Huan‐Xiang Zhou

Also affiliated with University of Chicago

Biochemistry, Genetics and Molecular BiologyMaterials SciencePhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 82 papers. Top paper: “A common pathway for detergent-assisted oligomerization of Aβ42”.

A common pathway for detergent-assisted oligomerization of Aβ42

Communications Biology(2023)10.1038/s42003-023-05556-w

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0.396DataRank · unranked

11 citations

Ramesh Prasad, Yuan Gao, Tarunya Rao Sudarshan, Alicia S. Robang, Jens O. Watzlawik +4 more

Structural Model for Self-Limiting β-strand Arrangement Within an Alzheimer’s Amyloid-β Oligomer

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.06.519347

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0.292DataRank · unranked

6 citations

Ramesh Prasad, Peter S. Randolph, Jens O. Watzlawik, Alicia S. Robang, Cong Guo +5 more

Sequence-Dependent Correlated Segments in the Intrinsically Disordered Region of ChiZ

Biomolecules(2020)10.3390/biom10060946

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0DataRank · unranked

32 citations

Cristian A. Escobar, Timothy A. Cross, Huan‐Xiang Zhou, Alan Hicks

Determinants for Fusion Speed of Biomolecular Droplets

Angewandte Chemie(2020)10.1002/ange.202006711

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0DataRank · unranked

4 citations

Huan‐Xiang Zhou, Archishman Ghosh

Sequence-dependent correlated segments in the intrinsically disordered region of ChiZ

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.22.055590

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0DataRank · unranked

2 citations

Cristian A. Escobar, Timothy A. Cross, Huan‐Xiang Zhou, Alan Hicks

Viscoelasticity of biomolecular condensates conforms to the Jeffreys model

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.27.401653

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0DataRank · unranked

2 citations

Huan‐Xiang Zhou

Membrane Association and Functional Mechanism of Synaptotagmin-1 in Triggering Vesicle Fusion

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.13.991588

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0DataRank · unranked

1 citations

Huan‐Xiang Zhou, Ramesh Prasad

A Tug of War Between Condensate Phases in a Minimal Macromolecular System

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.29.925099

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0DataRank · unranked

0 citations

Xiaojia Zhang, Huan‐Xiang Zhou, Archishman Ghosh

Out-of-register parallel β-sheets and antiparallel β-sheets coexist in 150 kDa oligomers formed by Aβ(1-42)

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.03.974394

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0DataRank · unranked

0 citations

Cong Guo, Jens O. Watzlawik, Elizabeth J. Lee, Danting Huang, Huan‐Xiang Zhou +3 more

Fusion Speed of Biomolecular Condensates

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.22.164897

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0DataRank · unranked

0 citations

Huan‐Xiang Zhou, Archishman Ghosh

Extreme Fuzzy Association of an Intrinsically Disordered Protein with Acidic Membranes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.16.299974

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0DataRank · unranked

0 citations

Cristian A. Escobar, Timothy A. Cross, Huan‐Xiang Zhou, Alan Hicks

Community-Wide Assessment of Protein-Interface Modeling Suggests Improvements to Design Methodology

UNC Libraries(2020)10.17615/35z7-9284

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0DataRank · unranked

0 citations

Thom Vreven, Şefik Kerem Ovalı, Jacob E. Corn, Eva‐Maria Strauch, Julie C. Mitchell +27 more

Shear relaxation governs fusion dynamics of biomolecular condensates

Nature Communications(2021)10.1038/s41467-021-26274-z

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0DataRank · unranked

119 citations

Divya Kota, Huan‐Xiang Zhou, Archishman Ghosh

Viscoelasticity of biomolecular condensates conforms to the Jeffreys model

The Journal of Chemical Physics(2021)10.1063/5.0038916

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46 citations

Huan‐Xiang Zhou

Macromolecular regulators have matching effects on the phase equilibrium and interfacial tension of biomolecular condensates

Protein Science(2021)10.1002/pro.4084

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18 citations

Huan‐Xiang Zhou, Konstantinos Mazarakos

Shape recovery of deformed biomolecular droplets: Dependence on condensate viscoelasticity

The Journal of Chemical Physics(2021)10.1063/5.0064247

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0DataRank · unranked

13 citations

Huan‐Xiang Zhou

Binding free energy decomposition and multiple unbinding paths of buried ligands in a PreQ1 riboswitch

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009603

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0DataRank · unranked

13 citations

Huan‐Xiang Zhou, Guodong Hu

Effects of Cholesterol on the Partitioning of a Drug Molecule in Lipid Bilayers

The Journal of Physical Chemistry B(2021)10.1021/acs.jpcb.1c02436

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0DataRank · unranked

11 citations

Hao Dong, Huan‐Xiang Zhou, Yuqin Yang

Characterizing protein kinase A (PKA) subunits as macromolecular regulators of PKA RIα liquid–liquid phase separation

The Journal of Chemical Physics(2021)10.1063/5.0049810

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0DataRank · unranked

10 citations

Sanbo Qin, Jason Z. Zhang, J. Andrew McCammon, Jin Zhang, Huan‐Xiang Zhou +1 more

A Machine Learning-Enabled Pipeline for Large-Scale Virtual Drug Screening

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.20.449177

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0DataRank · unranked

5 citations

Huan‐Xiang Zhou, Aayush Gupta

Shape Recovery of Deformed Biomolecular Droplets: Dependence on Condensate Viscoelasticity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.20.427476

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0DataRank · unranked

2 citations

Huan‐Xiang Zhou

Macromolecular Regulators Have Matching Effects on the Phase Equilibrium and Interfacial Tension of Biomolecular Condensates

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.18.431854

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0DataRank · unranked

2 citations

Huan‐Xiang Zhou, Konstantinos Mazarakos

Shear Relaxation Governs Dynamic Processes of Biomolecular Condensates

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.17.440275

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0DataRank · unranked

2 citations

Divya Kota, Huan‐Xiang Zhou, Archishman Ghosh

Artificial Intelligence Guided Conformational Mining of Intrinsically Disordered Proteins

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.21.469457

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0DataRank · unranked

2 citations

Souvik Dey, Huan‐Xiang Zhou, Aayush Gupta

Binding Free energy Decomposition and Multiple Unbinding Paths of Buried Ligands in a PreQ 1 Riboswitch

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.13.452201

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0DataRank · unranked

1 citations

Huan‐Xiang Zhou, Guodong Hu

Removing Thermostat Distortions of Protein Dynamics in Constant-Temperature Molecular Dynamics Simulations

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.08.447619

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0DataRank · unranked

0 citations

Matthew MacAinsh, Huan‐Xiang Zhou, Alan Hicks

Preferential interactions of a crowder protein with the specific binding site of a native protein complex

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.06.455410

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0DataRank · unranked

0 citations

Ling-Yun Qin, Zhou Gong, Sanbo Qin, Huan‐Xiang Zhou, Chun Tang +1 more

Artificial intelligence guided conformational mining of intrinsically disordered proteins

Communications Biology(2022)10.1038/s42003-022-03562-y

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0DataRank · unranked

59 citations

Souvik Dey, Alan Hicks, Huan‐Xiang Zhou, Aayush Gupta

Preferential Interactions of a Crowder Protein with the Specific Binding Site of a Native Protein Complex

The Journal of Physical Chemistry Letters(2022)10.1021/acs.jpclett.1c03794

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0DataRank · unranked

21 citations

Ling-Yun Qin, Zhou Gong, Sanbo Qin, Huan‐Xiang Zhou, Chun Tang +1 more

ReSMAP: Web Server for Predicting Residue-Specific Membrane-Association Propensities of Intrinsically Disordered Proteins

Membranes(2022)10.3390/membranes12080773

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0DataRank · unranked

21 citations

Alan Hicks, Souvik Dey, Ramesh Prasad, Huan‐Xiang Zhou, Sanbo Qin

Membrane Tethering of SepF, a Membrane Anchor for the Mycobacterium tuberculosis Z-ring

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167817

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0DataRank · unranked

20 citations

Huan‐Xiang Zhou, Souvik Dey

SpiDec: Computing binodals and interfacial tension of biomolecular condensates from simulations of spinodal decomposition

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.1021939

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0DataRank · unranked

10 citations

Ramesh Prasad, Huan‐Xiang Zhou, Konstantinos Mazarakos

Calculating Binodals and Interfacial Tension of Phase-Separated Condensates from Molecular Simulations with Finite-Size Corrections

Methods in molecular biology(2022)10.1007/978-1-0716-2663-4_1

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0DataRank · unranked

6 citations

Sanbo Qin, Huan‐Xiang Zhou, Konstantinos Mazarakos

Sequence-Dependent Backbone Dynamics of Intrinsically Disordered Proteins

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.11.480128

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0DataRank · unranked

2 citations

Matthew MacAinsh, Huan‐Xiang Zhou, Souvik Dey

Partial Mimicry of the Microtubule Binding of Tau by Its Membrane Binding

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.06.515359

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0DataRank · unranked

2 citations

Huan‐Xiang Zhou, Matthew MacAinsh

An Arg/Ala-Rich Helix in the N-Terminal Region of M. tuberculosis FtsQ Anchors FtsZ to Membranes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.02.506397

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0DataRank · unranked

1 citations

Cristian A. Escobar, Souvik Dey, Timothy A. Cross, Huan‐Xiang Zhou, Sean T. Smrt

Why Does Synergistic Activation of WASP, but Not N-WASP, by Cdc42 and PIP 2 Require Cdc42 Prenylation?

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.24.517863

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0DataRank · unranked

1 citations

Huan‐Xiang Zhou, Souvik Dey

Membrane Tethering of SepF, a Membrane Anchor for the Mycobacterium tuberculosis Z-ring

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.26.505433

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0DataRank · unranked

0 citations

Huan‐Xiang Zhou, Souvik Dey

Two gates mediate NMDA receptor activity and are under subunit-specific regulation

Research Square(2022)10.21203/rs.3.rs-2135981/v1

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0DataRank · unranked

0 citations

Johansen Amin, Miaomiao He, Ramesh Prasad, Xialing Leng, Huan‐Xiang Zhou +1 more

MrgprA3-expressing pruriceptors drive pruritogen-induced alloknesis through mechanosensitive Piezo2 channel

Cell Reports(2023)10.1016/j.celrep.2023.112283

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0DataRank · unranked

25 citations

Yonghui Zhao, Zili Xie, Huan‐Xiang Zhou, Xinzhong Dong, Gregory F. Wu +4 more

An Arg/Ala-rich helix in the N-terminal region of M. tuberculosis FtsQ is a potential membrane anchor of the Z-ring

Communications Biology(2023)10.1038/s42003-023-04686-5

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0DataRank · unranked

19 citations

Cristian A. Escobar, Souvik Dey, Timothy A. Cross, Huan‐Xiang Zhou, Sean T. Smrt

Two gates mediate NMDA receptor activity and are under subunit-specific regulation

Nature Communications(2023)10.1038/s41467-023-37260-y

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0DataRank · unranked

17 citations

Miaomiao He, Ramesh Prasad, Xiaoling Leng, Huan‐Xiang Zhou, Lonnie P. Wollmuth +1 more

Dimeric Transmembrane Structure of the SARS-CoV-2 E Protein

Communications Biology(2023)10.1038/s42003-023-05490-x

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0DataRank · unranked

13 citations

Huajun Qin, Ramesh Prasad, Riqiang Fu, Huan‐Xiang Zhou, Timothy A. Cross +1 more

Partial mimicry of the microtubule binding of tau by its membrane binding

Protein Science(2023)10.1002/pro.4581

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0DataRank · unranked

11 citations

Huan‐Xiang Zhou, Matthew MacAinsh

Atomistic modeling of liquid-liquid phase equilibrium explains dependence of critical temperature on γ-crystallin sequence

Communications Biology(2023)10.1038/s42003-023-05270-7

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0DataRank · unranked

9 citations

Huan‐Xiang Zhou, Sanbo Qin

Why Does Synergistic Activation of WASP, but Not N-WASP, by Cdc42 and PIP2 Require Cdc42 Prenylation?

Journal of Molecular Biology(2023)10.1016/j.jmb.2023.168035

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0DataRank · unranked

9 citations

Huan‐Xiang Zhou, Souvik Dey

N-WASP is competent for downstream signaling before full release from autoinhibition

The Journal of Chemical Physics(2023)10.1063/5.0137908

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0DataRank · unranked

7 citations

Huan‐Xiang Zhou, Souvik Dey

Power law in a bounded range: Estimating the lower and upper bounds from sample data

The Journal of Chemical Physics(2023)10.1063/5.0151614

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0DataRank · unranked

2 citations

Huan‐Xiang Zhou

Predicting the sequence-dependent backbone dynamics of intrinsically disordered proteins

eLife(2023)10.7554/elife.88958

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0DataRank · unranked

9 citations

Huan‐Xiang Zhou, Sanbo Qin

ATP Mediates Phase Separation of Disordered Basic Proteins by Bridging Intermolecular Interaction Networks

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.20.554035

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0DataRank · unranked

4 citations

Ramesh Prasad, Huan‐Xiang Zhou, Divya Kota

Multiple modes of DNA compaction by protamine

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.08.570784

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0DataRank · unranked

3 citations

Huan‐Xiang Zhou, Vikhyaat Ahlawat

Dimeric Transmembrane Structure of the SARS-CoV-2 E Protein

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.07.539752

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0DataRank · unranked

2 citations

Huajun Qin, Ramesh Prasad, Riqiang Fu, Huan‐Xiang Zhou, Timothy A. Cross +1 more

Atomistic Modeling of Liquid-Liquid Phase Equilibrium Explains Dependence of Critical Temperature on γ-Crystallin Sequence

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.25.538329

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0DataRank · unranked

1 citations

Huan‐Xiang Zhou, Sanbo Qin

Predicting the Sequence-Dependent Backbone Dynamics of Intrinsically Disordered Proteins

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.02.526886

N/A

0DataRank · unranked

0 citations

Huan‐Xiang Zhou, Sanbo Qin

Magnesium ions mediate ligand binding and conformational transition of the SAM/SAH riboswitch

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.12.532287

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0DataRank · unranked

0 citations

Huan‐Xiang Zhou, Guodong Hu

A Common Pathway for Detergent-Assisted Oligomerization of Aβ42

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.22.546091

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0DataRank · unranked

0 citations

Ramesh Prasad, Yuan Gao, Tarunya Rao Sudarshan, Alicia S. Robang, Jens O. Watzlawik +4 more

Power Law in a Bounded Range: Estimating the Lower and Upper Bounds from Sample Data

arXiv (Cornell University)(2023)10.48550/arxiv.2303.13456

N/A

0DataRank · unranked

0 citations

Huan‐Xiang Zhou

Fundamental Aspects of Phase-Separated Biomolecular Condensates

Chemical Reviews(2024)10.1021/acs.chemrev.4c00138

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0DataRank · unranked

82 citations

Divya Kota, Sanbo Qin, Ramesh Prasad, Huan‐Xiang Zhou

Adenosine Triphosphate Mediates Phase Separation of Disordered Basic Proteins by Bridging Intermolecular Interaction Networks

Journal of the American Chemical Society(2024)10.1021/jacs.3c09134

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0DataRank · unranked

64 citations

Ramesh Prasad, Huan‐Xiang Zhou, Divya Kota

Surface Charge Can Modulate Phase Separation of Multidomain Proteins

Journal of the American Chemical Society(2024)10.1021/jacs.3c12789

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0DataRank · unranked

40 citations

Sanbo Qin, Huan‐Xiang Zhou, Michael K. Rosen, Jonggul Kim

Amino acid-dependent phase equilibrium and material properties of tetrapeptide condensates

Cell Reports Physical Science(2024)10.1016/j.xcrp.2024.102218

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0DataRank · unranked

17 citations

Ramesh Prasad, Siyuan Su, Daesung Lee, Huan‐Xiang Zhou, Yi Zhang

Protamine-Mediated Tangles Produce Extreme Deoxyribonucleic Acid Compaction

Journal of the American Chemical Society(2024)10.1021/jacs.4c12468

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0DataRank · unranked

10 citations

Anshika Dhiman, Hashini Ekanayake Mudiyanselage, Huan‐Xiang Zhou, Vikhyaat Ahlawat

Calculating structure factors of protein solutions by atomistic modeling of protein-protein interactions

Physica A Statistical Mechanics and its Applications(2024)10.1016/j.physa.2024.129844

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0DataRank · unranked

2 citations

Huan‐Xiang Zhou, Sanbo Qin

Predicting the sequence-dependent backbone dynamics of intrinsically disordered proteins

eLife(2024)10.7554/elife.88958.3

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0DataRank · unranked

1 citations

Huan‐Xiang Zhou, Sanbo Qin

Interaction between Aβ and tau on reversion and conversion in mild cognitive impairment patients: After 2-year follow-up

Heliyon(2024)10.1016/j.heliyon.2024.e26839

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0DataRank · unranked

1 citations

Qiuping Chen, Zhenfa Fu, Yuqun Liang, Guohua Xu, Huan‐Xiang Zhou +2 more

Direct and indirect salt effects on homotypic phase separation

eLife(2024)10.7554/elife.100282

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0DataRank · unranked

10 citations

Souvik Dey, Huan‐Xiang Zhou, Matt MacAinsh

Fundamental Aspects of Phase-Separated Biomolecular Condensates

ChemRxiv(2024)10.26434/chemrxiv-2024-m94x2

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0DataRank · unranked

2 citations

Divya Kota, Sanbo Qin, Ramesh Prasad, Huan‐Xiang Zhou

Membrane-assisted Aβ40 aggregation pathways

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.05.611426

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0DataRank · unranked

1 citations

Huan‐Xiang Zhou, Fidha Nazreen Kunnath Muhammedkutty

Tardigrade Dsup: Interactions with DNA and protection of cells from oxidative stress

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.06.622393

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0DataRank · unranked

1 citations

Hetian Su, Yanxuan Zhu, Anshika Dhiman, Huan‐Xiang Zhou, Wei Lin +2 more

Calculating Structure Factors of Protein Solutions by Atomistic Modeling of Protein-Protein Interactions

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.27.587040

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0DataRank · unranked

0 citations

Huan‐Xiang Zhou, Sanbo Qin

Author response: Predicting the sequence-dependent backbone dynamics of intrinsically disordered proteins

(2024)10.7554/elife.88958.3.sa3

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0 citations

Huan‐Xiang Zhou, Sanbo Qin

Atomistic molecular dynamics simulations of intrinsically disordered proteins

Current Opinion in Structural Biology(2025)10.1016/j.sbi.2025.103029

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0DataRank · unranked

29 citations

Matthew MacAinsh, Huan‐Xiang Zhou, Fidha Nazreen Kunnath Muhammedkutty

Membrane-assisted Aβ40 aggregation pathways

Cell Reports Physical Science(2025)10.1016/j.xcrp.2025.102436

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0DataRank · unranked

5 citations

Huan‐Xiang Zhou, Fidha Nazreen Kunnath Muhammedkutty

Mycobacterium tuberculosis CrgA Forms a Dimeric Structure with Its Transmembrane Domain Sandwiched between Cytoplasmic and Periplasmic β-Sheets, Enabling Multiple Interactions with Other Divisome Proteins

Journal of the American Chemical Society(2025)10.1021/jacs.4c17168

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0DataRank · unranked

4 citations

Ramesh Prasad, Nabanita Das, Joshua Taylor, Huajun Qin, Wenhao Hu +6 more

Correlated Segments of Intrinsically Disordered Proteins as Drivers of Homotypic Phase Separation

JACS Au(2025)10.1021/jacsau.5c00733

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0DataRank · unranked

1 citations

Huan‐Xiang Zhou

Fast calculation of small-angle scattering profiles of dense protein solutions modeled at the all-atom level

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2519265122

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0DataRank · unranked

1 citations

Huan‐Xiang Zhou, Sanbo Qin

DIRseq as a method for predicting drug-interacting residues of intrinsically disordered proteins from sequences

eLife(2025)10.7554/elife.107470

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0DataRank · unranked

3 citations

Sanbo Qin, Huan‐Xiang Zhou, Matthew MacAinsh

Conformations and sequence determinants in the lipid binding of an adhesive peptide derived from Vibrio cholerae biofilm

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.14.664771

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0DataRank · unranked

1 citations

Ramesh Prasad, Sarvagya Saluja, Yi‐Yan Yang, Qi Yan, Sydney O. Shuster +7 more

Correlated Segments of Intrinsically Disordered Proteins as Drivers of Homotypic Phase Separation

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.06.647444

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0DataRank · unranked

0 citations

Huan‐Xiang Zhou

Determinants for Fusion Speed of Biomolecular Droplets

Angewandte Chemie International Edition(2020)10.1002/anie.202006711

N/A

0DataRank · unranked

71 citations

Huan‐Xiang Zhou, Archishman Ghosh

DIRseq: a method for predicting drug-interacting residues of intrinsically disordered proteins from sequences

eLife(2025)10.7554/elife.107470.1

N/A

0DataRank · unranked

0 citations

Sanbo Qin, Huan‐Xiang Zhou, Matthew MacAinsh

Membrane Association and Functional Mechanism of Synaptotagmin-1 in Triggering Vesicle Fusion

Biophysical Journal(2020)10.1016/j.bpj.2020.08.008

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0DataRank · unranked

15 citations

Huan‐Xiang Zhou, Ramesh Prasad