Xiting Yan

Also affiliated with Precision for Medicine (United States), Yale New Haven Health System

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.1Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Integrated Single Cell Atlas of Endothelial Cells of the Human Lung

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.21.347914

Top 19%

1.1DataRank

Top 19%32 citations

Taylor Adams, Carlos Cosme, Micha Sam Brickman Raredon, Norihito Omote, Sergio Poli +22 more

Papers

Driven by 32 papers — median percentile 81. Top paper: “Lung Microenvironments and Disease Progression in Fibrotic Hypersensitivity Pneumonitis”.

Lung Microenvironments and Disease Progression in Fibrotic Hypersensitivity Pneumonitis

American Journal of Respiratory and Critical Care Medicine(2021)10.1164/rccm.202103-0569oc

N/A

1.5DataRank · unranked

37 citations

John E. McDonough, Jonas C. Schupp, Xiting Yan, Arno Vanstapel, Anke Van Herck +21 more

MicroRNA miR-24-3p reduces DNA damage responses, apoptosis, and susceptibility to chronic obstructive pulmonary disease

JCI Insight(2020)10.1172/jci.insight.134218

N/A

1.4DataRank · unranked

40 citations

Feng Wan, Eric Finnemore, Willy Roque, Sojin Kim, Isabel Bazán +15 more

Transcriptomics of bronchoalveolar lavage cells identifies new molecular endotypes of sarcoidosis

European Respiratory Journal(2021)10.1183/13993003.02950-2020

N/A

1.2DataRank · unranked

58 citations

Xiting Yan, Kevin F. Gibson, Mridu Gulati, Jonas C. Schupp, Giuseppe DeIuliis +24 more

Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis

Science Advances(2020)10.1126/sciadv.aba1983

N/A

1.1DataRank · unranked

1447 citations

Jonas C. Schupp, Sergio Poli, Ehab Ayaub, Nir Neumark, Farida Ahangari +13 more

Integrated Single Cell Atlas of Endothelial Cells of the Human Lung

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.21.347914

Top 19%

1.1DataRank

Top 19%32 citations

Taylor Adams, Carlos Cosme, Micha Sam Brickman Raredon, Norihito Omote, Sergio Poli +22 more

Immune dysregulation and autoreactivity correlate with disease severity in SARS-CoV-2-associated multisystem inflammatory syndrome in children

Immunity(2021)10.1016/j.immuni.2021.04.003

N/A

0.836DataRank · unranked

262 citations

Nina N. Brodsky, Tomokazu S. Sumida, Michela Comi, Hiromitsu Asashima, Kenneth B. Hoehn +27 more

Single-Cell Analysis Reveals Novel Immune Perturbations in Fibrotic Hypersensitivity Pneumonitis

American Journal of Respiratory and Critical Care Medicine(2024)10.1164/rccm.202401-0078oc

N/A

0.568DataRank · unranked

43 citations

Avraham Unterman, Nebal Abu Hussein, Prapti Sharma, Fadi Nikola, Jasper Flint +20 more

A deep generative model for deciphering cellular dynamics and in silico drug discovery in complex diseases

Nature Biomedical Engineering(2025)10.1038/s41551-025-01423-7

N/A

0.457DataRank · unranked

20 citations

Jonas C. Schupp, Taylor Adams, Gérémy Clair, A. Justet, Farida Ahangari +17 more

Single-cell characterization of a model of poly I:C-stimulated peripheral blood mononuclear cells in severe asthma

Respiratory Research(2021)10.1186/s12931-021-01709-9

N/A

0.449DataRank · unranked

19 citations

Maria P. Diaz-Soto, Miguel F. Sanmamed, Taylor Adams, Jonas C. Schupp, Amolika Gupta +9 more

G2S3: A gene graph-based imputation method for single-cell RNA sequencing data

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009029

N/A

0.416DataRank · unranked

15 citations

Yunqing Liu, Qile Dai, Xiting Yan, Zuoheng Wang, Weimiao Wu

Latent-space embedding of expression data identifies gene signatures from sputum samples of asthmatic patients

BMC Bioinformatics(2020)10.1186/s12859-020-03785-y

N/A

0.398DataRank · unranked

9 citations

Tianxiao Li, Daniel Spakowicz, Xiting Yan, Geoffrey Chupp, Mark Gerstein +1 more

iDESC: identifying differential expression in single-cell RNA sequencing data with multiple subjects

BMC Bioinformatics(2023)10.1186/s12859-023-05432-8

N/A

0.396DataRank · unranked

13 citations

Jiayi Zhao, Taylor Adams, Ningya Wang, Jonas C. Schupp, Weimiao Wu +6 more

Alveolar epithelial cell plasticity and injury memory in human pulmonary fibrosis

10.1101/2025.06.10.658504

N/A

0.373DataRank · unranked

11 citations

Jonas C. Schupp, Agshin Balayev, Johad Khoury, Aurélien Justet, Fadi Nikola +15 more

Gene coexpression networks reveal novel molecular endotypes in alpha-1 antitrypsin deficiency

Thorax(2020)10.1136/thoraxjnl-2019-214301

N/A

0.345DataRank · unranked

9 citations

Wenlan Zang, Milica Vukmirovic, Xiting Yan, Taylor Adams, Giuseppe DeIuliis +20 more

SDePER: a hybrid machine learning and regression method for cell-type deconvolution of spatial barcoding-based transcriptomic data

Genome biology(2024)10.1186/s13059-024-03416-2

N/A

0.330DataRank · unranked

8 citations

Ningshan Li, Ji Qi, Gang Xu, Jiayi Zhao, Nating Wang +12 more

Single Cell Transcriptional Archetypes of Airway Inflammation in Cystic Fibrosis

medRxiv(2020)10.1101/2020.03.06.20032292

N/A

0.292DataRank · unranked

6 citations

Sara Khanal, José L. Gómez, Maor Sauler, Taylor Adams, Geoffrey Chupp +10 more

A hybrid machine learning and regression method for cell type deconvolution of spatial barcoding-based transcriptomic data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.24.554722

N/A

0.273DataRank · unranked

3 citations

Ningshan Li, Ji Qi, Gang Xu, Jiayi Zhao, Nating Wang +11 more

Single-cell RNA Sequencing Analysis of Sputum Cell Transcriptomes Reveals Pathways and Communication Networks That Contribute to the Pathogenesis of Asthma

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.03.31.646405

N/A

0.241DataRank · unranked

3 citations

Qing Liu, Taylor Adams, Jonas C. Schupp, Sihan Li, Stark Huang +9 more

Transcriptomics of Bronchoalveolar Lavage Cells Identifies New Molecular Endotypes of Sarcoidosis

medRxiv(2020)10.1101/2020.07.24.20161448

N/A

0DataRank · unranked

5 citations

Xiting Yan, Kevin F. Gibson, Mridu Gulati, Jonas C. Schupp, Giuseppe DeIuliis +24 more

Differences in Mortality Among Patients With Asthma and COPD Hospitalized With COVID-19

The Journal of Allergy and Clinical Immunology In Practice(2023)10.1016/j.jaip.2023.07.006

N/A

0DataRank · unranked

7 citations

Haseena Rajeevan, Michael Simonov, Seohyuk Lee, F. Perry Wilson, Gary V. Désir +14 more

Sputum alarmins delineate distinct T2 cytokine pathways and unique subtypes of patients with asthma

Allergy(2023)10.1111/all.15915

N/A

0DataRank · unranked

4 citations

J Chu, Avi J. Cohen, Ravdeep Kaur, Seohyuk Lee, Gabriella Wilson +8 more

Decreased miR-24-3p potentiates DNA damage responses and increases susceptibility to COPD

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.22.108688

N/A

0DataRank · unranked

2 citations

Feng Wan, Eric Finnemore, Willy Roque, Sojin Kim, Isabel Bazán +13 more

Activated sputum eosinophils associated with exacerbations in children on mepolizumab

Journal of Allergy and Clinical Immunology(2024)10.1016/j.jaci.2024.01.031

N/A

0DataRank · unranked

34 citations

James Knight, Qing Liu, Ashish Shelar, Emma Stewart, Xiaomei Wang +16 more

Biomarkers and molecular endotypes of sarcoidosis: lessons from omics and non-omics studies

Frontiers in Immunology(2024)10.3389/fimmu.2023.1342429

N/A

0DataRank · unranked

13 citations

Nan Mile S. Xi, Chandra Mohan, Xiting Yan, Krishan Gopal Jain, Qun S. Zang +3 more

Predicting lung aging using scRNA-Seq data

PLoS Computational Biology(2024)10.1371/journal.pcbi.1012632

N/A

0DataRank · unranked

2 citations

A Singh, John E. McDonough, Taylor Adams, Robin Vos, Ruben De Man +10 more

Regulation and characterization of tumor-infiltrating immune cells in breast cancer

International Immunopharmacology(2020)10.1016/j.intimp.2020.107167

N/A

0DataRank · unranked

29 citations

Weimiao Wu, Amei Amei, Xiting Yan, Lingeng Lu, Zuoheng Wang +1 more

Integrative Single-Cell RNA and ATAC Sequencing Reveals the Impact of Chronic Cigarette Smoking on Lung Epithelial Responses to Influenza and Hyperoxia

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.06.647429

N/A

0DataRank · unranked

0 citations

Zhenyang Zou, Jessica Nouws, Charles S. Dela Cruz, Lokesh Kumar Sharma, Xiting Yan +2 more

A novel Bayesian framework for harmonizing information across tissues and studies to increase cell type deconvolution accuracy

Briefings in Bioinformatics(2023)10.1093/bib/bbac616

N/A

0DataRank · unranked

0 citations

Bolun Li, Jiawei Wang, Wei Jiang, Xiting Yan, Ningshan Li +5 more

G2S3: a gene graph-based imputation method for single-cell RNA sequencing data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.01.020586

N/A

0DataRank · unranked

3 citations

Qile Dai, Yunqing Liu, Xiting Yan, Zuoheng Wang, Weimiao Wu

Single-cell multi-omics reveals dyssynchrony of the innate and adaptive immune system in progressive COVID-19

Nature Communications(2022)10.1038/s41467-021-27716-4

N/A

0DataRank · unranked

188 citations

Tomokazu S. Sumida, Nima Nouri, Xiting Yan, Amy Zhao, Victor Gasque +47 more

iDESC: Identifying differential expression in single-cell RNA sequencing data with multiple subjects

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.07.479293

N/A

0DataRank · unranked

1 citations

Ningya Wang, Taylor Adams, Jonas C. Schupp, Weimiao Wu, John E. McDonough +5 more

Noninvasive determinants of pulmonary hypertension in interstitial lung disease

Pulmonary Circulation(2023)10.1002/pul2.12197

N/A

0DataRank · unranked

29 citations

Stella Savarimuthu, Jiayi Zhao, Xiting Yan, Hannah T. Oakland, Marjorie Cullinan +3 more

Xiting Yan

Indexed papers

Top data-sharing exemplar

Papers