Benjamin J. Lengerich

Computer ScienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 14 papers. Top paper: “Opportunities and obstacles for deep learning in biology and medicine”.

Opportunities and obstacles for deep learning in biology and medicine

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/142760

N/A

11.2DataRank · unranked

310 citations

Daniel S. Himmelstein, Brett K. Beaulieu‐Jones, Alexandr A. Kalinin, Brian T. Do, Gregory P. Way +31 more

Opportunities and obstacles for deep learning in biology and medicine

Journal of The Royal Society Interface(2018)10.1098/rsif.2017.0387

N/A

1.2DataRank · unranked

2203 citations

Daniel S. Himmelstein, Brett K. Beaulieu‐Jones, Alexandr A. Kalinin, Brian T. Do, Gregory P. Way +31 more

Ten quick tips for deep learning in biology

PLOS Computational Biology(2022)10.1371/journal.pcbi.1009803

N/A

0.550DataRank · unranked

38 citations

Anthony Gitter, Casey S. Greene, Sebastian Raschka, Finlay Maguire, Alexander J. Titus +16 more

Integrating single-cell RNA-seq datasets with substantial batch effects

BMC Genomics(2025)10.1186/s12864-025-12126-3

N/A

0.294DataRank · unranked

5 citations

Amir Ali Moinfar, Luke Zappia, Shrey Parikh, Alejandro Tejada-Lapuerta, Benjamin J. Lengerich +3 more

Contextualized: Heterogeneous Modeling Toolbox

Journal of Open Source Software(2024)10.21105/joss.06469

N/A

0.241DataRank · unranked

4 citations

Benjamin J. Lengerich, Wesley Lo, Aaron Alvarez, Andrea Rubbi, Sharon L. R. Kardia +4 more

Death by Round Numbers: Glass-Box Machine Learning Uncovers Biases in Medical Practice

medRxiv(2022)10.1101/2022.04.30.22274520

N/A

0.224DataRank · unranked

3 citations

Rich Caruana, Mark E. Nunnally, Sharon L. R. Kardia, Benjamin J. Lengerich

Contextualized Machine Learning

arXiv (Cornell University)(2023)10.48550/arxiv.2310.11340

N/A

0.223DataRank · unranked

3 citations

Caleb N. Ellington, Andrea Rubbi, Sharon L. R. Kardia, Eric P. Xing, Benjamin J. Lengerich

LLMs Understand Glass-Box Models, Discover Surprises, and Suggest Repairs

arXiv (Cornell University)(2023)10.48550/arxiv.2308.01157

N/A

0.191DataRank · unranked

2 citations

Sebastian Bordt, Harsha Nori, Mark E. Nunnally, Yindalon Aphinyanaphongs, Sharon L. R. Kardia +2 more

NOTMAD: Estimating Bayesian Networks with Sample-Specific Structures and Parameters

arXiv (Cornell University)(2021)10.48550/arxiv.2111.01104

N/A

0.104DataRank · unranked

1 citations

Caleb N. Ellington, Bryon Aragam, Eric P. Xing, Sharon L. R. Kardia, Benjamin J. Lengerich

Learning to estimate sample-specific transcriptional networks for 7,000 tumors

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2411930122

N/A

0DataRank · unranked

0 citations

Benjamin J. Lengerich, Thomas B. K. Watkins, Jiekun Yang, Abhinav K Adduri, Sazan Mahbub +6 more

Discriminative Subtyping of Lung Cancers from Histopathology Images via Contextual Deep Learning

medRxiv(2020)10.1101/2020.06.25.20140053

N/A

0DataRank · unranked

11 citations

Maruan Al-Shedivat, Amir Alavi, Jennifer Williams, Sami Labbaki, Eric P. Xing +1 more

Time-Varying Mortality Risk Suggests Increased Impact of Thrombosis in Hospitalized Covid-19 Patients

medRxiv(2021)10.1101/2021.12.11.21267259

N/A

0DataRank · unranked

0 citations

Mark E. Nunnally, Yindalon Aphinyanaphongs, Rich Caruana, Benjamin J. Lengerich

Automated interpretable discovery of heterogeneous treatment effectiveness: A COVID-19 case study

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104086

N/A

0DataRank · unranked

6 citations

Mark E. Nunnally, Yindalon Aphinyanaphongs, Caleb N. Ellington, Rich Caruana, Benjamin J. Lengerich

Learning to Estimate Sample-specific Transcriptional Networks for 7000 Tumors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.01.569658

N/A

0DataRank · unranked

6 citations

Benjamin J. Lengerich, Thomas B.K. Watkins, Jiekun Yang, Abhinav Adduri, Sazan Mahbub +4 more