes

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2413771122

N/A

0DataRank · unranked

3 citations

Jochen M. Wettengel, Sreya Biswas, Junghyun Ryu, Nadine Piekarski, Sofiya Yusova +13 more

Prophylactic and therapeutic neutralizing monoclonal antibody treatment prevents lethal yellow fever infection

JCI Insight(2025)10.1172/jci.insight.191665

N/A

0DataRank · unranked

1 citations

Michael J. Ricciardi, S Lutz, Sofiya Yusova, Johan J. Louw, Aaron Yrizarry-Medina +27 more

Long-read structural variant discovery and targeted short read genotyping enables population scale characterization of structural variation in rhesus macaques

Genome biology(2025)10.1186/s13059-025-03873-3

N/A

0DataRank · unranked

1 citations

C. Mulch, Samuel M. Peterson, Sebastian Benjamin, Nathan Gullicksrud, Adam J. Ericsen +5 more

BCG Vaccination at Birth Shapes the TCR Usage and Functional Profile of MR1T Cells at 9 Weeks of Age

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.09.681353

N/A

0DataRank · unranked

1 citations

GW McElfresh, Gwendolyn Swarbrick, Katherine H. Rott, Gregory Boggy, W Gerhard +9 more

CCR5 inhibition in critical COVID-19 patients decreases inflammatory cytokines, increases CD8 T-cells, and decreases SARS-CoV2 RNA in plasma by day 14

International Journal of Infectious Diseases(2020)10.1016/j.ijid.2020.10.101

N/A

0DataRank · unranked

148 citations

Harish Seethamraju, Kush Dhody, Michael J. Corley, Kazem Kazempour, Jay Lalezari +25 more

An immune-focused supplemental alignment pipeline captures information missed from dominant single-cell RNA-seq analyses, including allele-specific MHC-I regulation

Frontiers in Immunology(2025)10.3389/fimmu.2025.1596760

N/A

0DataRank · unranked

0 citations

GW McElfresh, Maanasa Kaza, Gregory Boggy, Benjamin Varco-Merth, Sohita Ojha +22 more

In vitro and in vivo characterization of a recombinant rhesus cytomegalovirus containing a complete genome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.02.129486

N/A

0DataRank · unranked

2 citations

Eisa Mahyari, Craig N. Kreklywich, Luke S. Uebelhoer, Matthew R. McArdle, Matilda J. Moström +27 more

Neutralization of SARS-CoV-2 variants by convalescent and BNT162b2 vaccinated serum

Nature Communications(2021)10.1038/s41467-021-25479-6

N/A

0DataRank · unranked

134 citations

Hans C. Leier, Zoë L. Lyski, Savannah K. McBride, Felicity J. Coulter, Jules B. Weinstein +14 more

Antibody-based CCR5 blockade protects Macaques from mucosal SHIV transmission

Nature Communications(2021)10.1038/s41467-021-23697-6

N/A

0DataRank · unranked

20 citations

Gabriela M. Webb, Helen L. Wu, Justin Greene, Shaheed Abdulhaqq, Katherine B. Bateman +28 more

Identification and Characterization of Antigen-Specific CD8+ T Cells Using Surface-Trapped TNF-α and Single-Cell Sequencing

The Journal of Immunology(2021)10.4049/jimmunol.2100535

N/A

0DataRank · unranked

9 citations

Abigail B. Ventura, Jason S. Reed, Arman Bashirova, Katherine B. Bateman, Eric McDonald +15 more

Differential Type 1 IFN Gene Expression in CD14+ Placenta Cells Elicited by Zika Virus Infection During Pregnancy

Frontiers in Virology(2021)10.3389/fviro.2021.783407

N/A

0DataRank · unranked

5 citations

Hannah L. Smith, Kosiso Onwuzu, Craig N. Kreklywich, Jessica L. Smith, Michael Denton +9 more

BFF and cellhashR: analysis tools for accurate demultiplexing of cell hashing data

Bioinformatics(2022)10.1093/bioinformatics/btac213

N/A

0DataRank · unranked

41 citations

GW McElfresh, Eisa Mahyari, Abigail B. Ventura, Scott G. Hansen, Louis J. Picker +2 more

Rapid, accurate mapping of transgene integration in viable rhesus macaque embryos using enhanced-specificity tagmentation-assisted PCR

Molecular Therapy — Methods & Clinical Development(2022)10.1016/j.omtm.2022.01.009

N/A

0DataRank · unranked

13 citations

William K. Chan, Jochen M. Wettengel, Carol Hanna, Benjamin J. Burwitz, Jon D. Hennebold +2 more

JBrowse 2: A modular genome browser with views of synteny and structural variation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.28.501447

N/A

0DataRank · unranked

31 citations

Garrett Stevens, Peter Xie, Teresa De Jesus Martinez, Elliot A. Hershberg, Angel Leung +15 more