🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

E. Michael Gertz

ORCID: 0000-0001-8390-4387
Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile
0.104Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A machine learning framework for supervised treatment response prediction from tumor transcriptomics: A large-scale pan-cancer study

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.24.684491
Top 78%
0.104DataRank
Top 78%1 citations

E. Michael Gertz, Nishanth Ulhas Nair, Sumit Mukherjee, Sumeet Patiyal, Thomas Cantore +10 more

Papers

Driven by 18 papers — median percentile 22. Top paper: “PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem”.

PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem

Bioinformatics(2020)10.1093/bioinformatics/btaa464
N/A
0.477DataRank · unranked
23 citations

Farid Rashidi Mehrabadi, Salem Malikić, Xuan Cindy Li, Osnat Bartok, Kevin Litchfield +12 more

Chromosome 7 Gain Compensates for Chromosome 10 Loss in Glioma

Cancer Research(2024)10.1158/0008-5472.can-24-1366
N/A
0.449DataRank · unranked
19 citations

Alejandro A. Schäffer, E. Michael Gertz, Kuoyuan Cheng, Johanna Zerbib, Avinash Sahu +6 more

A machine learning framework for supervised treatment response prediction from tumor transcriptomics: A large-scale pan-cancer study

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.24.684491
Top 78%
0.104DataRank
Top 78%1 citations

E. Michael Gertz, Nishanth Ulhas Nair, Sumit Mukherjee, Sumeet Patiyal, Thomas Cantore +10 more

Tumor heterogeneity assessed by sequencing and fluorescence in situ hybridization (FISH) data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.29.970392
N/A
0DataRank · unranked
3 citations

E. Michael Gertz, Alejandro A. Schäffer, Xuecong Fu, Yifeng Tao, Kerstin Heselmeyer‐Haddad +10 more

PhISCS-BnB: A Fast Branch and Bound Algorithm for the Perfect Tumor Phylogeny Reconstruction Problem

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.06.938043
N/A
0DataRank · unranked
2 citations

Farid Rashidi Mehrabadi, Xuan Cindy Li, Salem Malikić, Alejandro A. Schäffer, E. Michael Gertz +8 more

Predicting cancer prognosis and drug response from the tumor microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.21.214148
N/A
0DataRank · unranked
0 citations

E. Michael Gertz, Eytan Ruppin, Leandro C. Hermida

The tumour microenvironment shapes innate lymphoid cells in patients with hepatocellular carcinoma

Gut(2021)10.1136/gutjnl-2021-325288
N/A
0DataRank · unranked
116 citations

E. Michael Gertz, Alejandro A. Schäffer, Amanda J. Craig, Benjamin Ruf, Varun Subramanyam +22 more

Integration of adeno-associated virus (AAV) into the genomes of most Thai and Mongolian liver cancer patients does not induce oncogenesis

BMC Genomics(2021)10.1186/s12864-021-08098-9
N/A
0DataRank · unranked
24 citations

Dana A. Dominguez, Lesley M. Chapman, E. Michael Gertz, Anuradha Budhu, Marshonna Forgues +10 more

High Levels of Chromosomal Copy Number Alterations and TP53 Mutations Correlate with Poor Outcome in Younger Breast Cancer Patients

American Journal Of Pathology(2020)10.1016/j.ajpath.2020.04.015
N/A
0DataRank · unranked
17 citations

Kerstin Heselmeyer‐Haddad, Annette Lischka, Daniela Hirsch, David Fiedler, Yue Hu +11 more

Deconvolving clinically relevant cellular immune crosstalk from bulk gene expression using CODEFACS and LIRICS

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.20.427515
N/A
0DataRank · unranked
2 citations

Sushant Patkar, Joo Sang Lee, E. Michael Gertz, Welles Robinson, Fiorella Schischlik +4 more

RETRACTED ARTICLE: Predicting cancer prognosis and drug response from the tumor microbiome

Nature Communications(2022)10.1038/s41467-022-30512-3
N/A
0DataRank · unranked
62 citations

E. Michael Gertz, Eytan Ruppin, Leandro C. Hermida

Deconvolving Clinically Relevant Cellular Immune Cross-talk from Bulk Gene Expression Using CODEFACS and LIRICS Stratifies Patients with Melanoma to Anti–PD-1 Therapy

Cancer Discovery(2022)10.1158/2159-8290.cd-21-0887
N/A
0DataRank · unranked
61 citations

Sushant Patkar, Joo Sang Lee, E. Michael Gertz, Welles Robinson, Fiorella Schischlik +4 more

Race is a key determinant of the human intratumor microbiome

Cancer Cell(2022)10.1016/j.ccell.2022.08.007
N/A
0DataRank · unranked
34 citations

Yuan Liu, Leandro C. Hermida, E. Michael Gertz, Zhao Zhang, Qiang Li +4 more

Single-cell resolved ploidy and chromosomal aberrations in nonalcoholic steatohepatitis-(NASH) induced hepatocellular carcinoma and its precursor lesions

Scientific Reports(2022)10.1038/s41598-022-27173-z
N/A
0DataRank · unranked
5 citations

Irianna Torres, Elizabeth Brauneis, Tim Thörner, Alejandro A. Schäffer, E. Michael Gertz +6 more

Impact of fludarabine exposure on the depth and duration of lymphopenia and CAR T-cell outcomes.

Journal of Clinical Oncology(2023)10.1200/jco.2023.41.16_suppl.10033
N/A
0DataRank · unranked
0 citations

Bonnie Yates, Nicole Binder, Haneen Shalabi, Cody J. Peer, William D. Figg +3 more

Tumor heterogeneity assessed by sequencing and fluorescence in situ hybridization (FISH) data

Bioinformatics(2021)10.1093/bioinformatics/btab504
N/A
0DataRank · unranked
13 citations

E. Michael Gertz, Alejandro A. Schäffer, Xuecong Fu, Yifeng Tao, Kerstin Heselmeyer‐Haddad +10 more

Single-Cell–Derived Primary Rectal Carcinoma Cell Lines Reflect Intratumor Heterogeneity Associated with Treatment Response

Clinical Cancer Research(2020)10.1158/1078-0432.ccr-19-1984
N/A
0DataRank · unranked
13 citations

Lena Anthuber, Daniela Hirsch, Darawalee Wangsa, Justin Lack, Nicole E. McNeil +17 more

scRNA-seq analysis of colon and esophageal tumors uncovers abundant microbial reads in myeloid cells undergoing proinflammatory transcriptional alterations

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.14.096230
N/A
0DataRank · unranked
5 citations

Joshua K. Stone, Fiorella Schischlik, Billel Gasmi, Michael C. Kelly, Charlie Seibert +13 more