Randy J. Read

Materials ScienceBiochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

12.7Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Overview of theCCP4 suite and current developments

Acta Crystallographica Section D Biological Crystallography(2011)10.1107/s0907444910045749

Top 1%

11.9DataRank

Top 1%12583 citations

Charles C. Ballard, Eleanor J. Dodson, Paul Emsley, Phil R. Evans, Ronan M. Keegan +21 more

Papers

Driven by 31 papers — median percentile 88. Top paper: “Overview of theCCP4 suite and current developments”.

Overview of theCCP4 suite and current developments

Acta Crystallographica Section D Biological Crystallography(2011)10.1107/s0907444910045749

Top 1%

11.9DataRank

Top 1%12583 citations

Charles C. Ballard, Eleanor J. Dodson, Paul Emsley, Phil R. Evans, Ronan M. Keegan +21 more

PHENIX: a comprehensive Python-based system for macromolecular structure solution

Acta Crystallographica Section D Biological Crystallography(2010)10.1107/s0907444909052925

N/A

1.5DataRank · unranked

24351 citations

Pavel V. Afonine, Gábor Bunkóczi, Vincent B. Chen, Ian W. Davis, Nathaniel Echols +19 more

Phasercrystallographic software

Journal of Applied Crystallography(2007)10.1107/s0021889807021206

N/A

1.5DataRank · unranked

20761 citations

Ralf W. Grosse-Kunstleve, Paul D. Adams, Martyn D. Winn, Laurent C. Storoni, Randy J. Read +3 more

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

Acta Crystallographica Section D Biological Crystallography(1998)10.1107/s0907444998003254

N/A

1.4DataRank · unranked

15776 citations

G. M. Clore, W. L. DeLano, Ralf W. Grosse-Kunstleve, J. S. Jiang, J. Kuszewski +20 more

AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination

Nature Methods(2023)10.1038/s41592-023-02087-4

N/A

0.884DataRank · unranked

362 citations

Dorothée Liebschner, Tristan I. Croll, Christopher J. Williams, Airlie J. McCoy, Billy K. Poon +6 more

Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge

Nature Methods(2024)10.1038/s41592-024-02321-7

Top 23%

0.871DataRank

Top 23%18 citations

Andriy Kryshtafovych, Grigore Pintilie, S.K. Burley, Jiri Cerny, Vincent B. Chen +76 more

AlphaFold predictions are valuable hypotheses, and accelerate but do not replace experimental structure determination

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517405

N/A

0.587DataRank · unranked

49 citations

Dorothée Liebschner, Tristan I. Croll, Christopher J. Williams, Airlie J. McCoy, Billy K. Poon +6 more

Likelihood-based interactive local docking into cryo-EM maps in ChimeraX

Acta Crystallographica Section D Structural Biology(2024)10.1107/s2059798324006776

N/A

0.394DataRank · unranked

8 citations

Eric F. Pettersen, Airlie J. McCoy, Tristan I. Croll, Thomas C. Terwilliger, Billy K. Poon +4 more

Density modification of cryo-EM maps

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.13.091884

N/A

0DataRank · unranked

3 citations

Oleg V. Sobolev, Pavel V. Afonine, Paul D. Adams, Randy J. Read, Thomas C. Terwilliger

Accurate prediction of protein structures and interactions using a three-track neural network

Science(2021)10.1126/science.abj8754

N/A

0DataRank · unranked

5780 citations

Frank DiMaio, Ivan Anishchenko, Justas Dauparas, Sergey Ovchinnikov, Gyu Rie Lee +27 more

Detection of translational noncrystallographic symmetry in Patterson functions

Acta Crystallographica Section D Structural Biology(2021)10.1107/s2059798320016836

N/A

0DataRank · unranked

10 citations

Massimo Sammito, Pavel V. Afonine, Isabel Usón, Randy J. Read, Airlie J. McCoy +1 more

Likelihood-based estimation of substructure content from single-wavelength anomalous diffraction (SAD) intensity data

Acta Crystallographica Section D Structural Biology(2021)10.1107/s2059798321004538

N/A

0DataRank · unranked

2 citations

Airlie J. McCoy, Randy J. Read, Kaushik Hatti

Likelihood-based estimation of substructure content from single-wavelength anomalous diffraction (SAD) intensity data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.07.430107

N/A

0DataRank · unranked

1 citations

Airlie J. McCoy, Randy J. Read, Kaushik Hatti

Improved AlphaFold modeling with implicit experimental information

Nature Methods(2022)10.1038/s41592-022-01645-6

N/A

0DataRank · unranked

138 citations

Billy K. Poon, Pavel V. Afonine, Christopher J. Schlicksup, Tristan I. Croll, Claudia Millán +4 more

Putting AlphaFold models to work with phenix.process_predicted_model and ISOLDE

Acta Crystallographica Section D Structural Biology(2022)10.1107/s2059798322010026

N/A

0DataRank · unranked

69 citations

Tristan I. Croll, Claudia Millán, Billy K. Poon, Christopher J. Schlicksup, Randy J. Read +2 more

Measuring and using information gained by observing diffraction data

Acta Crystallographica Section D Structural Biology(2020)10.1107/s2059798320001588

N/A

0DataRank · unranked

9 citations

Robert D. Oeffner, Airlie J. McCoy, Randy J. Read

Improved AlphaFold modeling with implicit experimental information

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.07.475350

N/A

0DataRank · unranked

28 citations

Billy K. Poon, Pavel V. Afonine, Christopher J. Schlicksup, Tristan I. Croll, Claudia Millán +4 more

Accelerating crystal structure determination with iterative AlphaFold prediction

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.18.517112

N/A

0DataRank · unranked

7 citations

Pavel V. Afonine, Dorothée Liebschner, Tristan I. Croll, Airlie J. McCoy, Robert D. Oeffner +6 more

Likelihood-based docking of models into cryo-EM maps

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.20.521188

N/A

0DataRank · unranked

1 citations

Airlie J. McCoy, Thomas C. Terwilliger, Randy J. Read, Claudia Millán

Likelihood-based signal and noise analysis for docking of models into cryo-EM maps

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.20.521171

N/A

0DataRank · unranked

0 citations

Claudia Millán, Airlie J. McCoy, Thomas C. Terwilliger, Randy J. Read

Phasertng: directed acyclic graphs for crystallographic phasing

Acta Crystallographica Section D Structural Biology(2020)10.1107/s2059798320014746

N/A

0DataRank · unranked

16 citations

Duncan H. Stockwell, Massimo Sammito, Robert D. Oeffner, Kaushik Hatti, Tristan I. Croll +2 more

Accelerating crystal structure determination with iterative AlphaFold prediction

Acta Crystallographica Section D Structural Biology(2023)10.1107/s205979832300102x

N/A

0DataRank · unranked

58 citations

Pavel V. Afonine, Dorothée Liebschner, Tristan I. Croll, Airlie J. McCoy, Robert D. Oeffner +6 more

Likelihood-based docking of models into cryo-EM maps

Acta Crystallographica Section D Structural Biology(2023)10.1107/s2059798323001602

N/A

0DataRank · unranked

23 citations

Airlie J. McCoy, Thomas C. Terwilliger, Randy J. Read, Claudia Millán

Likelihood-based signal and noise analysis for docking of models into cryo-EM maps

Acta Crystallographica Section D Structural Biology(2023)10.1107/s2059798323001596

N/A

0DataRank · unranked

9 citations

Claudia Millán, Airlie J. McCoy, Thomas C. Terwilliger, Randy J. Read

Improvement of cryo-EM maps by density modification

Nature Methods(2020)10.1038/s41592-020-0914-9

N/A

0DataRank · unranked

330 citations

Steven J. Ludtke, Randy J. Read, Paul D. Adams, Pavel V. Afonine, Thomas C. Terwilliger

Outcomes of the EMDataResource Cryo-EM Ligand Modeling Challenge

Research Square(2024)10.21203/rs.3.rs-3864137/v1

N/A

0DataRank · unranked

2 citations

Andriy Kryshtafovych, Grigore Pintilie, S.K. Burley, Jiri Cerny, Vincent Chen +76 more

Model Quality Assessment for CASP16

Proteins Structure Function and Bioinformatics(2025)10.1002/prot.70037

N/A

0DataRank · unranked

7 citations

Gabriel Studer, Randy J. Read, Alisia Fadini

Highlights of Model Quality Assessment in CASP16

Proteins Structure Function and Bioinformatics(2025)10.1002/prot.70035

N/A

0DataRank · unranked

1 citations

Recep Adiyaman, Shaima N Alhaddad, Bijan Behzadi, Jianlin Cheng, Xinyue Cui +19 more

AlphaFold as a Prior: Experimental Structure Determination Conditioned on a Pretrained Neural Network

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.18.638828

N/A

0DataRank · unranked

13 citations

Minhuan Li, Airlie J. McCoy, Thomas C. Terwilliger, Randy J. Read, Doeke R. Hekstra +2 more

Density modification of cryo-EM maps

Acta Crystallographica Section D Structural Biology(2020)10.1107/s205979832001061x

N/A

0DataRank · unranked

46 citations

Oleg V. Sobolev, Pavel V. Afonine, Paul D. Adams, Randy J. Read, Thomas C. Terwilliger

Model Quality Assessment for CASP16

Apollo (University of Cambridge)(2025)10.22541/au.174490079.94623107/v1

N/A

0DataRank · unranked

2 citations

Gabriel Studer, Randy J. Read, Alisia Fadini

Randy J. Read

Indexed papers

Top data-sharing exemplar

Papers