Guanghua Xiao

The University of Texas Southwestern Medical Center

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 6%percentile

0.222Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A Pan-Cancer Patient-Derived Xenograft Histology Image Repository with Genomic and Pathologic Annotations Enables Deep Learning Analysis

Cancer Research(2024)10.1158/0008-5472.can-23-1349

Top 62%

0.222DataRank

Top 62%3 citations

Xing Yi Woo, Soner Koc, Todd Sheridan, Steven B. Neuhauser, Shidan Wang +49 more

Papers

Driven by 58 papers — median percentile 0. Top paper: “Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis”.

Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

Nature Communications(2016)10.1038/ncomms12460

N/A

3.8DataRank · unranked

87 citations

Fan Zhu, Javier García-García, Eli Stahl, Abhishek Pratap, Gaurav Pandey +108 more

Mapping cellular interactions from spatially resolved transcriptomics data

Nature Methods(2024)10.1038/s41592-024-02408-1

N/A

0.604DataRank · unranked

55 citations

Yunguan Wang, Woo Yong Chang, Alicia Malewska, Fabiana Napolitano, Jeffrey Gahan +20 more

Interaction between the autophagy protein Beclin 1 and Na+,K+-ATPase during starvation, exercise, and ischemia

JCI Insight(2020)10.1172/jci.insight.133282

N/A

0.598DataRank · unranked

53 citations

Yang Liu, Vanessa Ginet, Mingjun Shi, Jihoon Nah, Zhongju Zou +11 more

Spatial molecular profiling: platforms, applications and analysis tools

Briefings in Bioinformatics(2020)10.1093/bib/bbaa145

N/A

0.593DataRank · unranked

51 citations

Thomas Sheffield, Xiaowei Zhan, Qiwei Li, Donghan M. Yang, Yunguan Wang +5 more

Cell Segmentation With Globally Optimized Boundaries (CSGO): A Deep Learning Pipeline for Whole-Cell Segmentation in Hematoxylin-and-Eosin–Stained Tissues

Laboratory Investigation(2024)10.1016/j.labinv.2024.102184

N/A

0.360DataRank · unranked

10 citations

Shidan Wang, Ruichen Rong, Zhuo Zhao, Fangjiang Wu, Qin Zhou +11 more

Assessing consistency across functional screening datasets in cancer cells

Bioinformatics(2021)10.1093/bioinformatics/btab423

N/A

0.336DataRank · unranked

7 citations

Hongyu Liu, John D. Minna, Ralph J. DeBerardinis, Guanghua Xiao, Yang Xie +1 more

Navigating electronic health record accuracy by examination of sex incongruent conditions

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocae236

N/A

0.330DataRank · unranked

8 citations

Ralph J. DeBerardinis, Xiaowei Zhan, Guanghua Xiao, Yang Xie, Ling Cai

Image-based quantification of histological features as a function of spatial location using the Tissue Positioning System

EBioMedicine(2023)10.1016/j.ebiom.2023.104698

N/A

0.269DataRank · unranked

5 citations

Yonglong Wei, Linfeng Li, Tao Wang, Hao Zhu, Guanghua Xiao +2 more

SBDH-Reader: a large language model-powered method for extracting social and behavioral determinants of health from clinical notes

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocaf124

N/A

0.269DataRank · unranked

5 citations

Lesi He, Awais Naeem, Pui Man Chan, Asim Mohamed, Hafsa Khalil +12 more

A Pan-Cancer Patient-Derived Xenograft Histology Image Repository with Genomic and Pathologic Annotations Enables Deep Learning Analysis

Cancer Research(2024)10.1158/0008-5472.can-23-1349

Top 62%

0.222DataRank

Top 62%3 citations

Xing Yi Woo, Soner Koc, Todd Sheridan, Steven B. Neuhauser, Shidan Wang +49 more

MetaPrism: A versatile toolkit for joint taxa/gene analysis of metagenomic sequencing data

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab046

N/A

0.165DataRank · unranked

2 citations

Shuang Jiang, Yiqing Wang, Guanghua Xiao, Yang Xie, Dajiang J. Liu +4 more

Dissecting molecular, pathological, and clinical features associated with tumor neural/neuroendocrine heterogeneity

iScience(2023)10.1016/j.isci.2023.106983

N/A

0.118DataRank · unranked

1 citations

Ralph J. DeBerardinis, Guanghua Xiao, John D. Minna, Yang Xie, Ling Cai

Deep Learning-Based Automated Measurement of Murine Bone Length in Radiographs

Bioengineering(2024)10.3390/bioengineering11070670

N/A

0.104DataRank · unranked

1 citations

Kristin Denton, Kevin W. Jin, Peiran Quan, Zhuoyu Wen, Julia Kozlitina +9 more

SMIXnorm: Fast and Accurate RNA-Seq Data Normalization for Formalin-Fixed Paraffin-Embedded Samples

Frontiers in Genetics(2021)10.3389/fgene.2021.650795

N/A

0DataRank · unranked

9 citations

Xiaowei Zhan, Bo Yao, Guanghua Xiao, Xinlei Wang, Yang Xie +1 more

Sprod for De-noising Spatial Transcriptomics Data Based on Position and Image Information

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.03.467103

N/A

0DataRank · unranked

4 citations

Bing Song, Shidan Wang, Mingyi Chen, Yang Xie, Guanghua Xiao +2 more

Deep Learning of Rhabdomyosarcoma Pathology Images for Classification and Survival Outcome Prediction

American Journal Of Pathology(2022)10.1016/j.ajpath.2022.03.011

N/A

0DataRank · unranked

34 citations

Shidan Wang, Erin R. Rudzinski, Saloni Agarwal, Ruichen Rong, Donald A. Barkauskas +7 more

A Bayesian modified Ising model for identifying spatially variable genes from spatial transcriptomics data

Statistics in Medicine(2022)10.1002/sim.9530

N/A

0DataRank · unranked

29 citations

Guanghua Xiao, Qiwei Li, Xi Jiang

Global chromatin landscapes identify candidate noncoding modifiers of cardiac rhythm

Journal of Clinical Investigation(2022)10.1172/jci153635

N/A

0DataRank · unranked

8 citations

Rahul K. Kollipara, Gabriela Orquera-Tornakian, Sean C. Goetsch, Minzhe Zhang, Cameron Perry +11 more

SAFARI: shape analysis for AI-segmented images

BMC Medical Imaging(2022)10.1186/s12880-022-00849-8

N/A

0DataRank · unranked

6 citations

Shengjie Yang, Sy Han Chiou, Chul Moon, Cong Zhang, Bo Yao +3 more

A Deep Learning Approach for Histology-Based Nuclei Segmentation and Tumor Microenvironment Characterization

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.08.519641

N/A

0DataRank · unranked

2 citations

Hudanyun Sheng, Kevin W. Jin, Fangjiang Wu, Danni Luo, Zhuoyu Wen +10 more

A comparative study of neuroendocrine heterogeneity in SCLC and NBL

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.17.516959

N/A

0DataRank · unranked

1 citations

Ralph J. DeBerardinis, Yang Xie, John D. Minna, Guanghua Xiao, Ling Cai

Deep Learning–Based H-Score Quantification of Immunohistochemistry-Stained Images

Modern Pathology(2023)10.1016/j.modpat.2023.100398

N/A

0DataRank · unranked

92 citations

Danni Luo, Shidan Wang, Ruichen Rong, Bret M. Evers, Liwei Jia +16 more

A Deep Learning Approach for Histology-Based Nucleus Segmentation and Tumor Microenvironment Characterization

Modern Pathology(2023)10.1016/j.modpat.2023.100196

N/A

0DataRank · unranked

72 citations

Hudanyun Sheng, Kevin W. Jin, Fangjiang Wu, Danni Luo, Zhuoyu Wen +10 more

Deep learning of cell spatial organizations identifies clinically relevant insights in tissue images

Nature Communications(2023)10.1038/s41467-023-43172-8

N/A

0DataRank · unranked

41 citations

Ruichen Rong, Qin Zhou, Donghan M. Yang, Xinyi Zhang, Xiaowei Zhan +10 more

Deep learning‐based pathology image analysis predicts cancer progression risk in patients with oral leukoplakia

Cancer Medicine(2023)10.1002/cam4.5478

N/A

0DataRank · unranked

40 citations

Frederico O. Gleber‐Netto, Shidan Wang, Roberta Rayra Martins‐Chaves, Ricardo Santiago Gomez, Nadarajah Vigneswaran +15 more

Enhanced Pathology Image Quality with Restore–Generative Adversarial Network

American Journal Of Pathology(2023)10.1016/j.ajpath.2022.12.011

N/A

0DataRank · unranked

29 citations

Shidan Wang, Xinyi Zhang, Zhuoyu Wen, Xian Wu Cheng, Liwei Jia +5 more

Artificial intelligence in mental healthcare: an overview and future perspectives

British Journal of Radiology(2023)10.1259/bjr.20230213

N/A

0DataRank · unranked

29 citations

Qiwei Li, Yang Xie, Guanghua Xiao, Kevin W. Jin

Features of tumor-microenvironment images predict targeted therapy survival benefit in patients with EGFR-mutant lung cancer

Journal of Clinical Investigation(2023)10.1172/jci160330

N/A

0DataRank · unranked

21 citations

Ruichen Rong, Donghan M. Yang, Junya Fujimoto, Justin A. Bishop, Shirley Yan +15 more

Unsupervised domain adaptation for nuclei segmentation: Adapting from hematoxylin & eosin stained slides to immunohistochemistry stained slides using a curriculum approach

Computer Methods and Programs in Biomedicine(2023)10.1016/j.cmpb.2023.107768

N/A

0DataRank · unranked

12 citations

Ruichen Rong, Zifan Gu, Junya Fujimoto, Xiaowei Zhan, Yang Xie +2 more

A Deep Learning Onion Peeling Approach to Measure Oral Epithelium Layer Number

Cancers(2023)10.3390/cancers15153891

N/A

0DataRank · unranked

10 citations

Frederico O. Gleber‐Netto, Shidan Wang, Kevin W. Jin, Donghan M. Yang, Ann M. Gillenwater +5 more

Erratum: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

Nature Communications(2016)10.1038/ncomms13205

N/A

0DataRank · unranked

0 citations

Fan Zhu, Javier García-García, Eli Stahl, Abhishek Pratap, Gaurav Pandey +113 more

Reconstructing Spatial Transcriptomics at the Single-cell Resolution with BayesDeep

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.07.570715

N/A

0DataRank · unranked

5 citations

Lei Dong, Shidan Wang, Zhuoyu Wen, Mingyi Chen, Lin Xu +3 more

Integrating Image and Molecular Profiles for Spatial Transcriptomics Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.18.545488

N/A

0DataRank · unranked

4 citations

Shidan Wang, Lei Guo, Zhuoyu Wen, Liwei Jia, Lin Xu +3 more

Data from Computational Staining of Pathology Images to Study the Tumor Microenvironment in Lung Cancer

(2023)10.1158/0008-5472.c.6511499.v1

Top 100%

0DataRank

Top 100%0 citations

Ruichen Rong, Donghan M. Yang, Junya Fujimoto, Shirley Yan, Ling Cai +11 more

Deep Learning of Cell Spatial Organizations Identifies Clinically Relevant Insights in Tissue Images

Research Square(2023)10.21203/rs.3.rs-2928838/v1

N/A

0DataRank · unranked

0 citations

Shidan Wang, Ruichen Rong, Donghan M. Yang, Xinyi Zhang, Xiaowei Zhan +8 more

ScopeViewer: A Browser-Based Solution for Visualizing Spatial Transcriptomics Data

Tiempo de paz(2023)10.1101/2023.07.24.549256

N/A

0DataRank · unranked

0 citations

Sophie Robertson, Yuanchun Zhan, Ruichen Rong, Shidan Wang, Xi Jiang +7 more

iIMPACT: integrating image and molecular profiles for spatial transcriptomics analysis

Genome biology(2024)10.1186/s13059-024-03289-5

N/A

0DataRank · unranked

25 citations

Shidan Wang, Lei Guo, Bencong Zhu, Zhuoyu Wen, Liwei Jia +4 more

BayeSMART: Bayesian clustering of multi-sample spatially resolved transcriptomics data

Briefings in Bioinformatics(2024)10.1093/bib/bbae524

N/A

0DataRank · unranked

7 citations

Bencong Zhu, Chen Tang, Ruichen Rong, Ying Ma, Guanghua Xiao +3 more

Nodal Yield From Neck Dissection Predicts the Anti‐Tumor Immune Response in Head and Neck Cancers

Head & Neck(2024)10.1002/hed.28006

N/A

0DataRank · unranked

1 citations

Justin M. Pyne, Yu‐Lun Liu, Youstina Abraham, Zhuoyu Wen, Doreen N. Palsgrove +13 more

Liver cancer initiation is dependent on metabolic zonation but decoupled from premalignant clonal expansion

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.10.575013

N/A

0DataRank · unranked

3 citations

Jason Guo, Yunguan Wang, Yuemeng Jia, Natasha Corbitt, Lin Li +8 more

Cooperative integration of spatially resolved multi-omics data with COSMOS

Nature Communications(2025)10.1038/s41467-024-55204-y

N/A

0DataRank · unranked

40 citations

Xue Xiao, Lei Dong, Chen Tang, Guanghua Xiao, Lin Xu +1 more

The origin of hepatocellular carcinoma depends on metabolic zonation

Science(2025)10.1126/science.adv7129

N/A

0DataRank · unranked

15 citations

Roger J. Liang, Andrew Chung, Zhijie Li, Boyuan Li, Eric Chen +22 more

A deep learning model for clinical outcome prediction using longitudinal inpatient electronic health records

JAMIA Open(2025)10.1093/jamiaopen/ooaf026

N/A

0DataRank · unranked

12 citations

Zifan Gu, Hongyin Lai, Tanna L. Nelson, Tony Keller, Clark Walker +9 more

Image-based inference of tumor cell trajectories enables large-scale cancer progression analysis

Science Advances(2025)10.1126/sciadv.adv9466

N/A

0DataRank · unranked

5 citations

Ling Cai, Ruichen Rong, Shidan Wang, Liwei Jia, Peiran Quan +4 more

Dimensionality reduction for visualizing spatially resolved profiling data using SpaSNE

GigaScience(2025)10.1093/gigascience/giaf002

N/A

0DataRank · unranked

3 citations

Chen Tang, Xue Xiao, Xiaowei Zhan, Tao Wang, Guanghua Xiao +2 more

Deep-Learning-Based Hepatic Ploidy Quantification Using H&E Histopathology Images

Genes(2023)10.3390/genes14040921

N/A

0DataRank · unranked

5 citations

Yu-Hsuan Lin, Shidan Wang, Naoto Fujiwara, Ruichen Rong, Kevin W. Jin +9 more

VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007511

N/A

0DataRank · unranked

77 citations

David E. Greenberg, Reed Pifer, Shuang Jiang, Guanghua Xiao, Samuel A. Shelburne +4 more

Molecular differences across invasive lung adenocarcinoma morphological subgroups

Translational Lung Cancer Research(2020)10.21037/tlcr-19-321

N/A

0DataRank · unranked

22 citations

Donghan M. Yang, Ling Cai, Lin Yang, Luc Girard, Junya Fujimoto +6 more

Bayesian multiple instance regression for modeling immunogenic neoantigens

Statistical Methods in Medical Research(2020)10.1177/0962280220914321

N/A

0DataRank · unranked

12 citations

Xinlei Wang, Johan Lim, Guanghua Xiao, Tianshi Lu, Tao Wang +1 more

HARMONIES: A Hybrid Approach for Microbiome Networks Inference via Exploiting Sparsity

Frontiers in Genetics(2020)10.3389/fgene.2020.00445

N/A

0DataRank · unranked

37 citations

Guanghua Xiao, Andrew Y. Koh, Yingfei Chen, Bo Yao, Qiwei Li +2 more

A Blood-Based Screening Tool for Alzheimer's Disease That Spans Serum and Plasma: Findings from TARC and ADNI

UNC Libraries(2020)10.17615/ttj2-p068

N/A

0DataRank · unranked

0 citations

Neill R. Graff‐Radford, Ramon Diaz‐Arrastia, Ryan M. Huebinger, Guanghua Xiao, Rachelle S. Doody +4 more

MANUSCRIPT IN PRESS: DEMENTIA & GERIATRIC COGNITIVE DISORDERS: Molecular Neuropsychology: Creation of Test-Specific Blood Biomarker Algorithms

UNC Libraries(2020)10.17615/xks6-0t36

N/A

0DataRank · unranked

0 citations

Ramon Diaz‐Arrastia, Paula Grammas, Wilhelmsen, Kirk, Robert C. Barber, Munro Cullum +6 more

Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease

UNC Libraries(2020)10.17615/ka8q-bk87

Top 100%

0DataRank

Top 100%0 citations

Corrado Priami, Jimit Doshi, Roland Krause, Kong, Dehan, Aristeidis Sotiras +95 more

Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease

UNC Libraries(2020)10.17615/htpk-dq17

Top 100%

0DataRank

Top 100%0 citations

E.T. Merrill, Qilin Dong, Xia Shen, Laura Caberlotto, Arno Klein +95 more

Cell-autonomous immune gene expression is repressed in pulmonary neuroendocrine cells and small cell lung cancer

Communications Biology(2021)10.1038/s42003-021-01842-7

N/A

0DataRank · unranked

101 citations

Hongyu Liu, Fang Huang, Junya Fujimoto, Luc Girard, Jun Chen +25 more

Bayesian modeling of spatial molecular profiling data via Gaussian process

Bioinformatics(2021)10.1093/bioinformatics/btab455

N/A

0DataRank · unranked

71 citations

Minzhe Zhang, Yang Xie, Guanghua Xiao, Qiwei Li

MB-GAN: Microbiome Simulation via Generative Adversarial Network

GigaScience(2021)10.1093/gigascience/giab005

N/A

0DataRank · unranked

49 citations

Shuang Jiang, Lin Xu, Guanghua Xiao, Yang Xie, Dajiang J. Liu +3 more

Evaluating short-term forecasting of COVID-19 cases among different epidemiological models under a Bayesian framework

GigaScience(2021)10.1093/gigascience/giab009

N/A

0DataRank · unranked

20 citations

Tejasv Bedi, Christoph U. Lehmann, Guanghua Xiao, Yang Xie, Qiwei Li

Guanghua Xiao

Indexed papers

Top data-sharing exemplar

Papers