Bingqing Xie

Also affiliated with The University of Texas Southwestern Medical Center

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.2Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A Roadmap for the Human Gut Cell Atlas

Nature Reviews Gastroenterology & Hepatology(2023)10.1038/s41575-023-00784-1

Top 17%

1.2DataRank

Top 17%51 citations

Kylie R. James, Mandeep Kaur, Sebastian Pott, Zhixin Li, Albert Burger +37 more

Papers

Driven by 17 papers — median percentile 83. Top paper: “A Roadmap for the Human Gut Cell Atlas”.

A Roadmap for the Human Gut Cell Atlas

Nature Reviews Gastroenterology & Hepatology(2023)10.1038/s41575-023-00784-1

Top 17%

1.2DataRank

Top 17%51 citations

Kylie R. James, Mandeep Kaur, Sebastian Pott, Zhixin Li, Albert Burger +37 more

Engineered exosomes targeting MYC reverse the proneural-mesenchymal transition and extend survival of glioblastoma

Extracellular Vesicle(2022)10.1016/j.vesic.2022.100014

N/A

0.542DataRank · unranked

36 citations

Wafa E. Hassen, Janine Hensel, Jiha Kim, Hikaru Sugimoto, Bingrui Li +12 more

Imbalanced gut microbiota predicts and drives the progression of nonalcoholic fatty liver disease and nonalcoholic steatohepatitis in a fast-food diet mouse model

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.09.523249

N/A

0.521DataRank · unranked

11 citations

Sawako Miyoshi, Jake B. Hermanson, Jun Miyoshi, Bingqing Xie, Orlando DeLeon +10 more

Plasma metabolites with mechanistic and clinical links to the neurovascular disease cavernous angioma

Communications Medicine(2023)10.1038/s43856-023-00265-1

N/A

0.406DataRank · unranked

14 citations

Bingqing Xie, Ying Li, Je Yeong Sone, Sharbel Romanos, Chang Chen +27 more

Microbiome function and neurodevelopment in Black infants: vitamin B 12 emerges as a key factor

Gut Microbes(2024)10.1080/19490976.2023.2298697

N/A

0.385DataRank · unranked

12 citations

Wilfredo Cruz Ayala, Rimma Ilyumzhinova, Kimberley Mbayiwa, Anna Sroka, Bingqing Xie +4 more

mDrop-seq: Massively parallel single-cell RNA-seq of Saccharomyces cerevisiae and Candida albicans

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.06.451338

N/A

0.269DataRank · unranked

5 citations

Bingqing Xie, Rebecca Back, Alan Selewa, Heather Eckart, Reeta P. Rao +2 more

Circulating Plasma miRNA Homologs in Mice and Humans Reflect Familial Cerebral Cavernous Malformation Disease

Translational Stroke Research(2022)10.1007/s12975-022-01050-3

N/A

0.241DataRank · unranked

4 citations

Abhinav Srinath, Ying Li, Bingqing Xie, Ge Chen, Yan Li +25 more

Prompts to Table: Specification and Iterative Refinement for Clinical Information Extraction with Large Language Models

medRxiv(2025)10.1101/2025.02.11.25322107

N/A

0.208DataRank · unranked

3 citations

Alana Christie, Michael J. Holcomb, Bingqing Xie, Anubhav Jain, Joseph Vento +8 more

Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation

Scientific Reports(2020)10.1038/s41598-020-58327-6

N/A

0DataRank · unranked

110 citations

Ryan Dohn, Heather Eckart, Stephanie Lozano, Bingqing Xie, Eric Gauchat +7 more

Multiomic analysis reveals cellular, transcriptomic and epigenetic changes in intestinal pouches of ulcerative colitis patients

medRxiv(2023)10.1101/2023.11.11.23298309

N/A

0DataRank · unranked

5 citations

Ran Zhou, Bingqing Xie, Cambrian Y. Liu, Martin Kalski, Candace M. Cham +14 more

The Host-specific Microbiota is Required for Diet-Specific Metabolic Homeostasis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.05.565654

N/A

0DataRank · unranked

1 citations

Bingqing Xie, Tyler J. Long, Marissa StGeorge, Alan Tan, Sumeed Manzoor +6 more

Iterative refinement and goal articulation to optimize large language models for clinical information extraction

npj Digital Medicine(2025)10.1038/s41746-025-01686-z

N/A

0DataRank · unranked

15 citations

Alana Christie, Michael J. Holcomb, Bingqing Xie, Apurva Jain, Joseph Vento +8 more

Fecal Microbial Profiles and Short-Chain Fatty Acid/Bile Acid Metabolomics in Patients With Age-Related Macular Degeneration: A Pilot Study

Investigative Ophthalmology & Visual Science(2025)10.1167/iovs.66.4.21

N/A

0DataRank · unranked

11 citations

Jason Xiao, Amir Mani, Quadis Evans, Christopher Phung, Hugo Barba +14 more

Radiologic, Pathologic, and Deep Learning Predictors of Response to Immune Checkpoint Blockade in Renal Cell Carcinoma Patients Undergoing Post-Treatment Nephrectomy

medRxiv(2025)10.1101/2025.11.19.25340277

N/A

0DataRank · unranked

0 citations

Alana Christie, Vipul Jarmale, Farzad Tahmasebi, Bingqing Xie, Jeffrey Miyata +9 more

Bacteroidota and Lachnospiraceae Integration Into the Gut Microbiome at Key Time Points in Early Life are Critical for Neurodevelopment

Research Square(2021)10.21203/rs.3.rs-668952/v1

N/A

0DataRank · unranked

1 citations

Mehneez Ali, Mark D’Souza, Patrick D. Hughes, Dinanath Sulakhe, Annie Z. Wang +6 more

mDrop-Seq: Massively Parallel Single-Cell RNA-Seq of Saccharomyces cerevisiae and Candida albicans

Vaccines(2021)10.3390/vaccines10010030

N/A

0DataRank · unranked

23 citations

Bingqing Xie, Rebecca Back, Alan Selewa, Heather Eckart, Reeta P. Rao +2 more

Bacteroidota and Lachnospiraceae integration into the gut microbiome at key time points in early life are linked to infant neurodevelopment

Gut Microbes(2021)10.1080/19490976.2021.1997560

N/A

0DataRank · unranked

85 citations

Mehneez Ali, Mark D’Souza, Patrick D. Hughes, Dinanath Sulakhe, Annie Z. Wang +6 more

Bingqing Xie

Indexed papers

Top data-sharing exemplar

Papers