🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

John Braisted

National Institutes of Health

ORCID: 0000-0001-8093-6463

Also affiliated with National Center for Advancing Translational Sciences

Biochemistry, Genetics and Molecular BiologyComputer ScienceEngineering

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
2.0Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

RaMP-DB 2.0: a renovated knowledgebase for deriving biological and chemical insight from metabolites, proteins, and genes

Bioinformatics(2022)10.1093/bioinformatics/btac726
Top 12%
1.8DataRank
Top 12%62 citations

Andrew Patt, Cole Tindall, Timothy Sheils, Jorge Neyra, Kyle Spencer +3 more

Papers

Driven by 21 papers — median percentile 59. Top paper: “RaMP-DB 2.0: a renovated knowledgebase for deriving biological and chemical insight from metabolites, proteins, and genes”.

RaMP-DB 2.0: a renovated knowledgebase for deriving biological and chemical insight from metabolites, proteins, and genes

Bioinformatics(2022)10.1093/bioinformatics/btac726
Top 12%
1.8DataRank
Top 12%62 citations

Andrew Patt, Cole Tindall, Timothy Sheils, Jorge Neyra, Kyle Spencer +3 more

Transcriptomic profiling in canines and humans reveals cancer specific gene modules and biological mechanisms common to both species

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009450
N/A
0.500DataRank · unranked
27 citations

John Braisted, David Gerhold, Gurmit Grewal, Christina Mazcko, Matthew Breen +3 more

Nucleotide, Phospholipid, and Kynurenine Metabolites Are Robustly Associated with COVID-19 Severity and Time of Plasma Sample Collection in a Prospective Cohort Study

International Journal of Molecular Sciences(2023)10.3390/ijms25010346
N/A
0.292DataRank · unranked
6 citations

Yulu Chen, John Braisted, Su H. Chu, Qingwen Chen, Meryl Stav +7 more

qHTSWaterfall: 3-dimensional visualization software for quantitative high-throughput screening (qHTS) data

Journal of Cheminformatics(2023)10.1186/s13321-023-00717-9
N/A
0.241DataRank · unranked
4 citations

John Braisted, Patricia Dranchak, James Inglese, Bryan Queme

RaMP-DB 2.0: a renovated knowledgebase for deriving biological and chemical insight from genes, proteins, and metabolites

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.19.476987
Top 70%
0.165DataRank
Top 70%2 citations

Andrew Patt, Cole Tindall, Tara Eicher, Timothy Sheils, Jorge Neyra +3 more

Consistent Multi-Omic Relationships Uncover Molecular Basis of Pediatric Asthma IgE Regulation

medRxiv(2024)10.1101/2024.06.05.24308502
N/A
0.165DataRank · unranked
2 citations

Rachel S. Kelly, John Braisted, Jalal Siddiqui, Juan C. Celedón, Clary B. Clish +7 more

Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans

Research Square(2022)10.21203/rs.3.rs-2331111/v1
N/A
0.104DataRank · unranked
1 citations

Gregory J. Tawa, David Gerhold, John Braisted, Carly M. Sayers, Troy A. McEachron +5 more

Correction to: Human Pluripotent Stem Cells for High-Throughput Drug Screening and Characterization of Small Molecules

Methods in molecular biology(2021)10.1007/7651_2021_458
N/A
0DataRank · unranked
1 citations

Pei‐Hsuan Chu, Claire Malley, John Braisted, Pinar Ormanoglu, Ruili Huang +9 more

Terfenadine resensitizes doxorubicin activity in drug-resistant ovarian cancer cells via an inhibition of CaMKII/CREB1 mediated ABCB1 expression

Frontiers in Oncology(2022)10.3389/fonc.2022.1068443
N/A
0DataRank · unranked
9 citations

Shu Yang, Yu‐Shan Cheng, Ni Sima, Wei Sun, Min Shen +4 more

Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans

Communications Biology(2023)10.1038/s42003-023-05208-z
N/A
0DataRank · unranked
41 citations

Gregory J. Tawa, David Gerhold, John Braisted, Carly M. Sayers, Troy A. McEachron +5 more

The value of prospective metabolomic susceptibility endotypes: broad applicability for infectious diseases

EBioMedicine(2023)10.1016/j.ebiom.2023.104791
N/A
0DataRank · unranked
5 citations

Kevin Mendez, Sofina Begum, Emily Dean, Haley Chatelaine, John Braisted +13 more

3D-Suspension culture platform for high throughput screening of neurotoxic chemicals using LUHMES dopaminergic neurons

SLAS DISCOVERY(2024)10.1016/j.slasd.2024.01.004
N/A
0DataRank · unranked
6 citations

Ruili Huang, John Braisted, Pei‐Hsuan Chu, Anton Simeonov, David Gerhold +1 more

A general assay platform to study protein pharmacology using ligand-dependent structural dynamics

Nature Communications(2025)10.1038/s41467-025-59658-6
N/A
0DataRank · unranked
4 citations

Patricia Dranchak, Mahesh Aitha, Renier H. P. van Neer, Divia Shah, Ravi Tharakan +5 more

Stem Cell-Derived Endothelial Cell Model that Responds to Tobacco Smoke Like Primary Endothelial Cells

Chemical Research in Toxicology(2020)10.1021/acs.chemrestox.9b00363
N/A
0DataRank · unranked
17 citations

Guibin Chen, David Kuo, John Braisted, Ruili Huang, Yuhong Wang +4 more

High-throughput screening identifies Aurora kinase B as a critical therapeutic target for Merkel cell carcinoma

Nature Communications(2025)10.1038/s41467-025-56504-7
N/A
0DataRank · unranked
5 citations

Khalid A. Garman, Daniel J. Urban, Amy Coxon, Berkley E. Gryder, Natasha T. Hill +17 more

The MT1G Gene in LUHMES Neurons Is a Sensitive Biomarker of Neurotoxicity

Neurotoxicity Research(2020)10.1007/s12640-020-00272-3
N/A
0DataRank · unranked
24 citations

John Braisted, Pei‐Hsuan Chu, David Gerhold, Zhi‐Bin Tong

Robotic High-Throughput Biomanufacturing and Functional Differentiation of Human Pluripotent Stem Cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.03.235242
N/A
0DataRank · unranked
7 citations

Pinar Ormanoglu, Jaroslav Slamecka, Claire Malley, Pei‐Hsuan Chu, Vukasin M. Jovanovic +12 more

Robotic high-throughput biomanufacturing and functional differentiation of human pluripotent stem cells

Stem Cell Reports(2021)10.1016/j.stemcr.2021.11.004
N/A
0DataRank · unranked
69 citations

Pinar Ormanoglu, Jaroslav Slamecka, Claire Malley, Pei‐Hsuan Chu, Vukasin M. Jovanovic +13 more

SENP1-mediated deSUMOylation of JAK2 regulates its kinase activity and platinum drug resistance

Cell Death and Disease(2021)10.1038/s41419-021-03635-6
N/A
0DataRank · unranked
37 citations

Ruiqin Wu, Mingo M. H. Yung, Jing Sun, Zhuqing Li, Hai Feng Ou Yang +14 more

Human Pluripotent Stem Cells for High-Throughput Drug Screening and Characterization of Small Molecules

Methods in molecular biology(2021)10.1007/7651_2021_394
N/A
0DataRank · unranked
10 citations

Pei‐Hsuan Chu, Claire Malley, John Braisted, Pinar Ormanoglu, Ruili Huang +9 more

Genome-Edited Coincidence and PMP22-HiBiT Fusion Reporter Cell Lines Enable an Artifact-Suppressive Quantitative High-Throughput Screening Strategy for PMP22 Gene-Dosage Disorder Drug Discovery

ACS Pharmacology & Translational Science(2021)10.1021/acsptsci.1c00110
N/A
0DataRank · unranked
9 citations

John Braisted, Patricia Dranchak, John J. Moran, Hunter G. Larson, Bryan Queme +7 more