A. Murat Eren

Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung

Also affiliated with Carl von Ossietzky Universität Oldenburg, Marine Biological Laboratory, Helmholtz Institute for Functional Marine Biodiversity, Max Planck Institute for Marine Microbiology

Biochemistry, Genetics and Molecular BiologySocial SciencesEnergy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

9.5Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Accurate and complete genomes from metagenomes

Genome Research(2020)10.1101/gr.258640.119

Top 3%

5.9DataRank

Top 3%407 citations

Karthik Anantharaman, Alon Shaiber, A. Murat Eren, Jillian F. Banfield, Lin-Xing Chen

Papers

Driven by 33 papers — median percentile 88. Top paper: “Accurate and complete genomes from metagenomes”.

Accurate and complete genomes from metagenomes

Genome Research(2020)10.1101/gr.258640.119

Top 3%

5.9DataRank

Top 3%407 citations

Karthik Anantharaman, Alon Shaiber, A. Murat Eren, Jillian F. Banfield, Lin-Xing Chen

Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome

Genome biology(2020)10.1186/s13059-020-02195-w

N/A

4.4DataRank · unranked

261 citations

Amy D. Willis, Tom O. Delmont, Simon Roux, Lin-Xing Chen, Abigail C. Schmid +11 more

Metapangenomics of the oral microbiome provides insights into habitat adaptation and cultivar diversity

Genome biology(2020)10.1186/s13059-020-02200-2

Top 10%

2.1DataRank

Top 10%91 citations

Gary G. Borisy, A. Murat Eren, Colleen M. Cavanaugh, Jessica L. Mark Welch, Daniel R. Utter

Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration

Nature Microbiology(2024)10.1038/s41564-023-01560-2

N/A

1.7DataRank · unranked

74 citations

Isaac T. Younker, Matthew S. Schechter, Paola Nol Bernardino, Raphaël Méheust, Joshua Stemczynski +17 more

A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome

Nature Communications(2022)10.1038/s41467-022-34853-x

Top 14%

1.5DataRank

Top 14%52 citations

Alexander Lemenze, Emily C. Fogarty, Avi Shah, Courtney Grady, Aubrey R. Odom-Mabey +7 more

Metabolic independence drives gut microbial colonization and resilience in health and disease

Genome biology(2023)10.1186/s13059-023-02924-x

N/A

0.697DataRank · unranked

103 citations

Jessika Füssel, Iva Veseli, Johanna Zaal DeLongchamp, Marisela Silva, Florian Trigodet +15 more

Microbes with higher metabolic independence are enriched in human gut microbiomes under stress

eLife(2023)10.7554/elife.89862

N/A

0.679DataRank · unranked

27 citations

Yiqun T. Chen, Matthew S. Schechter, Chiara Vanni, Emily C. Fogarty, Andrea R. Watson +8 more

Bile acid fitness determinants of a Bacteroides fragilis isolate from a human pouchitis patient

mBio(2023)10.1128/mbio.02830-23

N/A

0.528DataRank · unranked

17 citations

Matthew K. Schnizlein, Selymar Pena-Rivera, Florian Trigodet, Abhishek Anil Dubey, Miette Hennessy +9 more

Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.29.069278

N/A

0.449DataRank · unranked

19 citations

Amy D. Willis, Tom O. Delmont, Simon Roux, Lin-Xing Chen, Abigail C. Schmid +11 more

Microbes with higher metabolic independence are enriched in human gut microbiomes under stress

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.10.540289

N/A

0.425DataRank · unranked

16 citations

Yiqun T. Chen, Matthew S. Schechter, Chiara Vanni, Emily C. Fogarty, Andrea R. Watson +8 more

Quantitative insights into the efficacy of genome-resolved surveys of microbial communities through ribosomal protein phylogeography and EcoPhylo

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.15.633187

N/A

0.264DataRank · unranked

3 citations

Florian Trigodet, Iva Veseli, Samuel Miller, Ronald Klein, Metehan Sever +5 more

tRNA modification dynamics from individual organisms to metaepitranscriptomics of microbiomes

Molecular Cell(2022)10.1016/j.molcel.2021.12.007

N/A

0DataRank · unranked

136 citations

Marcus Foo, A. Murat Eren, Tao Pan, Wen Zhang

High molecular weight DNA extraction strategies for long-read sequencing of complex metagenomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.03.433801

N/A

0DataRank · unranked

9 citations

Karen Lolans, Emily C. Fogarty, Alon Shaiber, Hilary G. Morrison, Luis B. Barreiro +3 more

Guts of the Urban Ecosystem: Microbial Ecology of Sewer Infrastructure

mSystems(2022)10.1128/msystems.00118-22

N/A

0DataRank · unranked

42 citations

Ryan J. Newton, A. Murat Eren, Sandra L. McLellan, Adélaïde Roguet

A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.15.500236

Top 100%

0DataRank

Top 100%0 citations

Alexander Lemenze, Emily C. Fogarty, Avi Shah, Courtney Grady, Aubrey R. Odom-Mabey +7 more

Metabolic independence drives gut microbial colonization and resilience in health and disease

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.02.433653

N/A

0DataRank · unranked

34 citations

Jessika Füssel, Iva Veseli, Johanna Zaal DeLongchamp, Marisela Silva, Florian Trigodet +15 more

Microbial-enrichment method enables high-throughput metagenomic characterization from host-rich samples

Nature Methods(2023)10.1038/s41592-023-02025-4

N/A

0DataRank · unranked

36 citations

Jacob T. Barlow, Florian Trigodet, Dustin G. Shaw, Anna E. Romano, Bana Jabrì +3 more

Early-Life Microbial Restitution Reduces Colitis Risk Promoted by Antibiotic-Induced Gut Dysbiosis in Interleukin 10–/– Mice

Gastroenterology(2021)10.1053/j.gastro.2021.05.054

N/A

0DataRank · unranked

46 citations

Sawako Miyoshi, Tom O. Delmont, Candace M. Cham, Sonny T. M. Lee, Aki Sakatani +12 more

Interferon inducible pseudouridine modification in human mRNA by quantitative nanopore profiling

Genome biology(2021)10.1186/s13059-021-02557-y

N/A

0DataRank · unranked

117 citations

Wen Zhang, Christopher D. Katanski, Devin Dersh, Qing Dai, Karen Lolans +4 more

STRONG: metagenomics strain resolution on assembly graphs

Genome biology(2021)10.1186/s13059-021-02419-7

N/A

0DataRank · unranked

123 citations

Sergey Nurk, Sébastien Raguideau, Robert James, Orkun S. Soyer, J. Kimberley Summers +5 more

Microbes with higher metabolic independence are enriched in human gut microbiomes under stress

(2023)10.7554/elife.89862.1

N/A

0DataRank · unranked

10 citations

Yiqun T. Chen, Matthew S. Schechter, Chiara Vanni, Emily C. Fogarty, Andrea R. Watson +8 more

A highly conserved and globally prevalent cryptic plasmid is among the most numerous mobile genetic elements in the human gut

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.25.534219

N/A

0DataRank · unranked

6 citations

Matthew S. Schechter, Karen Lolans, Madeline L. Sheahan, Iva Veseli, Ryan M. Moore +11 more

Reviewer #2 (Public Review): Microbes with higher metabolic independence are enriched in human gut microbiomes under stress

(2023)10.7554/elife.89862.1.sa1

N/A

0DataRank · unranked

0 citations

Yiqun T. Chen, Matthew S. Schechter, Chiara Vanni, Emily C. Fogarty, Andrea R. Watson +8 more

Reviewer #1 (Public Review): Microbes with higher metabolic independence are enriched in human gut microbiomes under stress

(2023)10.7554/elife.89862.1.sa2

N/A

0DataRank · unranked

0 citations

Yiqun T. Chen, Matthew S. Schechter, Chiara Vanni, Emily C. Fogarty, Andrea R. Watson +8 more

Untangling the Role of Pathobionts from Bacteroides Species in Inflammatory Bowel Diseases

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.29.564605

N/A

0DataRank · unranked

0 citations

Joash Lake, Candace M. Cham, Mingming Zhu, Deepinder Kaur, Daina L. Ringus +17 more

Early-life microbial intervention reduces colitis risk promoted by antibiotic-induced gut dysbiosis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.11.987412

N/A

0DataRank · unranked

2 citations

Sawako Miyoshi, Tom O. Delmont, Candace M. Cham, Sonny T. M. Lee, Aki Sakatani +11 more

Diverse plasmid systems and their ecology across human gut metagenomes revealed by PlasX and MobMess

Nature Microbiology(2024)10.1038/s41564-024-01610-3

N/A

0DataRank · unranked

64 citations

Emily C. Fogarty, A. Murat Eren, Michael Yu

A cryptic plasmid is among the most numerous genetic elements in the human gut

Cell(2024)10.1016/j.cell.2024.01.039

N/A

0DataRank · unranked

62 citations

Matthew S. Schechter, Karen Lolans, Madeline L. Sheahan, Iva Veseli, Ryan M. Moore +13 more

Modern microbiology: Embracing complexity through integration across scales

Cell(2024)10.1016/j.cell.2024.08.028

N/A

0DataRank · unranked

54 citations

Jillian F. Banfield, A. Murat Eren

Antibiotic‐Induced Gut Microbiota Dysbiosis Modulates Host Transcriptome and m6A Epitranscriptome via Bile Acid Metabolism

Advanced Science(2024)10.1002/advs.202307981

N/A

0DataRank · unranked

43 citations

Xiaoqi Zheng, Jiajun Fan, Wei Cheng, Tong‐Meng Yan, Yushan Lai +20 more

Adaptive adjustment of significance thresholds produces large gains in microbial gene annotations and metabolic insights

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.03.601779

N/A

0DataRank · unranked

0 citations

Iva Veseli, Carlos A. Perez, Samuel Miller, A. Murat Eren, Patrick H. Bradley +1 more

Microbes with higher metabolic independence are enriched in human gut microbiomes under stress

eLife(2025)10.7554/elife.89862.3

N/A

0DataRank · unranked

6 citations

Yiqun T. Chen, Matthew S. Schechter, Chiara Vanni, Emily C. Fogarty, Andrea R. Watson +8 more

Metapangenomics of the oral microbiome provides insights into habitat adaptation and cultivar diversity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.01.072496

N/A

0DataRank · unranked

6 citations

Gary G. Borisy, A. Murat Eren, Colleen M. Cavanaugh, Jessica L. Mark Welch, Daniel R. Utter

A. Murat Eren

Indexed papers

Top data-sharing exemplar

Papers