🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Nicole Redaschi

SIB Swiss Institute of Bioinformatics

ORCID: 0000-0001-8890-2268
Biochemistry, Genetics and Molecular BiologyDecision SciencesChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
37.5Author DataRank

Indexed papers

11in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 11 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

UniProt: the universal protein knowledgebase in 2021

Nucleic Acids Research(2020)10.1093/nar/gkaa1100
Top 1%
10.8DataRank
Top 1%7078 citations

María Martin, Sandra Orchard, Michele Magrane, Rahat Agivetova, Shadab Ahmad +94 more

Papers

Driven by 16 papers — median percentile 88. Top paper: “UniProt: the universal protein knowledgebase in 2021”.

UniProt: the universal protein knowledgebase in 2021

Nucleic Acids Research(2020)10.1093/nar/gkaa1100
Top 1%
10.8DataRank
Top 1%7078 citations

María Martin, Sandra Orchard, Michele Magrane, Rahat Agivetova, Shadab Ahmad +94 more

UniProt: the Universal Protein Knowledgebase in 2023

Nucleic Acids Research(2022)10.1093/nar/gkac1052
Top 2%
7.8DataRank
Top 2%7147 citations

María Martin, Sandra Orchard, Michele Magrane, Shadab Ahmad, Emanuele Alpi +95 more

The UniProtKB guide to the human proteome

Database(2016)10.1093/database/bav120
Top 4%
5.7DataRank
Top 4%182 citations

Sylvain Poux, Anne Estreicher, Maria Livia Famiglietti, Michele Magrane, Michael Tognolli +4 more

UniProt: the Universal Protein Knowledgebase in 2025

Nucleic Acids Research(2024)10.1093/nar/gkae1010
Top 5%
4.6DataRank
Top 5%2086 citations

María Martin, Sandra Orchard, Michele Magrane, Aduragbemi S. Adesina, Shadab Ahmad +94 more

Annotation of biologically relevant ligands in UniProtKB using ChEBI

Bioinformatics(2022)10.1093/bioinformatics/btac793
Top 6%
4.0DataRank
Top 6%325 citations

Sébastien Géhant, Edouard de Castro, Monica Pozzato, Delphine Baratin, Teresa Batista Neto +87 more

Annotation of biologically relevant ligands in UniProtKB using ChEBI

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.19.504519
Top 12%
1.7DataRank
Top 12%67 citations

Sébastien Géhant, Edouard de Castro, Monica Pozzato, Delphine Baratin, Teresa Batista Neto +4 more

The UniProt website API: facilitating programmatic access to protein knowledge

Nucleic Acids Research(2025)10.1093/nar/gkaf394
Top 17%
1.2DataRank
Top 17%153 citations

Leonardo Jose da Costa Gonzales, Emily Bowler-Barnett, Daniel L Rice, Minjoon Kim, Supun Wijerathne +85 more

SPARQL-enabled identifier conversion with Identifiers.org

Bioinformatics(2015)10.1093/bioinformatics/btv064
N/A
1.1DataRank · unranked
14 citations

Jerven T. Bolleman, Nick Juty, Toshiaki Katayama, Michel J. Dumontier, Nicole Redaschi +4 more

EnzChemRED, a rich enzyme chemistry relation extraction dataset

Scientific Data(2024)10.1038/s41597-024-03835-7
Top 21%
0.945DataRank
Top 21%11 citations

Elisabeth Coudert, Lucila Aimo, Kristian B. Axelsen, Lionel Breuza, Edouard de Castro +14 more

Diverse Taxonomies for Diverse Chemistries: Enhanced Representation of Natural Product Metabolism in UniProtKB

Metabolites(2021)10.3390/metabo11010048
Top 59%
0.263DataRank
Top 59%3 citations

Emmanuel Boutet, Anne Morgat, Kristian B. Axelsen, Parit Bansal, Jerven T. Bolleman +13 more

Perspectives on tracking data reuse across biodata resources

Bioinformatics Advances(2024)10.1093/bioadv/vbae057
N/A
0.224DataRank · unranked
2 citations

Frederic Bastian, M.H. Buys, Charles E. Cook, Peter D’Eustachio, Melissa Harrison +94 more

A large collection of bioinformatics question-query pairs over federated knowledge graphs: methodology and applications

arXiv (Cornell University)(2024)10.48550/arxiv.2410.06010
Top 70%
0.165DataRank
Top 70%2 citations

Vincent Emonet, Adrian Altenhoff, Amos Bairoch, Marie-Claude Blatter, Alan Bridge +12 more

MBDBMetrics: an online metrics tool to measure the impact of biological data resources

Bioinformatics Advances(2023)10.1093/bioadv/vbad180
Top 70%
0.159DataRank
Top 70%1 citations

Alexandr Ignatchenko, María Martin, Alex Bateman, Sandra Orchard, Michele Magrane +88 more

Computational Strategies to Combat COVID-19: Useful Tools to Accelerate SARS-CoV-2 and Coronavirus Research

Preprints.org(2020)10.20944/preprints202005.0376.v1
N/A
0DataRank · unranked
19 citations

Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman +50 more

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research

Briefings in Bioinformatics(2020)10.1093/bib/bbaa232
N/A
0DataRank · unranked
149 citations

Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman +50 more

A large collection of bioinformatics question–query pairs over federated knowledge graphs: methodology and applications

GigaScience(2025)10.1093/gigascience/giaf045
N/A
0DataRank · unranked
3 citations

Vincent Emonet, Adrian Altenhoff, Amos Bairoch, Marie-Claude Blatter, Alan Bridge +12 more