🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

L. Şafak Yılmaz

University of Massachusetts Chan Medical School

ORCID: 0000-0001-8258-4465
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.823Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

WormPaths: Caenorhabditis elegans metabolic pathway annotation and visualization

Genetics(2021)10.1093/genetics/iyab089
Top 24%
0.823DataRank
Top 24%35 citations

Gabrielle E. Giese, Amy D. Holdorf, Sushila Bhattacharya, Cédric Diot, Aurian P. García-González +13 more

Papers

Driven by 12 papers — median percentile 76. Top paper: “WormPaths: Caenorhabditis elegans metabolic pathway annotation and visualization”.

WormPaths: Caenorhabditis elegans metabolic pathway annotation and visualization

Genetics(2021)10.1093/genetics/iyab089
Top 24%
0.823DataRank
Top 24%35 citations

Gabrielle E. Giese, Amy D. Holdorf, Sushila Bhattacharya, Cédric Diot, Aurian P. García-González +13 more

Systems-level design principles of metabolic rewiring in an animal

Nature(2025)10.1038/s41586-025-08636-5
N/A
0.504DataRank · unranked
21 citations

Hefei Zhang, Thomas Hodder, Wen Wang, Chad L. Myers, L. Şafak Yılmaz +2 more

Compartmentalization of metabolism between cell types in multicellular organisms: A computational perspective

Current Opinion in Systems Biology(2021)10.1016/j.coisb.2021.100407
N/A
0DataRank · unranked
6 citations

L. Şafak Yılmaz, Albertha J.M. Walhout, Xuhang Li

A D-2-Hydroxyglutarate dehydrogenase mutant reveals a critical role for ketone body metabolism in Caenorhabditis elegans development

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.16.492161
N/A
0DataRank · unranked
2 citations

Hefei Zhang, Xuhang Li, Shivani Nanda, Thomas B. Leland, Bennett W. Fox +5 more

Linking enzyme expression to metabolic flux

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.17.516982
N/A
0DataRank · unranked
0 citations

Albertha J.M. Walhout, L. Şafak Yılmaz, Xuhang Li

Systems‐level transcriptional regulation of Caenorhabditis elegans metabolism

Molecular Systems Biology(2023)10.15252/msb.202211443
N/A
0DataRank · unranked
20 citations

Marc‐Antoine Jacques, Wen Wang, Chad L. Myers, L. Şafak Yılmaz, Albertha J.M. Walhout +1 more

A D-2-hydroxyglutarate dehydrogenase mutant reveals a critical role for ketone body metabolism in Caenorhabditis elegans development

PLoS Biology(2023)10.1371/journal.pbio.3002057
N/A
0DataRank · unranked
17 citations

Hefei Zhang, Xuhang Li, Shivani Nanda, Thomas B. Leland, Bennett W. Fox +6 more

Host–microbe interactions rewire metabolism in a C. elegans model of leucine breakdown deficiency

Nature Metabolism(2024)10.1038/s42255-024-01098-5
N/A
0DataRank · unranked
6 citations

Bennett W. Fox, Rui Guo, Brian J. Curtis, Jingfang Yu, Sookyung Kim +7 more

A systems-level, semi-quantitative landscape of metabolic flux in C. elegans

Nature(2025)10.1038/s41586-025-08635-6
N/A
0DataRank · unranked
14 citations

Xuhang Li, Tenzin Tseyang, Gabrielle E. Giese, Hui Wang, Bo Yao +7 more

Modeling tissue‐relevant Caenorhabditis elegans metabolism at network, pathway, reaction, and metabolite levels

Molecular Systems Biology(2020)10.15252/msb.20209649
N/A
0DataRank · unranked
51 citations

Xuhang Li, Shivani Nanda, Bennett W. Fox, Frank C. Schroeder, Albertha J.M. Walhout +1 more

Enhanced flux potential analysis links changes in enzyme expression to metabolic flux

Molecular Systems Biology(2025)10.1038/s44320-025-00090-9
N/A
0DataRank · unranked
3 citations

Albertha J.M. Walhout, L. Şafak Yılmaz, Xuhang Li

WormPaths: Caenorhabditis elegans metabolic pathway annotation and visualization

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.22.424026
N/A
0DataRank · unranked
36 citations

Gabrielle E. Giese, Amy D. Holdorf, Sushila Bhattacharya, Cédric Diot, Aurian P. García-González +13 more