🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Xu Shi

AbbVie (United States)

ORCID: 0000-0001-9130-9289
Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.4Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models

Cell(2023)10.1016/j.cell.2023.02.018
Top 15%
1.4DataRank
Top 15%82 citations

Jiahao Gao, Beatrice Borsari, Yucheng T. Yang, Timur R. Galeev, Gamze Gürsoy +95 more

Papers

Driven by 8 papers — median percentile 85. Top paper: “The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models”.

The EN-TEx resource of multi-tissue personal epigenomes & variant-impact models

Cell(2023)10.1016/j.cell.2023.02.018
Top 15%
1.4DataRank
Top 15%82 citations

Jiahao Gao, Beatrice Borsari, Yucheng T. Yang, Timur R. Galeev, Gamze Gürsoy +95 more

IntAPT: integrated assembly of phenotype-specific transcripts from multiple RNA-seq profiles

Bioinformatics(2020)10.1093/bioinformatics/btaa852
N/A
0DataRank · unranked
1 citations

Andrew F. Neuwald, Xiao Wang, Tian‐Li Wang, Leena Hilakivi‐Clarke, Robert Clarke +2 more

ChIP-BIT2: a software tool to detect weak binding events using a Bayesian integration approach

BMC Bioinformatics(2021)10.1186/s12859-021-04108-5
N/A
0DataRank · unranked
1 citations

Xu Shi, Andrew F. Neuwald, Leena Hilakivi‐Clarke, Robert Clarke, Jianhua Xuan +1 more

A Bayesian approach for accurate de novo transcriptome assembly

Scientific Reports(2021)10.1038/s41598-021-97015-x
N/A
0DataRank · unranked
2 citations

Xiao Wang, Andrew F. Neuwald, Leena Halakivi-Clarke, Robert Clarke, Jianhua Xuan +1 more

Human iPSC-hepatocyte modeling of alpha-1 antitrypsin heterozygosity reveals metabolic dysregulation and cellular heterogeneity

Cell Reports(2022)10.1016/j.celrep.2022.111775
N/A
0DataRank · unranked
19 citations

Rhiannon B. Werder, Feiya Wang, Taylor Matte, Michelle Higgins, Mark Dodge +14 more

Modeling of Alpha-1 Antitrypsin Deficiency with Syngeneic Human iPSC-Hepatocytes Reveals Metabolic Dysregulation and Cellular Heterogeneity in PiMZ and PiZZ Hepatocytes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.01.478663
N/A
0DataRank · unranked
1 citations

Rhiannon B. Werder, Feiya Wang, Taylor Matte, Michelle Higgins, Mark Dodge +13 more

Inactivation of Arid1a in the endometrium is associated with endometrioid tumorigenesis through transcriptional reprogramming

Nature Communications(2020)10.1038/s41467-020-16416-0
N/A
0DataRank · unranked
91 citations

Wenjing Shen, Xu Shi, Xi Chen, Yu Yu, Zheng-Cheng Yu +13 more

Bayesian identification of differentially expressed isoforms using a novel joint model of RNA-seq data

PLoS Computational Biology(2025)10.1371/journal.pcbi.1012750
N/A
0DataRank · unranked
1 citations

Xiao Wang, Lü Jin, Leena Halakivi-Clarke, Robert Clarke, Andrew F. Neuwald +2 more