Martin Gruebele

Biochemistry, Genetics and Molecular BiologyMaterials SciencePhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 17 papers. Top paper: “An in vitro mimic of in‐cell solvation for protein folding studies”.

An in vitro mimic of in‐cell solvation for protein folding studies

Protein Science(2020)10.1002/pro.3833

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35 citations

Jonathan Deutsch, Martin Gruebele, Caitlin M. Davis

An in-silico human cell model reveals the influence of spatial organization on RNA splicing

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007717

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23 citations

J.R. Peterson, Martin Gruebele, Zaida Luthey‐Schulten, Zhaleh Ghaemi

Molecular mechanism of capsid disassembly in hepatitis B virus

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2102530118

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30 citations

Martin Gruebele, Emad Tajkhorshid, Zhaleh Ghaemi

Molecular Mechanism of Capsid Disassembly in Hepatitis B Virus

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.08.430262

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2 citations

Martin Gruebele, Emad Tajkhorshid, Zhaleh Ghaemi

Threading single proteins through pores to compare their energy landscapes

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2202779119

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21 citations

Arash Firouzbakht, Martin Gruebele, Meni Wanunu, Prabhat Tripathi

Impact of the Cellular Environment on Adenosine Triphosphate Conformations

The Journal of Physical Chemistry Letters(2022)10.1021/acs.jpclett.2c02375

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8 citations

Haolin Luo, Ashley De Lio, Martin Gruebele, Taras V. Pogorelov, Meredith M. Rickard

Metabolons, quinary structure, and domain motion: enzyme choreography in the cytoplasm

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.13.507800

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5 citations

Meredith M. Rickard, Taras V. Pogorelov, Martin Gruebele, Premila P. Samuel

A Spatial Whole-Cell Model for Hepatitis B Viral Infection and Drug Interactions

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.01.494377

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0 citations

Oluwadara Nafiu, Emad Tajkhorshid, Martin Gruebele, Jianming Hu, Zhaleh Ghaemi

Cytoplasmic folding, mis-folding, and early stages of aggregation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.23.513428

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0 citations

Meredith M. Rickard, Mayank Boob, Martin Gruebele, Taras V. Pogorelov, Premila P. Samuel

In silico protein dynamics in the human cytoplasm: Partial folding, misfolding, fold switching, and non‐native interactions

Protein Science(2023)10.1002/pro.4790

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10 citations

Meredith M. Rickard, Mayank Boob, Martin Gruebele, Taras V. Pogorelov, Premila P. Samuel

A Marcus-Type Inverted Region in the Translocation Kinetics of a Knotted Protein

The Journal of Physical Chemistry Letters(2023)10.1021/acs.jpclett.3c02183

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5 citations

Behzad Mehrafrooz, Aleksei Aksimentiev, Sophie Jackson, Martin Gruebele, Meni Wanunu +1 more

A computational spatial whole-Cell model for hepatitis B viral infection and drug interactions

Scientific Reports(2023)10.1038/s41598-023-45998-0

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5 citations

Oluwadara Nafiu, Emad Tajkhorshid, Martin Gruebele, Jianming Hu, Zhaleh Ghaemi

Hydrogen bonding heterogeneity correlates with protein folding transition state passage time as revealed by data sonification

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2319094121

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22 citations

Premila P. Samuel, Kurt J. Hebel, Meredith M. Rickard, Mayank Boob, Franz Danksagmüller +4 more

Metastable States in the Hinge-Bending Landscape of an Enzyme in an Atomistic Cytoplasm Simulation

The Journal of Physical Chemistry Letters(2024)10.1021/acs.jpclett.3c03134

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10 citations

Andrew K. Maytin, Meredith M. Rickard, Matthew C. Russell, Taras V. Pogorelov, Martin Gruebele +1 more

Conservation of kinetic stability, but not the unfolding mechanism, between human transthyretin and a transthyretin-related enzyme

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2315007121

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5 citations

Jeffery W. Kelly, Martin Gruebele, Marcus Jäger

Enzymes in a human cytoplasm model organize into submetabolon complexes

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2414206122

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5 citations

Meredith M. Rickard, Taras V. Pogorelov, Martin Gruebele, Premila P. Samuel

Lysine carbamoylation during urea denaturation remodels the energy landscape of human transthyretin dissociation linked to unfolding

Protein Science(2025)10.1002/pro.70009

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0 citations

D.E. Mortenson, Maziar S. Ardejani, Gabriel M. Kline, Maria T. A. Dendle, N. Yan +4 more