🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Sophie Octavia

ORCID: 0000-0001-8506-9127

Agricultural and Biological SciencesImmunology and MicrobiologyBiochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 4 papers. Top paper: “Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi”.

Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.30.613582

N/A

0.292DataRank · unranked

5 citations

Jane Hawkey, Martin Hunt, Zamin Iqbal, Jacqueline A. Keane, Ayorinde O. Afolayan +33 more

Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2

mBio(2020)10.1128/mbio.01610-20

N/A

0DataRank · unranked

321 citations

Danielle E. Anderson, Barnaby Edward Young, Martin Linster, Feng Zhu, Jayanthi Jayakumar +20 more

Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi

Genome Medicine(2025)10.1186/s13073-025-01551-4

N/A

0DataRank · unranked

2 citations

Jane Hawkey, Martin Hunt, Zamin Iqbal, Jacqueline A. Keane, Ayorinde O. Afolayan +33 more

The TyphiNET data visualisation dashboard: unlocking Salmonella Typhi genomics data to support public health

Genome Medicine(2025)10.1186/s13073-025-01470-4

N/A

0DataRank · unranked

4 citations

Louise Cerdeira, Vandana Sharma, Megan E. Carey, Kathryn E. Holt, David M. Aanensen +69 more