Yasaman Jami‐Alahmadi

Agricultural and Biological SciencesMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 46 papers. Top paper: “Transcriptional drifts associated with environmental changes in endothelial cells”.

Transcriptional drifts associated with environmental changes in endothelial cells

eLife(2023)10.7554/elife.81370

N/A

1.2DataRank · unranked

41 citations

Feiyang Ma, Austin Quach, Anhyo Jeong, Hannah Sunshine, Vanessa M. Freitas +9 more

MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO

Science(2021)10.1126/science.abg6130

N/A

0.680DataRank · unranked

92 citations

Brandon A. Boone, Luke Strauskulage, C. Jake Harris, Gundeep Kaur, Matthew A. Gladstone +9 more

Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis

Nature Communications(2022)10.1038/s41467-022-34648-0

N/A

0.538DataRank · unranked

35 citations

Yafei Wang, Ming Wang, Fan Yang, Quentin Thomas, Yan Xue +10 more

The splicing regulators RBM5 and RBM10 are subunits of the U2 snRNP engaged with intron branch sites on chromatin

Molecular Cell(2024)10.1016/j.molcel.2024.02.039

N/A

0.524DataRank · unranked

32 citations

Chia-Ho Lin, Jeffrey Huang, Lin Zhou, Yasaman Jami‐Alahmadi, Parham Peyda +3 more

Divergent acyl carrier protein decouples mitochondrial Fe-S cluster biogenesis from fatty acid synthesis in malaria parasites

eLife(2021)10.7554/elife.71636

N/A

0.483DataRank · unranked

24 citations

Jaime Sepulveda, Yasaman Jami‐Alahmadi, Hahnbeom Park, James A. Wohlschlegel, Paul A. Sigala +1 more

Integrated Transcriptome and Proteome Analyses Reveal the Regulatory Role of miR-146a in Human Limbal Epithelium via Notch Signaling

Cells(2020)10.3390/cells9102175

N/A

0.457DataRank · unranked

20 citations

Mangesh Kulkarni, Aleksandra Leszczynska, Jie Tang, Ruchi Shah, Yasaman Jami‐Alahmadi +7 more

The cell-surface shared proteome of astrocytes and neurons and the molecular foundations of their multicellular interactions

Neuron(2025)10.1016/j.neuron.2025.05.019

N/A

0.385DataRank · unranked

12 citations

Vijaya Pandey, Vanessa H Casha, Zhe Qu, Yasaman Jami‐Alahmadi, Viviana Gradinaru +3 more

Proteomic Analysis of Ferrochelatase Interactome in Erythroid and Non-Erythroid Cells

Life(2023)10.3390/life13020577

N/A

0.330DataRank · unranked

8 citations

Harry A. Dailey, Yasaman Jami‐Alahmadi, James A. Wohlschlegel, Amy E. Medlock, Chibuike David

Interaction of chikungunya virus glycoproteins with macrophage factors controls virion production

The EMBO Journal(2024)10.1038/s44318-024-00193-3

N/A

0.269DataRank · unranked

5 citations

Sangeetha Ramachandran, Serina Huang, Erin Kim, Yasaman Jami‐Alahmadi, Prashant Kaushal +4 more

The Nse5/6-like SIMC1-SLF2 Complex Localizes SMC5/6 to Viral Replication Centers

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.17.492321

N/A

0.241DataRank · unranked

4 citations

Minghua Nie, Nicola Zilio, Shintaro Maeda, Yasaman Jami‐Alahmadi, Eros Lazzerini Denchi +5 more

The apoptotic splicing regulators RBM5 and RBM10 are subunits of the U2 snRNP engaged with intron branch sites on chromatin

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.21.558883

N/A

0.208DataRank · unranked

3 citations

Chia-Ho Lin, Jeffrey Huang, Lin Zhou, Yasaman Jami‐Alahmadi, James Wohlschlegel +2 more

Substrate trapping approach identifies TRIM25 ubiquitination targets involved in diverse cellular and antiviral processes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.17.484727

N/A

0.208DataRank · unranked

3 citations

Serina Huang, Yasaman Jami‐Alahmadi, Gerald M. McInerney, James A. Wohlschlegel, Melody M. H. Li +1 more

Midbrain extracellular matrix and microglia are associated with cognition in aging mice

Nature Communications(2025)10.1038/s41467-025-66434-z

N/A

0.165DataRank · unranked

2 citations

A. Gutierrez, Yasaman Jami‐Alahmadi, Vijaya Pandey, Lin Pan, Ye Zhang +4 more

Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.12.507673

N/A

0DataRank · unranked

0 citations

Yafei Wang, Ming Wang, Fan Yang, Quentin Thomas, Yan Xue +10 more

Astrocyte–neuron subproteomes and obsessive–compulsive disorder mechanisms

Nature(2023)10.1038/s41586-023-05927-7

N/A

0DataRank · unranked

119 citations

Yasaman Jami‐Alahmadi, Jakelyn Chacon, Stefanie L. Moye, Blanca Díaz‐Castro, James A. Wohlschlegel +2 more

The MOM1 complex recruits the RdDM machinery via MORC6 to establish de novo DNA methylation

Nature Communications(2023)10.1038/s41467-023-39751-4

N/A

0DataRank · unranked

28 citations

Ming Wang, Zhenhui Zhong, Javier Gallego‐Bartolomé, Suhua Feng, Yasaman Jami‐Alahmadi +6 more

Neuronal and astrocytic contributions to Huntington’s disease dissected with zinc finger protein transcriptional repressors

Cell Reports(2023)10.1016/j.celrep.2022.111953

N/A

0DataRank · unranked

30 citations

Joselyn S. Soto, Yasaman Jami‐Alahmadi, Srushti Tiwari, Riki Kawaguchi, James A. Wohlschlegel +2 more

Direct tests of cytochrome c and c 1 functions in the electron transport chain of malaria parasites

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2301047120

N/A

0DataRank · unranked

21 citations

Henry Wienkers, Rebecca G. Marvin, Shai-anne Nalder, Aldo E. García-Guerrero, Peter E. VanNatta +8 more

ACD15, ACD21, and SLN regulate the accumulation and mobility of MBD6 to silence genes and transposable elements

Science Advances(2023)10.1126/sciadv.adi9036

N/A

0DataRank · unranked

18 citations

Lucia Ichino, Shuya Wang, Jason Gardiner, Jaewon Yun, Yasaman Jami‐Alahmadi +9 more

In vivo identification of astrocyte and neuron subproteomes by proximity-dependent biotinylation

Nature Protocols(2023)10.1038/s41596-023-00923-7

N/A

0DataRank · unranked

12 citations

Yasaman Jami‐Alahmadi, James A. Wohlschlegel, Baljit S. Khakh, Joselyn S. Soto

Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.10.523456

N/A

0DataRank · unranked

4 citations

Zhenhui Zhong, Javier Gallego‐Bartolomé, Suhua Feng, Yuan‐Hsin Shih, Mukun Liu +8 more

ACD15, ACD21 and SLN regulate accumulation and mobility of MBD6 to silence genes and transposable elements

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.23.554494

N/A

0DataRank · unranked

3 citations

Lucia Ichino, Shuya Wang, Jason Gardiner, Jaewon Yun, Yasaman Jami‐Alahmadi +9 more

Chikungunya virus glycoproteins transform macrophages into productive viral dissemination vessels

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.29.542714

N/A

0DataRank · unranked

2 citations

Sangeetha Ramachandran, Serina Huang, Yasaman Jami‐Alahmadi, James A. Wohlschlegel, Melody M. H. Li +1 more

The MOM1 complex recruits the RdDM machinery via MORC6 to establish de novo DNA methylation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.10.523455

N/A

0DataRank · unranked

1 citations

Ming Wang, Zhenhui Zhong, Javier Gallego‐Bartolomé, Suhua Feng, Yasaman Jami‐Alahmadi +6 more

Direct Tests of Cytochrome Function in the Electron Transport Chain of Malaria Parasites

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.23.525242

N/A

0DataRank · unranked

0 citations

Henry Wienkers, Rebecca G. Marvin, Shai-anne Nalder, Aldo E. García-Guerrero, Peter E. VanNatta +8 more

Crym-positive striatal astrocytes gate perseverative behaviour

Nature(2024)10.1038/s41586-024-07138-0

N/A

0DataRank · unranked

48 citations

Joselyn S. Soto, Kay E. Linker, Stefanie L. Moye, Yasaman Jami‐Alahmadi, Anthony E. Jones +5 more

EDC-3 and EDC-4 regulate embryonic mRNA clearance and biomolecular condensate specialization

Cell Reports(2024)10.1016/j.celrep.2024.114781

N/A

0DataRank · unranked

6 citations

Yasaman Jami‐Alahmadi, Adarsh K. Mayank, Javeria Rizwan, Jia Xu, Tianhao Cheng +6 more

Malaria parasites require a divergent heme oxygenase for apicoplast gene expression and biogenesis

eLife(2024)10.7554/elife.100256

N/A

0DataRank · unranked

4 citations

Yasaman Jami‐Alahmadi, Armiyaw S. Nasamu, Shota Kudo, Akinobu Senoo, Celine Slam +6 more

Malaria parasites require a divergent heme oxygenase for apicoplast gene expression and biogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.30.596652

N/A

0DataRank · unranked

2 citations

Yasaman Jami‐Alahmadi, Armiyaw S. Nasamu, Shota Kudo, Akinobu Senoo, Celine Slam +6 more

SCF FBXL5 ubiquitin ligase regulates stability of von-Hippel Lindau protein and the HIF1α-dependent response to hypoxia

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.29.577840

N/A

0DataRank · unranked

0 citations

Vijaya Pandey, Kyle Lien, Li Lu, Yasaman Jami‐Alahmadi, Ahmad Kassem +2 more

EDC-3 and EDC-4 Regulate Embryonic mRNA Clearance and Biomolecular Condensate Specialization

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.04.583404

N/A

0DataRank · unranked

0 citations

Yasaman Jami‐Alahmadi, Adarsh K. Mayank, Javeria Rizwan, Jia Xu, Tianhao Cheng +6 more

Author response: Malaria parasites require a divergent heme oxygenase for apicoplast gene expression and biogenesis

(2024)10.7554/elife.100256.1.sa0

N/A

0DataRank · unranked

0 citations

Yasaman Jami‐Alahmadi, Armiyaw S. Nasamu, Shota Kudo, Akinobu Senoo, Celine Slam +6 more

EXP1 is required for organisation of EXP2 in the intraerythrocytic malaria parasite vacuole

Cellular Microbiology(2020)10.1111/cmi.13168

N/A

0DataRank · unranked

61 citations

John M. Beck, Shima Rayatpisheh, Yasaman Jami‐Alahmadi, James A. Wohlschlegel, Daniel E. Goldberg +2 more

Progesterone receptor membrane component 1 (PGRMC1) regulates Heme trafficking through mitochondria-ER junctions

Journal of Inorganic Biochemistry(2025)10.1016/j.jinorgbio.2025.113093

N/A

0DataRank · unranked

1 citations

Chibuike D. Obi, Martônio Ponte Viana, Mathilda M. Willoughby, Osiris Martinez-Guzman, Aaliyah Wadley +11 more

The plant mobile domain proteins MAIN and MAIL1 interact with the phosphatase PP7L to regulate gene expression and silence transposable elements in Arabidopsis thaliana

PLoS Genetics(2020)10.1371/journal.pgen.1008324

N/A

0DataRank · unranked

26 citations

Nathalie Picault, Julie Descombin, Yasaman Jami‐Alahmadi, Suhua Feng, Etienne Bucher +5 more

Wnt-inducible Lrp6-APEX2 interacting proteins identify ESCRT machinery and Trk-fused gene as components of the Wnt signaling pathway

Scientific Reports(2020)10.1038/s41598-020-78019-5

N/A

0DataRank · unranked

40 citations

Yasaman Jami‐Alahmadi, Alyssa Dsouza, Nydia Tejeda‐Muñoz, Lauren V. Albrecht, Eric Sosa +3 more

Wnt-inducible Lrp6-APEX2 Interacting Proteins Identify ESCRT Machinery and Trk-Fused Gene as Components of the Wnt Signaling Pathway

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.03.072579

N/A

0DataRank · unranked

3 citations

Yasaman Jami‐Alahmadi, Alyssa Dsouza, Nydia Tejeda‐Muñoz, Lauren V. Albrecht, Eric Sosa +3 more

Arabidopsis MORC proteins function in the efficient establishment of RNA directed DNA methylation

Nature Communications(2021)10.1038/s41467-021-24553-3

N/A

0DataRank · unranked

56 citations

Zhenhui Zhong, C. Jake Harris, Javier Gallego‐Bartolomé, Ming Wang, Colette L. Picard +10 more

Aim32 is a dual-localized 2Fe-2S mitochondrial protein that functions in redox quality control

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.101135

N/A

0DataRank · unranked

8 citations

Owen R. Dailey, Daniel J. Simon, Kamilah Roca-Datzer, Yasaman Jami‐Alahmadi, Mikayla S. Hennen +4 more

Elucidation of TRIM25 ubiquitination targets involved in diverse cellular and antiviral processes

PLoS Pathogens(2022)10.1371/journal.ppat.1010743

N/A

0DataRank · unranked

45 citations

Serina Huang, Yasaman Jami‐Alahmadi, Gerald M. McInerney, James A. Wohlschlegel, Melody M. H. Li +1 more

Comprehensive identification of SWI/SNF complex subunits underpins deep eukaryotic ancestry and reveals new plant components

Communications Biology(2022)10.1038/s42003-022-03490-x

N/A

0DataRank · unranked

36 citations

Borja Diego‐Martin, Peggy Hsuanyu Kuo, Yasaman Jami‐Alahmadi, Ajay A. Vashisht, James A. Wohlschlegel +4 more

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers

eLife(2022)10.7554/elife.79676

N/A

0DataRank · unranked

30 citations

Minghua Nie, Nicola Zilio, Shintaro Maeda, Yasaman Jami‐Alahmadi, Eros Lazzerini Denchi +5 more

Iron-regulated assembly of the cytosolic iron–sulfur cluster biogenesis machinery

Journal of Biological Chemistry(2022)10.1016/j.jbc.2022.102094

N/A

0DataRank · unranked

23 citations

William D. Barshop, Ajay A. Vashisht, Vijaya Pandey, Stephanie Leal, Shima Rayatpisheh +4 more

High-Field Asymmetric Waveform Ion Mobility Spectrometry Interface Enhances Parallel Reaction Monitoring on an Orbitrap Mass Spectrometer

Analytical Chemistry(2022)10.1021/acs.analchem.2c01287

N/A

0DataRank · unranked

9 citations

Jihui Sha, Fanglei Xue, Yasaman Jami‐Alahmadi, Kathrin Plath, James A. Wohlschlegel +1 more

A gene silencing screen uncovers diverse tools for targeted gene repression in Arabidopsis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.01.514775

N/A

0DataRank · unranked

3 citations

Zhenhui Zhong, Javier Gallego‐Bartolomé, Zheng Li, Suhua Feng, Peggy Hsuanyu Kuo +7 more

Multi-site phosphorylation of the TOPBP1 ATR Activation Domain propels ATR signaling during the response to DNA breaks

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.19.508511

N/A

0DataRank · unranked

2 citations

Kenna Ruis, Katrina Montales, Oanh Huynh, Yasaman Jami‐Alahmadi, James A. Wohlschlegel +2 more