🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Ryan R. Wick

The University of Melbourne

ORCID: 0000-0001-8349-0778

Also affiliated with Peter Doherty Institute, Melbourne Genomics Health Alliance, Monash University

Biochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 10 papers. Top paper: “Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads”.

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

PLOS Computational Biology(2017)10.1371/journal.pcbi.1005595
N/A
1.4DataRank · unranked
8532 citations

Louise M. Judd, Claire L. Gorrie, Kathryn E. Holt, Ryan R. Wick

Polishing De Novo Nanopore Assemblies of Bacteria and Eukaryotes With FMLRC2

Molecular Biology and Evolution(2023)10.1093/molbev/msad048
N/A
0.996DataRank · unranked
45 citations

Ryan R. Wick, James Holt, Jeremy Wang, Q X Charles Mak

Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data

eLife(2024)10.7554/elife.98300.3
N/A
0.557DataRank · unranked
40 citations

Ryan R. Wick, Louise M. Judd, An N Nguyen, Eike J Steinig, Ouli Xie +5 more

Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.30.613582
N/A
0.292DataRank · unranked
5 citations

Jane Hawkey, Martin Hunt, Zamin Iqbal, Jacqueline A. Keane, Ayorinde O. Afolayan +33 more

How low can you go? Short-read polishing of Oxford Nanopore bacterial genome assemblies

Microbial Genomics(2024)10.1099/mgen.0.001254
N/A
0DataRank · unranked
105 citations

Louise M. Judd, Robert A. Edwards, Sarah Vreugde, Timothy P. Stinear, Ryan R. Wick +1 more

Hybracter: enabling scalable, automated, complete and accurate bacterial genome assemblies

Microbial Genomics(2024)10.1099/mgen.0.001244
N/A
0DataRank · unranked
95 citations

Ghais Houtak, Ryan R. Wick, Vijini Mallawaarachchi, Michael J. Roach, Bhavya Papudeshi +5 more

Hybracter: Enabling Scalable, Automated, Complete and Accurate Bacterial Genome Assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.12.571215
N/A
0DataRank · unranked
22 citations

Ghais Houtak, Ryan R. Wick, Vijini Mallawaarachchi, Michael J. Roach, Bhavya Papudeshi +5 more

Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi

Genome Medicine(2025)10.1186/s13073-025-01551-4
N/A
0DataRank · unranked
2 citations

Jane Hawkey, Martin Hunt, Zamin Iqbal, Jacqueline A. Keane, Ayorinde O. Afolayan +33 more

Quantifying plasmid movement in drug-resistant Shigella species using phylodynamic inference

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.27.514108
N/A
0DataRank · unranked
1 citations

Ryan R. Wick, Louise M. Judd, Deborah A. Williamson, Trevor Bedford, Benjamin P. Howden +3 more

How low can you go? Short-read polishing of Oxford Nanopore bacterial genome assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.07.584013
N/A
0DataRank · unranked
23 citations

Louise M. Judd, Robert A. Edwards, Sarah Vreugde, Timothy P. Stinear, Ryan R. Wick +1 more