Lukas F. Milles

Physics and AstronomyBiochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 15 papers. Top paper: “Robust deep learning based protein sequence design using ProteinMPNN”.

Robust deep learning based protein sequence design using ProteinMPNN

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.03.494563

N/A

0.717DataRank · unranked

118 citations

Ivan Anishchenko, Nathaniel R. Bennett, Hua Bai, Robert J. Ragotte, Lukas F. Milles +17 more

Hallucination of closed repeat proteins containing central pockets

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-01112-6

N/A

0.396DataRank · unranked

13 citations

Derrick R. Hicks, Dmitri Zorine, Justas Dauparas, Basile I. M. Wicky, Lukas F. Milles +7 more

Hallucinating protein assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.09.493773

N/A

0.241DataRank · unranked

4 citations

Lukas F. Milles, Alexis Courbet, Robert J. Ragotte, Justas Dauparas, Elias S. Kinfu +11 more

Designed miniproteins potently inhibit and protect against MERS-CoV

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.03.621760

N/A

0.165DataRank · unranked

2 citations

M. Alejandra Tortorici, Nicholas Catanzaro, Amin Addetia, Brian Coventry, Heather M. Froggatt +17 more

Language models generalize beyond natural proteins

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.21.521521

N/A

0DataRank · unranked

202 citations

Ori Kabeli, Yilun Du, Basile I. M. Wicky, Lukas F. Milles, Justas Dauparas +5 more

Hallucination of closed repeat proteins containing central pockets

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.01.506251

N/A

0DataRank · unranked

3 citations

Derrick R. Hicks, Dmitri Zorine, Justas Dauparas, Basile I. M. Wicky, Lukas F. Milles +7 more

De novo design of small beta barrel proteins

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2207974120

N/A

0DataRank · unranked

36 citations

Davin R. Jensen, David Feldman, Doug Tischer, Ayesha Saleem, Cameron M. Chow +11 more

De novo design of knotted tandem repeat proteins

Nature Communications(2023)10.1038/s41467-023-42388-y

N/A

0DataRank · unranked

25 citations

Brittany Takushi, Ryan D. Kibler, Lukas F. Milles, Carolina T. Orozco, Jonathan D. Jones +4 more

Improving Protein Expression, Stability, and Function with ProteinMPNN

Journal of the American Chemical Society(2024)10.1021/jacs.3c10941

N/A

0DataRank · unranked

314 citations

Reyes Núñez‐Franco, Indrek Kalvet, Samuel J. Pellock, Basile I. M. Wicky, Lukas F. Milles +11 more

Designed miniproteins potently inhibit and protect against MERS-CoV

Cell Reports(2025)10.1016/j.celrep.2025.115760

N/A

0DataRank · unranked

12 citations

M. Alejandra Tortorici, Nicholas J. Catanzaro, Amin Addetia, Brian Coventry, Heather M. Froggatt +18 more

Design of proteins presenting discontinuous functional sites using deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.29.402743

N/A

0DataRank · unranked

39 citations

Sidney Lisanza, Jue Wang, Runze Dong, Ivan Anishchenko, Lukas F. Milles +3 more

Designed NGF mimetics with reduced nociceptive signatures in neurons

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.14.648806

N/A

0DataRank · unranked

6 citations

Aerin Yang, Damien Detraux, David E. Johnson, Chloe J. Peach, Natasha I. Edman +30 more

Deep learning methods for designing proteins scaffolding functional sites

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.10.468128

N/A

0DataRank · unranked

36 citations

Sidney Lisanza, David Juergens, Doug Tischer, Ivan Anishchenko, Minkyung Baek +10 more

Robust deep learning–based protein sequence design using ProteinMPNN

Science(2022)10.1126/science.add2187

N/A

0DataRank · unranked

1912 citations

Ivan Anishchenko, Nathaniel R. Bennett, Hua Bai, Robert J. Ragotte, Lukas F. Milles +17 more

Scaffolding protein functional sites using deep learning

Science(2022)10.1126/science.abn2100

N/A

0DataRank · unranked

474 citations

Sidney Lisanza, David Juergens, Doug Tischer, Joseph L. Watson, Karla M. Castro +19 more