Mark Ebbert

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.0Author DataRank

Indexed papers

7in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Polygenic Risk Score Knowledge Base offers a centralized online repository for calculating and contextualizing polygenic risk scores

Communications Biology(2022)10.1038/s42003-022-03795-x

Top 22%

0.924DataRank

Top 22%16 citations

Elizabeth Vance, Matthew Cloward, Ed Ringger, Louisa Dayton, Mark Ebbert +94 more

Papers

Driven by 21 papers — median percentile 54. Top paper: “The Polygenic Risk Score Knowledge Base offers a centralized online repository for calculating and contextualizing polygenic risk scores”.

The Polygenic Risk Score Knowledge Base offers a centralized online repository for calculating and contextualizing polygenic risk scores

Communications Biology(2022)10.1038/s42003-022-03795-x

Top 22%

0.924DataRank

Top 22%16 citations

Elizabeth Vance, Matthew Cloward, Ed Ringger, Louisa Dayton, Mark Ebbert +94 more

Pairwise Correlation Analysis of the Alzheimer’s Disease Neuroimaging Initiative (ADNI) Dataset Reveals Significant Feature Correlation

Genes(2021)10.3390/genes12111661

Top 27%

0.751DataRank

Top 27%13 citations

Matthew Hodgman, Brianna B. Greenwood, Devorah O. Stucki, Katrisa M. Ward, Mark Ebbert +4 more

Mapping medically relevant RNA isoform diversity in the aged human frontal cortex with deep long-read RNA-seq

Nature Biotechnology(2024)10.1038/s41587-024-02245-9

N/A

0.604DataRank · unranked

55 citations

J. Anthony Brandon, Madeline L. Page, Kayla A. Nations, Ketsile I. Dikobe, Brendan J. White +18 more

Using deep long-read RNAseq in Alzheimer’s disease brain to assess medical relevance of RNA isoform diversity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.06.552162

N/A

0.557DataRank · unranked

14 citations

J. Anthony Brandon, Madeline L. Page, Kayla A. Nations, Ketsile I. Dikobe, Brendan J. White +18 more

Systematic review and meta‐analysis of bulk RNAseq studies in human Alzheimer's disease brain tissue

Alzheimer s & Dementia(2025)10.1002/alz.70025

Top 36%

0.532DataRank

Top 36%18 citations

Kristin L. Fox, Lucas Lobraico Libermann, Sophia Ronchetti Martins Xavier, Guilherme Tarnowski Dallarosa, Rhaná Carolina Santos +4 more

Long-read targeted sequencing uncovers clinicopathological associations forC9orf72-linked diseases

Brain(2021)10.1093/brain/awab006

N/A

0.524DataRank · unranked

32 citations

Ross A. Aleff, Jazmyne L. Jackson, NiCole A. Finch, Matthew Baker, Tania F. Gendron +17 more

Surveying the landscape of RNA isoform diversity and expression across 9 GTEx tissues using long-read sequencing data

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.13.579945

Top 46%

0.396DataRank

Top 46%10 citations

Bernardo Aguzzoli Heberle, J. Anthony Brandon, Mark E. Wadsworth, Lacey A. Gordon, Kayla A. Nations +2 more

Ramp Sequence May Explain Synonymous Variant Association with Alzheimer’s Disease in the Paired Immunoglobulin-like Type 2 Receptor Alpha (PILRA)

Biomedicines(2025)10.3390/biomedicines13030739

N/A

0.208DataRank · unranked

3 citations

J. Anthony Brandon, Lauren Harmon, Hady W. Sabra, Chloe C. Lucido, Josue D. Gonzalez Murcia +6 more

Systematic review and meta-analysis of bulk RNAseq studies in human Alzheimer’s disease brain tissue

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.07.622520

Top 67%

0.176DataRank

Top 67%2 citations

Kristin L. Fox, Lucas Lobraico Libermann, Sophia Ronchetti Martins Xavier, Guilherme Tarnowski Dallarosa, Rhaná Carolina Santos +4 more

RNApysoforms: fast rendering interactive visualization of RNA isoform structure and expression in Python

Bioinformatics Advances(2024)10.1093/bioadv/vbaf057

N/A

0.165DataRank · unranked

2 citations

Madeline L. Page, Emil K. Gustavsson, Mina Ryten, Mark Ebbert, Bernardo Aguzzoli Heberle

Transcriptional response to VZV infection is modulated by RNA polymerase III in lung epithelial cell lines

Frontiers in Cellular and Infection Microbiology(2022)10.3389/fcimb.2022.943587

N/A

0.165DataRank · unranked

2 citations

Elizabeth Vance, Delphine C. Malherbe, Mark Ebbert, Ilhem Messaoudi, Brianna M. Doratt

A bioinformatic survey of RNA isoform diversity and expression across 9 GTEx tissues using long-read sequencing data

BMC Genomics(2025)10.1186/s12864-025-11919-w

Top 70%

0.165DataRank

Top 70%2 citations

Bernardo Aguzzoli Heberle, J. Anthony Brandon, Mark E. Wadsworth, Lacey A. Gordon, Kayla A. Nations +3 more

Genome annotations matter: characterizing Ensembl hg38 annotations from 2014 to 2023

BMC Genomics(2025)10.1186/s12864-025-12167-8

Top 78%

0.104DataRank

Top 78%1 citations

Mark E. Wadsworth, Bernardo Aguzzoli Heberle, David W. Fardo, Mark Ebbert, Madeline L. Page

Genome-wide association study of multiple neuropathology endophenotypes identifies novel risk loci and provides insights into known Alzheimer’s risk loci

medRxiv(2022)10.1101/2022.12.13.22282475

N/A

0.104DataRank · unranked

1 citations

Yuriko Katsumata, Steven A. Claas, Mark Ebbert, Erin L. Abner, Timothy J. Hohman +9 more

The Ramp Atlas: facilitating tissue and cell-specific ramp sequence analyses through an intuitive web interface

NAR Genomics and Bioinformatics(2022)10.1093/nargab/lqac039

N/A

0DataRank · unranked

6 citations

Taylor E Meurs, Matthew Hodgman, Benjamin P. Song, Kyle N. Miller, Mark Ebbert +3 more

Culture shock: microglial heterogeneity, activation, and disrupted single-cell microglial networks in vitro

Molecular Neurodegeneration(2022)10.1186/s13024-022-00531-1

N/A

0DataRank · unranked

75 citations

Tanner Jensen, Jonathon Sens, Kuixi Zhu, Won‐Min Song, Bin Zhang +4 more

Web-Based Protein Interactions Calculator Identifies Likely Proteome Coevolution with Alzheimer’s Disease-Associated Proteins

Genes(2022)10.3390/genes13081346

N/A

0DataRank · unranked

1 citations

Brandon D. Pickett, Mark Ebbert, John S. K. Kauwe, Justin Miller, Katrisa M. Ward

Ramp sequence may explain synonymous variant association with Alzheimer’s disease in the Paired Immunoglobulin-like Type 2 Receptor Alpha ( PILRA )

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.06.631528

N/A

0DataRank · unranked

1 citations

J. Anthony Brandon, Lauren M. McKinnon, Hady W. Sabra, Chloe C. Lucido, Josue D. Gonzalez Murcia +6 more

Sequencing the gaps: dark genomic regions persist in CHM13 despite long-read advances

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.23.655776

N/A

0DataRank · unranked

1 citations

Madeline L. Page, Bernardo Aguzzoli Heberle, Justin Miller, Cody J. Steely, Mark Ebbert +1 more

Systematic contextual biases in SegmentNT potentially relevant to other nucleotide transformer models

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.09.647946

N/A

0DataRank · unranked

0 citations

Alyssa Ho, Madeline L. Page, Bram Dutch, Blake K. Byer, Kristen L. Hankins +12 more

RNApysoforms: Fast rendering interactive visualization of RNA isoform structure and expression in Python

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.06.622357

N/A

0DataRank · unranked

1 citations

Madeline L. Page, Emil K. Gustavsson, Mina Ryten, Mark Ebbert, Bernardo Aguzzoli Heberle

Mark Ebbert

Indexed papers

Top data-sharing exemplar

Papers