Nitin S. Baliga

Also affiliated with University of Washington, Institute for Systems Biology, InSysBio (Russia)

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.0Author DataRank

Indexed papers

6in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A single-cell based precision medicine approach using glioblastoma patient-specific models

npj Precision Oncology(2022)10.1038/s41698-022-00294-4

Top 23%

0.883DataRank

Top 23%55 citations

Abdullah H. Feroze, Samuel Emerson, Anca B. Mihalas, C. Dirk Keene, Patrick J. Cimino +7 more

Papers

Driven by 41 papers — median percentile 46. Top paper: “A single-cell based precision medicine approach using glioblastoma patient-specific models”.

A single-cell based precision medicine approach using glioblastoma patient-specific models

npj Precision Oncology(2022)10.1038/s41698-022-00294-4

Top 23%

0.883DataRank

Top 23%55 citations

Abdullah H. Feroze, Samuel Emerson, Anca B. Mihalas, C. Dirk Keene, Patrick J. Cimino +7 more

A Genome-Scale Atlas Reveals Complex Interplay of Transcription and Translation in an Archaeon

mSystems(2023)10.1128/msystems.00816-22

Top 42%

0.450DataRank

Top 42%11 citations

Ulrike Kusebauch, Lívia S. Zaramela, Wei‐Ju Wu, João Paulo P. de Almeida, Serdar Turkarslan +7 more

A comprehensive spectral assay library to quantify the Halobacterium salinarum NRC-1 proteome by DIA/SWATH-MS

Scientific Data(2023)10.1038/s41597-023-02590-5

Top 52%

0.337DataRank

Top 52%6 citations

Alan P. R. Lorenzetti, David Campbell, Min Pan, David Shteynberg, Charu Kapil +5 more

A single-cell based precision medicine approach using glioblastoma patient-specific models

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.13.426485

Top 56%

0.287DataRank

Top 56%4 citations

Abdullah Feroze, Samuel Emerson, Anca B. Mihalas, C. Dirk Keene, Patrick J. Cimino +7 more

In vivo commensal control of Clostridioides difficile virulence

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.04.894915

N/A

0DataRank · unranked

9 citations

Nicholas DiBenedetto, Jay Worley, Johann Peltier, Mario L. Arrieta-Ortiz, Rupa Immanuel +14 more

Disrupting the ArcA regulatory network increases tetracycline susceptibility of Tet R Escherichia coli

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.31.275693

N/A

0DataRank · unranked

2 citations

Min Pan, Amardeep Kaur, Vivek Srinivas, Ananya Dash, Rupa Immanuel +2 more

A plastid antiporter as a bioindicator of Thalassiosira pseudonana resilience

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.09.418384

N/A

0DataRank · unranked

1 citations

J. R. Ashworth, Allison Cusick, Raffaela M. Abbriano, E. Virginia Armbrust, Mark Hildebrand +3 more

A system-level gene regulatory network model for Plasmodium falciparum

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.10.235317

Top 100%

0DataRank

Top 100%0 citations

Ling Wei, Eliza J. R. Peterson, ML Arrieta-Ortiz, Samuel A. Danziger, Nitin S. Baliga +3 more

Predictive regulatory and metabolic network models for systems analysis of Clostridioides difficile

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.14.297382

Top 100%

0DataRank

Top 100%0 citations

Rupa Immanuel, Serdar Turkarslan, Wei Wu, Brintha P. Girinathan, Jay Worley +7 more

In vivo commensal control of Clostridioides difficile virulence

Cell Host & Microbe(2021)10.1016/j.chom.2021.09.007

N/A

0DataRank · unranked

121 citations

Nicholas DiBenedetto, Jay Worley, Johann Peltier, Mario L. Arrieta‐Ortiz, Rupa Immanuel +14 more

Mycobacterium abscessus biofilms produce an extracellular matrix and have a distinct mycolic acid profile

The Cell Surface(2021)10.1016/j.tcsw.2021.100051

N/A

0DataRank · unranked

58 citations

Eliza J. R. Peterson, Mario L. Arrieta‐Ortiz, Min Pan, Alessandro Di Maio, Nitin S. Baliga +2 more

A Systems Approach to Brain Tumor Treatment

Cancers(2021)10.3390/cancers13133152

N/A

0DataRank · unranked

46 citations

Adrián López García de Lomana, Diego M. Marzese, Tiffany Juarez, Abdullah H. Feroze, Parvinder Hothi +6 more

Predictive regulatory and metabolic network models for systems analysis of Clostridioides difficile

Cell Host & Microbe(2021)10.1016/j.chom.2021.09.008

N/A

0DataRank · unranked

27 citations

Rupa Immanuel, Serdar Turkarslan, Wei‐Ju Wu, Brintha P. Girinathan, Jay Worley +7 more

Genetic program activity delineates risk, relapse, and therapy responsiveness in multiple myeloma

npj Precision Oncology(2021)10.1038/s41698-021-00185-0

N/A

0DataRank · unranked

9 citations

Serdar Turkarslan, Wei‐Ju Wu, Samuel A. Danziger, David J. Reiss, Mike J. Mason +8 more

Transcriptome signature of cell viability predicts drug response and drug interaction in Mycobacterium tuberculosis

Cell Reports Methods(2021)10.1016/j.crmeth.2021.100123

N/A

0DataRank · unranked

9 citations

Rene A. Ruiz, Min Pan, Rupa Immanuel, Eliza J. R. Peterson, Nitin S. Baliga +1 more

Quantitative prediction of conditional vulnerabilities in regulatory and metabolic networks using PRIME

npj Systems Biology and Applications(2021)10.1038/s41540-021-00205-6

N/A

0DataRank · unranked

9 citations

Mario L. Arrieta‐Ortiz, Rene A. Ruiz, Min Pan, Adrián López García de Lomana, Eliza J. R. Peterson +2 more

A systems-level gene regulatory network model for Plasmodium falciparum

Nucleic Acids Research(2021)10.1093/nar/gkaa1245

N/A

0DataRank · unranked

3 citations

Ling Wei, Eliza J. R. Peterson, Mario L. Arrieta‐Ortiz, Samuel A. Danziger, Nitin S. Baliga +3 more

Autophagy as a Mechanism for Adaptive Prediction-Mediated Emergence of Drug Resistance

Frontiers in Microbiology(2021)10.3389/fmicb.2021.712631

N/A

0DataRank · unranked

2 citations

John D. Aitchison, Nitin S. Baliga, Nivedita Nivedita

Quantitative prediction of conditional vulnerabilities in regulatory and metabolic networks of Mycobacterium tuberculosis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.29.428876

N/A

0DataRank · unranked

4 citations

Mario L. Arrieta‐Ortiz, Rene A. Ruiz, Min Pan, Adrián López García de Lomana, Eliza J. R. Peterson +2 more

MtrA regulation of essential peptidoglycan cleavage in Mycobacterium tuberculosis during infection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.25.432019

N/A

0DataRank · unranked

4 citations

Aaron N. Brooks, David J. Reiss, Amardeep Kaur, Wei‐Ju Wu, Robert Morrison +9 more

Autophagy as a mechanism for adaptive prediction-mediated emergence of drug resistance

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.02.429461

N/A

0DataRank · unranked

0 citations

John D. Aitchison, Nitin S. Baliga, Nivedita Nivedita

Mycobacterium abscessus biofilms produce an ECM and have a distinct mycolic acid profile

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.05.434154

N/A

0DataRank · unranked

0 citations

Eliza J. R. Peterson, Mario L. Arrieta‐Ortiz, Min Pan, Alessandro Di Maio, Nitin S. Baliga +2 more

Reconsidering the in vivo functions of Clostridial Stickland amino acid fermentations

Anaerobe(2022)10.1016/j.anaerobe.2022.102600

N/A

0DataRank · unranked

53 citations

Madeline Graham, Mario L. Arrieta‐Ortiz, Rupa Immanuel, Nitin S. Baliga, Lynn Bry +1 more

Mathematical models to study the biology of pathogens and the infectious diseases they cause

iScience(2022)10.1016/j.isci.2022.104079

N/A

0DataRank · unranked

22 citations

Jonathan M. Monk, Saugat Poudel, Charles J. Norsigian, Anand V. Sastry, Chen Liao +15 more

Disrupting the ArcA Regulatory Network Amplifies the Fitness Cost of Tetracycline Resistance in Escherichia coli

mSystems(2022)10.1128/msystems.00904-22

N/A

0DataRank · unranked

14 citations

Min Pan, Amardeep Kaur, Evan Pepper-Tunick, Vivek Srinivas, Ananya Dash +5 more

MadR mediates acyl CoA-dependent regulation of mycolic acid desaturation in mycobacteria

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2111059119

N/A

0DataRank · unranked

8 citations

Eliza J. R. Peterson, Rebeca Bailo, Min Pan, Albel Singh, Patrick J. Moynihan +5 more

A genome-scale atlas reveals complex interplay of transcription and translation in an archaeon

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.31.505529

N/A

0DataRank · unranked

4 citations

Ulrike Kusebauch, Lívia S. Zaramela, Wei‐Ju Wu, João Paulo P. de Almeida, Serdar Turkarslan +7 more

Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle

Cell(2023)10.1016/j.cell.2023.08.017

N/A

0DataRank · unranked

109 citations

Larry A. Gallagher, Pia A. Andrade, Andi Liu, Ian R. Humphreys, Serdar Turkarslan +11 more

MtrA modulates Mycobacterium tuberculosis cell division in host microenvironments to mediate intrinsic resistance and drug tolerance

Cell Reports(2023)10.1016/j.celrep.2023.112875

N/A

0DataRank · unranked

33 citations

Aaron N. Brooks, David J. Reiss, Amardeep Kaur, Julie Do, Min Pan +9 more

Growth phase estimation for abundant bacterial populations sampled longitudinally from human stool metagenomes

Nature Communications(2023)10.1038/s41467-023-41424-1

N/A

0DataRank · unranked

24 citations

Christian Diener, James G. Wilson, Jacob J. Valenzuela, Nitin S. Baliga, Sean M. Gibbons +1 more

Discovery of a glutathione utilization pathway in Francisella that shows functional divergence between environmental and pathogenic species

Cell Host & Microbe(2023)10.1016/j.chom.2023.06.010

N/A

0DataRank · unranked

11 citations

Hannah E. Ledvina, Catherine A. Tower, Stanimir Kambarev, Elizabeth Liu, James C. Charity +18 more

Personalized Clostridioides difficile engraftment risk prediction and probiotic therapy assessment in the human gut

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.28.538771

N/A

0DataRank · unranked

10 citations

Nitin S. Baliga, Christian Diener, Sean M. Gibbons, Alex V. Carr

Genetic manipulation of candidate phyla radiation bacteria provides functional insights into microbial dark matter

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.02.539146

N/A

0DataRank · unranked

1 citations

Larry A. Gallagher, Pia A. Andrade, Andi Liu, Ian R. Humphreys, Serdar Turkarslan +11 more

Discovery of a unique pathway for glutathione utilization in Francisella

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.02.526638

N/A

0DataRank · unranked

0 citations

Hannah E. Ledvina, Catherine A. Tower, Stanimir Kambarev, Elizabeth Liu, James C. Charity +17 more

Gene regulatory network topology governs resistance and treatment escape in glioma stem-like cells

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.02.578510

N/A

0DataRank · unranked

1 citations

Parvinder Hothi, Adrián López García de Lomana, Min Pan, R. Brent Calder, Serdar Turkarslan +7 more

Personalized Clostridioides difficile colonization risk prediction and probiotic therapy assessment in the human gut

Cell Systems(2025)10.1016/j.cels.2025.101367

N/A

0DataRank · unranked

9 citations

Nitin S. Baliga, Christian Diener, Sean M. Gibbons, Alex V. Carr

Inference of Bacterial Small RNA Regulatory Networks and Integration with Transcription Factor-Driven Regulatory Networks

mSystems(2020)10.1128/msystems.00057-20

N/A

0DataRank · unranked

20 citations

Christoph Hafemeister, Bentley Shuster, Nitin S. Baliga, Richard Bonneau, Patrick Eichenberger +1 more

Individualized dynamic risk assessment and treatment selection for multiple myeloma

British Journal of Cancer(2025)10.1038/s41416-025-02987-6

N/A

0DataRank · unranked

2 citations

Serdar Turkarslan, Anoop P. Patel, David G. Coffey, Pamela S. Becker, Nitin S. Baliga +1 more

Antibody-recruiting protein-catalyzed capture agents to combat antibiotic-resistant bacteria

Chemical Science(2020)10.1039/c9sc04842a

N/A

0DataRank · unranked

18 citations

Ajay Suresh Akhade, Mario L. Arrieta‐Ortiz, Bert Lai, Vivek Srinivas, James P. Hopkins +5 more

Selective Translation of Low Abundance and Upregulated Transcripts in Halobacterium salinarum

mSystems(2020)10.1128/msystems.00329-20

N/A

0DataRank · unranked

13 citations

Ulrike Kusebauch, Arjun V. Raman, Min Pan, Serdar Turkarslan, Alan P. R. Lorenzetti +3 more

Crippling life support for SARS-CoV-2 and other viruses through synthetic lethality

The Journal of Cell Biology(2020)10.1083/jcb.202006159

N/A

0DataRank · unranked

28 citations

Arti T. Navare, Almer M. van der Sloot, Jasmin Coulombe‐Huntington, Michael P. Rout, Nitin S. Baliga +8 more

Nitin S. Baliga

Indexed papers

Top data-sharing exemplar

Papers