Richard A. Young

Also affiliated with Whitehead Institute for Biomedical Research

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

10.6Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Transcriptional regulatory code of a eukaryotic genome

Nature(2004)10.1038/nature02800

Top 1%

10.6DataRank

Top 1%2201 citations

D. Benjamin Gordon, Tong Ihn Lee, Nicola J. Rinaldi, Kenzie D. Macisaac, Timothy W. Danford +21 more

Papers

Driven by 43 papers — median percentile 99. Top paper: “Transcriptional regulatory code of a eukaryotic genome”.

Transcriptional regulatory code of a eukaryotic genome

Nature(2004)10.1038/nature02800

Top 1%

10.6DataRank

Top 1%2201 citations

D. Benjamin Gordon, Tong Ihn Lee, Nicola J. Rinaldi, Kenzie D. Macisaac, Timothy W. Danford +21 more

STAG2 loss rewires oncogenic and developmental programs to promote metastasis in Ewing sarcoma

Cancer Cell(2021)10.1016/j.ccell.2021.05.007

N/A

2.7DataRank · unranked

127 citations

Gabriela Alexe, Bo Kyung A. Seong, Diana Lu, Elizabeth Hwang, Denes Hnisz +23 more

Transcriptional Regulation and Its Misregulation in Disease

Cell(2013)10.1016/j.cell.2013.02.014

N/A

1.1DataRank · unranked

1653 citations

Richard A. Young, Tong Ihn Lee

CHD7 and Runx1 interaction provides a braking mechanism for hematopoietic differentiation

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2003228117

N/A

1.1DataRank · unranked

25 citations

Hsuan-Ting Huang, Chung-Tsai Lee, Avik Choudhuri, Nicola K. Wilson, Brian J. Abraham +32 more

Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis

Cell(2011)10.1016/j.cell.2011.01.004

N/A

1.0DataRank · unranked

984 citations

Aravind Subramanian, Lee N. Lawton, Raymond H. Mak, W. Nicholas Haining, Naomi Habib +23 more

RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

Nature Genetics(2007)10.1038/ng.2007.26

N/A

0.998DataRank · unranked

772 citations

Alexander Stark, Sharon L. R. Kardia, Joung-Woo Hong, Sergei Nechaev, Karen Adelman +4 more

RNA-Mediated Feedback Control of Transcriptional Condensates

Cell(2020)10.1016/j.cell.2020.11.030

N/A

0.960DataRank · unranked

602 citations

Ozgur Oksuz, Krishna Shrinivas, Ido Sagi, Gary LeRoy, Ming Zheng +10 more

Biomolecular Condensates in the Nucleus

Trends in Biochemical Sciences(2020)10.1016/j.tibs.2020.06.007

N/A

0.937DataRank · unranked

514 citations

Alessandra Dall’Agnese, Richard A. Young, Benjamin R. Sabari

Whole-genome ChIP–chip analysis of Dorsal, Twist, and Snail suggests integration of diverse patterning processes in the Drosophila embryo

Genes & Development(2007)10.1101/gad.1509607

N/A

0.855DataRank · unranked

298 citations

Robert P. Zinzen, Alexander Stark, Sharon L. R. Kardia, Hailan Zhang, Richard A. Young +2 more

Small-Molecule RORγt Antagonists Inhibit T Helper 17 Cell Transcriptional Network by Divergent Mechanisms

Immunity(2014)10.1016/j.immuni.2014.04.004

N/A

0.844DataRank · unranked

276 citations

Nir Yosef, Jianfei Yang, Yonghui Wang, Ling Zhou, Chen Zhu +23 more

Cdk1 Controls Global Epigenetic Landscape in Embryonic Stem Cells

Molecular Cell(2020)10.1016/j.molcel.2020.03.010

N/A

0.723DataRank · unranked

123 citations

Joel M. Chick, Chen Chu, Aleksandra Kołodziejczyk, Yichen Wang, Jan M. Suski +24 more

Protein codes promote selective subcellular compartmentalization

Science(2025)10.1126/science.adq2634

N/A

0.675DataRank · unranked

89 citations

Itamar Chinn, Peter G. Mikhael, Ilan Mitnikov, Catherine Van Dongen, G Zylberberg +7 more

SARS-CoV-2 RNA reverse-transcribed and integrated into the human genome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.12.422516

N/A

0.637DataRank · unranked

69 citations

Alexsia Richards, Andrew Khalil, Emile Wogram, Haiting Ma, Richard A. Young +2 more

PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes

Genes & Development(2017)10.1101/gad.295857.117

N/A

0.617DataRank · unranked

60 citations

Jordan M.E. Bartlebaugh, Yunpeng Liu, Arjun J. Bhutkar, Abraham S. Weintraub, Jason D. Buenrostro +9 more

Oncogenic CDK13 mutations impede nuclear RNA surveillance

Science(2023)10.1126/science.abn7625

N/A

0.617DataRank · unranked

60 citations

Brian J. Abraham, Sara J. Dubbury, Ines H. Kaltheuner, Sofia Dust, Constance Wu +20 more

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons

Neuron(2024)10.1016/j.neuron.2024.04.007

N/A

0.609DataRank · unranked

57 citations

Anthony Flamier, George W. Bell, Annette J. Diao, Troy W. Whitfield, Hao‐Che Wang +10 more

Common variants in signaling transcription-factor-binding sites drive phenotypic variability in red blood cell traits

Nature Genetics(2020)10.1038/s41588-020-00738-2

N/A

0.587DataRank · unranked

49 citations

Eirini Trompouki, Brian J. Abraham, Leandro M. Colli, Kian Hong Kock, William Mallard +28 more

Proteolethargy is a pathogenic mechanism in chronic disease

Cell(2024)10.1016/j.cell.2024.10.051

N/A

0.494DataRank · unranked

26 citations

Ming Zheng, Shannon Moreno, Jesse M. Platt, An T. Hoang, Deepti Kannan +10 more

Targeting transcription in heart failure via CDK7/12/13 inhibition

Nature Communications(2022)10.1038/s41467-022-31541-8

N/A

0.425DataRank · unranked

16 citations

Qiming Duan, Daniel S. Day, Xin Luo, Sarah McMahon, Yu Huang +13 more

Protein codes and mobility together shape cellular function and disease

Trends in Biochemical Sciences(2025)10.1016/j.tibs.2025.10.009

N/A

0.165DataRank · unranked

2 citations

Shannon Moreno, Richard A. Young, Henry R. Kilgore

A nuclear receptor facilitates differentiation of human PSCs into more mature hepatocytes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.24.485641

N/A

0.104DataRank · unranked

1 citations

Esmée de Zwaan, Yang Guo, Paloma Cejas, Prathapan Thiru, Martijn van de Bunt +12 more

Cell-specific transcriptional control of mitochondrial metabolism by TIF1γ drives erythropoiesis

Science(2021)10.1126/science.aaz2740

N/A

0DataRank · unranked

49 citations

Karen Hoi, Victoria Chan, Brian J. Abraham, Song Yang, James Mullahoo +23 more

Targeted brachyury degradation disrupts a highly specific autoregulatory program controlling chordoma cell identity

Cell Reports Medicine(2021)10.1016/j.xcrm.2020.100188

N/A

0DataRank · unranked

39 citations

Alessandra Dall’Agnese, Woojun D. Park, Md Shamim, Julien Dubrulle, Hannah L. Johnson +14 more

Genetic variation associated with condensate dysregulation in disease

Developmental Cell(2022)10.1016/j.devcel.2022.06.010

N/A

0DataRank · unranked

105 citations

Lena K. Afeyan, Susana Wilson Hawken, Jonathan E. Henninger, Alessandra Dall’Agnese, Victoria Clark +7 more

The dynamic clustering of insulin receptor underlies its signaling and is disrupted in insulin resistance

Nature Communications(2022)10.1038/s41467-022-35176-7

N/A

0DataRank · unranked

47 citations

Jesse M. Platt, Ming Zheng, Max Friesen, Giuseppe Dall’Agnese, Alyssa M. Blaise +15 more

Reverse-transcribed SARS-CoV-2 RNA can integrate into the genome of cultured human cells and can be expressed in patient-derived tissues

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2105968118

N/A

0DataRank · unranked

301 citations

Alexsia Richards, M. Inmaculada Barrasa, Stephen H. Hughes, Richard A. Young, Rudolf Jaenisch +1 more

Transcription factors interact with RNA to regulate genes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.27.509776

N/A

0DataRank · unranked

23 citations

Jonathan E. Henninger, Robert Warneford-Thomson, Ming Zheng, Hailey Erb, Kalon J. Overholt +11 more

Cellular Maturation of Oligodendrocytes is Governed by Transient Gene Melting

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.17.516981

N/A

0DataRank · unranked

2 citations

Tyler E. Miller, Andrew R. Morton, Marissa A. Scavuzzo, Matthew S. Elitt, Benjamin L.L. Clayton +10 more

STAT3 cooperates with the core transcriptional regulatory circuitry to drive MYC expression and oncogenesis in anaplastic large cell lymphoma

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.31.506044

N/A

0DataRank · unranked

1 citations

Shuning He, Alla Berezovskaya, Adam D. Durbin, Neekesh V. Dharia, Kimberly Stegmaier +10 more

Transcription factors interact with RNA to regulate genes

Molecular Cell(2023)10.1016/j.molcel.2023.06.012

N/A

0DataRank · unranked

266 citations

Jonathan E. Henninger, Robert Warneford-Thomson, Ming Zheng, Hailey Erb, Adrienne Vancura +12 more

Distinct chemical environments in biomolecular condensates

Nature Chemical Biology(2023)10.1038/s41589-023-01432-0

N/A

0DataRank · unranked

108 citations

Peter G. Mikhael, Kalon J. Overholt, Ann Boija, Nancy M. Hannett, Catherine Van Dongen +5 more

Bat pluripotent stem cells reveal unusual entanglement between host and viruses

Cell(2023)10.1016/j.cell.2023.01.011

N/A

0DataRank · unranked

60 citations

Arturo Marín, Graham M. Hughes, Ariadna E. Morales, Carlos Godoy-Parejo, Jonathan L. Gray +20 more

Biomolecular Condensates and Cancer

Cancer Cell(2021)10.1016/j.ccell.2020.12.003

N/A

0DataRank · unranked

340 citations

Isaac A. Klein, Richard A. Young, Ann Boija

Regulatory architecture of housekeeping genes is driven by promoter assemblies

Cell Reports(2023)10.1016/j.celrep.2023.112505

N/A

0DataRank · unranked

52 citations

Alessandra Dall’Agnese, Mahesh Ramamoorthy, Jesse M. Platt, Xing Yin, Megan S. Hogan +7 more

Genetic predisposition to neuroblastoma results from a regulatory polymorphism that promotes the adrenergic cell state

Journal of Clinical Investigation(2023)10.1172/jci166919

N/A

0DataRank · unranked

13 citations

Hui Shi, Ting Tao, Derek A. Oldridge, Adam D. Durbin, Brian J. Abraham +10 more

Regulatory architecture of cell identity genes and housekeeping genes

Trends in Cell Biology(2023)10.1016/j.tcb.2023.08.007

N/A

0DataRank · unranked

6 citations

Richard A. Young, Alessandra Dall’Agnese

Retinoic acid rewires the adrenergic core regulatory circuitry of childhood neuroblastoma

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.23.218834

N/A

0DataRank · unranked

5 citations

Adam D. Durbin, Shuning He, Felix Oppel, Hui Shi, Ting Tao +8 more

LIN28B regulates transcription and potentiates MYCN-induced neuroblastoma through binding to ZNF143 at target gene promotors

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1922692117

N/A

0DataRank · unranked

65 citations

Hui Shi, Luca Mariani, Brian J. Abraham, Adam D. Durbin, Mark W. Zimmerman +9 more

Partitioning of cancer therapeutics in nuclear condensates

Science(2020)10.1126/science.aaz4427

N/A

0DataRank · unranked

528 citations

Ann Boija, Lena K. Afeyan, Susana Wilson Hawken, Mengyang Fan, Alessandra Dall’Agnese +27 more

CRISPR-Cas13d functional transcriptomics reveals widespread isoform-selective cancer dependencies on lncRNAs

Blood(2025)10.1182/blood.2025028746

N/A

0DataRank · unranked

5 citations

Anıl Aktaş Samur, Domenico Maisano, Claire Gao, Vanessa Favasuli, Dimitrios Papaioannou +17 more

Transient gene melting governs the timing of oligodendrocyte maturation

Cell(2025)10.1016/j.cell.2025.07.039

N/A

0DataRank · unranked

3 citations

Jesse J. Zhan, Andrew R. Morton, Erin F. Cohn, Marissa A. Scavuzzo, A. Nikhil +16 more

Retinoic acid rewires the adrenergic core regulatory circuitry of childhood neuroblastoma

Science Advances(2021)10.1126/sciadv.abe0834

N/A

0DataRank · unranked

65 citations

Adam D. Durbin, Shuning He, Felix Oppel, Hui Shi, Ting Tao +8 more

MeCP2 links heterochromatin condensates and neurodevelopmental disease

Nature(2020)10.1038/s41586-020-2574-4

N/A

0DataRank · unranked

206 citations

Eliot L. Coffey, Alessandra Dall’Agnese, Nancy M. Hannett, Xin Tang, Jonathan E. Henninger +15 more

Richard A. Young

Indexed papers

Top data-sharing exemplar

Papers