Joseph N. Paulson

Also affiliated with Yale University, Emergency University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

6.1Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A reference map of the human binary protein interactome

Nature(2020)10.1038/s41586-020-2188-x

Top 4%

5.4DataRank

Top 4%1333 citations

Dae‐Kyum Kim, L. Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian +83 more

Papers

Driven by 25 papers — median percentile 82. Top paper: “A reference map of the human binary protein interactome”.

A reference map of the human binary protein interactome

Nature(2020)10.1038/s41586-020-2188-x

Top 4%

5.4DataRank

Top 4%1333 citations

Dae‐Kyum Kim, L. Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian +83 more

Multivariable association discovery in population-scale meta-omics studies

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009442

N/A

1.2DataRank · unranked

2502 citations

Ali Rahnavard, Lauren J. McIver, Siyuan Ma, Yancong Zhang, Long H. Nguyen +15 more

Sex Differences in Gene Expression and Regulatory Networks across 29 Human Tissues

Cell Reports(2020)10.1016/j.celrep.2020.107795

N/A

0.945DataRank · unranked

545 citations

Cho-Yi Chen, Marieke L. Kuijjer, Joseph N. Paulson, Abhijeet R. Sonawane, Maud Fagny +5 more

Multivariable Association Discovery in Population-scale Meta-omics Studies

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.20.427420

N/A

0.923DataRank · unranked

469 citations

Ali Rahnavard, Lauren J. McIver, Siyuan Ma, Yancong Zhang, Long H. Nguyen +15 more

The Network Zoo: a multilingual package for the inference and analysis of gene regulatory networks

Genome biology(2023)10.1186/s13059-023-02877-1

N/A

0.654DataRank · unranked

77 citations

Tian Wang, Camila M. Lopes‐Ramos, Viola Fanfani, Des Weighill, Rebekka Burkholz +20 more

Complete Genome Sequences of the Human Pathogen Paenibacillus thiaminolyticus Mbale and Type Strain P. thiaminolyticus NRRL B-4156

Microbiology Resource Announcements(2020)10.1128/mra.00181-20

Top 32%

0.612DataRank

Top 32%11 citations

Lijun Zhang, Joseph N. Paulson, Mathieu Almeida, Benjamin von Bredow, Dona Saumya S. Wijetunge +5 more

Transcriptional immunogenomic analysis reveals distinct immunological clusters in paediatric nervous system tumours

Genome Medicine(2023)10.1186/s13073-023-01219-x

N/A

0.488DataRank · unranked

15 citations

Pengbo Beck, Alberto Delaidelli, Derek A. Oldridge, Sumedha Sudhaman, Kelsey Zhu +19 more

AGAMEMNON: an Accurate metaGenomics And MEtatranscriptoMics quaNtificatiON analysis suite

Genome biology(2022)10.1186/s13059-022-02610-4

N/A

0.464DataRank · unranked

21 citations

Fatemeh Almodaresi, Mohsen Zakeri, Joseph N. Paulson, Rob Patro, Artemis G. Hatzigeorgiou +2 more

The Network Zoo: a multilingual package for the inference and analysis of biological networks

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.30.494077

N/A

0.132DataRank · unranked

1 citations

Tian Wang, Camila M. Lopes‐Ramos, Viola Fanfani, Deborah Weighill, Rebekka Burkholz +19 more

Differential richness inference for 16S rRNA marker gene surveys

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.07.467583

N/A

0DataRank · unranked

1 citations

Eric Slud, Christine Hehnly, Lijun Zhang, James R. Broach, Rafael A. Irizarry +3 more

Disentangling the genetic basis of rhizosphere microbiome assembly in tomato

Nature Communications(2022)10.1038/s41467-022-30849-9

N/A

0DataRank · unranked

177 citations

Stalin Sarango Flores, Thom Griffioen, Xinya Pan, Elmar van der Wijk, Lotte J. U. Pronk +13 more

mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis

BMC Genomics(2022)10.1186/s12864-022-08558-w

N/A

0DataRank · unranked

14 citations

Sarah U. Morton, Christine Hehnly, Jasmine Smith, Trang T. Doan, Rafael A. Irizarry +5 more

Immune activation during Paenibacillus brain infection in African infants with frequent cytomegalovirus co-infection

iScience(2021)10.1016/j.isci.2021.102351

N/A

0DataRank · unranked

13 citations

Sarah U. Morton, Mercedeh Movassagh, Qiang Zhang, Christine Hehnly, Lijun Zhang +15 more

Differential richness inference for 16S rRNA marker gene surveys

Genome biology(2022)10.1186/s13059-022-02722-x

N/A

0DataRank · unranked

10 citations

Eric Slud, Christine Hehnly, Lijun Zhang, James R. Broach, Rafael A. Irizarry +3 more

Cytomegalovirus infections in infants in Uganda: Newborn-mother pairs, neonates with sepsis, and infants with hydrocephalus

International Journal of Infectious Diseases(2022)10.1016/j.ijid.2022.02.005

N/A

0DataRank · unranked

5 citations

Paddy Ssentongo, Lisa M. Bebell, Kathy Burgoine, Joel Bazira, Claudio Fronterrè +21 more

Vaginal Microbiome Topic Modelling of Laboring Ugandan Women With and Without Fever

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.401703

N/A

0DataRank · unranked

0 citations

Lisa M. Bebell, Kathy Burgoine, Christine Hehnly, Lijun Zhang, Kim Moran +19 more

Transcriptional immunogenomic analysis reveals distinct immunological clusters in pediatric nervous system tumours

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.20.508719

N/A

0DataRank · unranked

1 citations

Pengbo Beck, Alberto Delaidelli, Derek A. Oldridge, Sumedha Sudhaman, Kelsey Zhu +19 more

Type IV pili is a critical virulence factor in clinical isolates of Paenibacillus thiaminolyticus

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.24.477451

N/A

0DataRank · unranked

0 citations

Aiqin Shi, Paddy Ssentongo, Lijun Zhang, Albert M. Isaacs, Sarah U. Morton +11 more

Neonatal Paenibacilliosis: Paenibacillus thiaminolyticus as a Novel Cause of Neonatal Sepsis with High Risk of Sequelae in Uganda

medRxiv(2022)10.1101/2022.11.07.22281940

N/A

0DataRank · unranked

0 citations

Kathy Burgoine, Elias Kumbakumba, Moses Ochora, Christine Hehnly, Francis Bajunirwe +27 more

Paenibacillus infection with frequent viral coinfection contributes to postinfectious hydrocephalus in Ugandan infants

Science Translational Medicine(2020)10.1126/scitranslmed.aba0565

N/A

0DataRank · unranked

55 citations

Brent L. Williams, Christine Hehnly, Nischay Mishra, Shamim A. Sinnar, Lijun Zhang +47 more

Paenibacillus spp infection among infants with postinfectious hydrocephalus in Uganda: an observational case-control study

The Lancet Microbe(2023)10.1016/s2666-5247(23)00106-4

N/A

0DataRank · unranked

15 citations

Christine Hehnly, Kathy Burgoine, Paddy Ssentongo, Jessica E. Ericson, M. S. Binoj Kumar +34 more

Neonatal Paenibacilliosis: Paenibacillus Infection as a Novel Cause of Sepsis in Term Neonates With High Risk of Sequelae in Uganda

Clinical Infectious Diseases(2023)10.1093/cid/ciad337

N/A

0DataRank · unranked

14 citations

Kathy Burgoine, Elias Kumbakumba, Moses Ochora, Christine Hehnly, Francis Bajunirwe +27 more

mbQTL: an R/Bioconductor package for microbial quantitative trait loci (QTL) estimation

Bioinformatics(2023)10.1093/bioinformatics/btad565

N/A

0DataRank · unranked

5 citations

Steven J. Schiff, Joseph N. Paulson, Mercedeh Movassagh

Nasal Microbiota and Infectious Complications After Elective Surgical Procedures

JAMA Network Open(2021)10.1001/jamanetworkopen.2021.8386

N/A

0DataRank · unranked

8 citations

Joseph N. Paulson, Sarabdeep Singh, Emmanuel F. Mongodin, Karen C. Carroll, Claire M. Fraser +3 more

Poor Surgical Outcomes Following Paenibacillus Infant Infectious Hydrocephalus

medRxiv(2025)10.1101/2025.05.08.25327256

N/A

0DataRank · unranked

0 citations

Davis Natukwatsa, Peter Ssenyonga, Justin Onen, John Mugamba, Ronald Mulondo +11 more

Joseph N. Paulson

Indexed papers

Top data-sharing exemplar

Papers