🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Pavel V. Baranov

University College Cork

ORCID: 0000-0001-9017-0270
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
3.5Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Standardized annotation of translated open reading frames

Nature Biotechnology(2022)10.1038/s41587-022-01369-0
Top 7%
3.2DataRank
Top 7%252 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis +31 more

Papers

Driven by 20 papers — median percentile 70. Top paper: “Novel Ciliate Genetic Code Variants Including the Reassignment of All Three Stop Codons to Sense Codons inCondylostoma magnum”.

Novel Ciliate Genetic Code Variants Including the Reassignment of All Three Stop Codons to Sense Codons inCondylostoma magnum

Molecular Biology and Evolution(2016)10.1093/molbev/msw166
N/A
3.7DataRank · unranked
118 citations

Marco Mariotti, Vadim N. Gladyshev, John F. Atkins, Pavel V. Baranov, Stephen M. Heaphy

eIF2α controls memory consolidation via excitatory and somatostatin neurons

Nature(2020)10.1038/s41586-020-2805-8
N/A
3.3DataRank · unranked
144 citations

Rapita Sood, Abdessattar Khlaifia, Mohammad J. Eslamizade, Tzu-Yu Hung, Danning Lou +25 more

Standardized annotation of translated open reading frames

Nature Biotechnology(2022)10.1038/s41587-022-01369-0
Top 7%
3.2DataRank
Top 7%252 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis +31 more

Position-dependent termination and widespread obligatory frameshifting in Euplotes translation

Nature Structural & Molecular Biology(2017)10.1038/nsmb.3330
N/A
1.9DataRank · unranked
67 citations

Stephen M Heaphy, Anton A Turanov, Maxim V Gerashchenko, Sandra Pucciarelli, Raghul R Devaraj +10 more

Evidence of efficient stop codon readthrough in four mammalian genes

Nucleic Acids Research(2014)10.1093/nar/gku608
N/A
0.827DataRank · unranked
247 citations

Ming-Yuan Chou, Ivaylo P. Ivanov, Irwin Jungreis, Sharon L. R. Kardia, Pavel V. Baranov +3 more

A community-driven roadmap to advance research on translated open reading frames detected by Ribo-seq

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.10.447896
N/A
0.759DataRank · unranked
22 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Jose Manuel Gonzalez, Michele Magrane +23 more

Translon: a single term for translated regions

Nature Methods(2025)10.1038/s41592-025-02810-3
N/A
0.389DataRank · unranked
11 citations

Jack A. S. Tierney, M. Mar Albà, Dmitry E. Andreev, Julie L. Aspden, John F. Atkins +164 more

Polysomes Bypass a 50-Nucleotide Coding Gap Less Efficiently Than Monosomes Due to Attenuation of a 5′ mRNA Stem–Loop and Enhanced Drop-off

Journal of Molecular Biology(2020)10.1016/j.jmb.2020.05.010
N/A
0.345DataRank · unranked
9 citations

Mark C. Capece, Mariia Klimova, Norma M. Wills, Arthur Coakley, Ekaterina Samatova +8 more

An expanded reference catalog of translated open reading frames for biomedical research

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.03.662928
Top 53%
0.319DataRank
Top 53%7 citations

Jorge Ruiz-Orera, Jack A. S. Tierney, Jim Clauwaert, Eric W. Deutsch, M. Mar Albà +41 more

Programmed ribosomal frameshifting during PLEKHM2 mRNA decoding generates a constitutively active proteoform that supports myocardial function

Science Advances(2025)10.1126/sciadv.ady1742
N/A
0.208DataRank · unranked
3 citations

Raffaella De Pace, Ningyu Ding, Jianchao Zhang, Irwin Jungreis, Gionmattia Carancini +10 more

Evaluating ribosomal frameshifting in CCR5 mRNA decoding.

Apollo (University of Cambridge)(2022)10.17863/cam.126879
N/A
0DataRank · unranked
0 citations

Loughran, Gary, Steckelberg, Anna-Lena, Brown, Katherine, Kiniry, Stephen J, Stewart, Hazel +5 more

Impact of eIF2α phosphorylation on the translational landscape of mouse embryonic stem cells

Cell Reports(2023)10.1016/j.celrep.2023.113615
N/A
0DataRank · unranked
20 citations

Stephen J. Kiniry, Anthony Possemato, Niaz Mahmood, Tayebeh Basiri, Catherine R. Dufour +12 more

Ribosome Decision Graphs for the Representation of Eukaryotic RNA Translation Complexity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.10.566564
N/A
0DataRank · unranked
4 citations

Michał I. Świrski, Håkon Tjeldnes, Jonathan M. Mudge, Joanna Kufel, Nicola Whiffin +3 more

Ribosome decision graphs for the representation of eukaryotic RNA translation complexity

Genome Research(2024)10.1101/gr.278810.123
N/A
0DataRank · unranked
5 citations

Michał I. Świrski, Håkon Tjeldnes, Jonathan M. Mudge, Joanna Kufel, Nicola Whiffin +3 more

Programmed ribosomal frameshifting during PLEKHM2 mRNA decoding generates a constitutively active proteoform that supports myocardial function

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.30.610563
N/A
0DataRank · unranked
1 citations

Raffaella De Pace, Ningyu Ding, Jianchao Zhang, Irwin Jungreis, Gionmattia Carancini +10 more

Triple coding in human SRD5A1 mRNA

Research Square(2024)10.21203/rs.3.rs-5390104/v1
N/A
0DataRank · unranked
0 citations

Conor Slattery, Mirriam Baranova-Gurvich, Manon Engels, Oscar Ting, Michał I. Świrski +7 more

Mechanism of Ribosome Stalling by the AMD1 C-terminal Tail Arrest Peptide

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.16.688537
N/A
0DataRank · unranked
0 citations

Fabio S. Boiocchi, Michał I. Świrski, Kyle A. Meiklejohn, Martina M. Yordanova, Pavel V. Baranov +2 more

Selection shapes synonymous stop codon use in mammals

10.1101/618157
N/A
0DataRank · unranked
0 citations

Stephen J. Kiniry, Andrew Peters, Pavel V. Baranov, Haixuan Yang, Cathal Seoighe

Rocaglates Induce Gain-of-Function Alterations to eIF4A and eIF4F

Cell Reports(2020)10.1016/j.celrep.2020.02.002
N/A
0DataRank · unranked
77 citations

Wenhan Zhang, Regina Cencic, Patrick B. F. O’Connor, Françis Robert, William G. Devine +8 more

Thousands of human non-AUG extended proteoforms lack evidence of evolutionary selection among mammals

Nature Communications(2022)10.1038/s41467-022-35595-6
N/A
0DataRank · unranked
28 citations

Stephen J. Kiniry, Dmitry E. Andreev, Jonathan M. Mudge, Pavel V. Baranov, Alla D. Fedorova