Debora S. Marks

Harvard University

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.7Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays

Genome biology(2025)10.1186/s13059-025-03476-y

Top 12%

1.7DataRank

Top 12%70 citations

Jeremy Stone, Aisha Haley Bianchi, Benjamin J. Capodanno, Estelle Y. Da, Mafalda Dias +23 more

Papers

Driven by 41 papers — median percentile 83. Top paper: “Multiplexed measurement of variant abundance and activity reveals VKOR topology, active site and human variant impact”.

Multiplexed measurement of variant abundance and activity reveals VKOR topology, active site and human variant impact

eLife(2020)10.7554/elife.58026

N/A

2.2DataRank · unranked

103 citations

Nathan Rollins, Jason J. Stephany, Katherine A. Sitko, Kenneth A. Matreyek, Marta Verby +7 more

MaveDB 2024: a curated community database with over seven million variant effects from multiplexed functional assays

Genome biology(2025)10.1186/s13059-025-03476-y

Top 12%

1.7DataRank

Top 12%70 citations

Jeremy Stone, Aisha Haley Bianchi, Benjamin J. Capodanno, Estelle Y. Da, Mafalda Dias +23 more

Protein design using structure-based residue preferences

Nature Communications(2024)10.1038/s41467-024-45621-4

N/A

1.3DataRank · unranked

40 citations

Ada Y. Shaw, Sam Sinai, Nathan Rollins, Noam Prywes, David F. Savage +3 more

MaveDB v2: a curated community database with over three million variant effects from multiplexed functional assays

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.29.470445

Top 21%

0.975DataRank

Top 21%28 citations

Joseph Min, Nathan Rollins, Estelle Y. Da, Daniel Esposito, Matthew Harrington +19 more

A deep learning algorithm to predict risk of pancreatic cancer from disease trajectories

Nature Medicine(2023)10.1038/s41591-023-02332-5

N/A

0.859DataRank · unranked

306 citations

Bo Yuan, Jessica X. Hjaltelin, Chunlei Zheng, Amalie Dahl Haue, Piotr Jaroslaw Chmura +22 more

Guidelines for releasing a variant effect predictor

Genome biology(2025)10.1186/s13059-025-03572-z

N/A

0.500DataRank · unranked

27 citations

Mihaly Badonyi, Mafalda Dias, Jonathan Frazer, Sushant Kumar, Kresten Lindorff‐Larsen +13 more

Pancreatic cancer risk predicted from disease trajectories using deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.27.449937

N/A

0.434DataRank · unranked

17 citations

Bo Yuan, Jessica X. Hjaltelin, Chunlei Zheng, Chen Yuan, Jihye Kim +22 more

Simultaneous enhancement of multiple functional properties using evolution-informed protein design

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.09.539914

N/A

0.312DataRank · unranked

7 citations

Ian Truebridge, Yang Su, Adam J. Riesselman, John Ingraham, Alessandro Passera +12 more

An ANXA11 P93S variant dysregulates TDP-43 and causes corticobasal syndrome

Research Square(2023)10.21203/rs.3.rs-3462973/v1

N/A

0.312DataRank · unranked

7 citations

Veronica H. Ryan, James Hawrot, Sydney Lawton, Daniel M. Ramos, Yue Qi +16 more

Co-evolution of interacting proteins through non-contacting and non-specific mutations

Nature Ecology & Evolution(2022)10.1038/s41559-022-01688-0

N/A

0DataRank · unranked

49 citations

Anna G. Green, Boyuan Wang, Thúy-Lan Võ Lite, Eli N. Weinstein, Debora S. Marks +2 more

High-Content Screening and Computational Prediction Reveal Viral Genes That Suppress the Innate Immune Response

mSystems(2022)10.1128/msystems.01466-21

N/A

0DataRank · unranked

10 citations

Erika J. Olson, Tae Yeon Yoo, H. Sloane Weiss, Yukiye Koide, Peter D. Koch +14 more

The SpoVA membrane complex is required for dipicolinic acid import during sporulation and export during germination

Genes & Development(2022)10.1101/gad.349488.122

N/A

0DataRank · unranked

42 citations

Rocío del Carmen Barajas‐Ornelas, Jeremy D. Amon, Fernando H. Ramírez‐Guadiana, Assaf Alon, Kelly P. Brock +4 more

Mechanical gating of the auditory transduction channel TMC1 involves the fourth and sixth transmembrane helices

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2021.12.30.474567

N/A

0DataRank · unranked

3 citations

K. Domenica Karavitaki, Bifeng Pan, Panos I. Tamvakologos, Kelly P. Brock, Yaqiao Li +3 more

The relaxin receptor RXFP1 signals through a mechanism of autoinhibition

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.22.477343

N/A

0DataRank · unranked

3 citations

Shaun Rawson, James Osei‐Owusu, Kelly P. Brock, Xinyue Liu, Joao A. Paulo +6 more

An in silico method to assess antibody fragment polyreactivity

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.12.476085

N/A

0DataRank · unranked

2 citations

Jung-Eun Shin, Meredith A. Skiba, Genevieve R. Nemeth, Joseph D. Hurley, Alon Wellner +7 more

Coordination of bacterial cell wall and outer membrane biosynthesis

Nature(2023)10.1038/s41586-023-05750-0

N/A

0DataRank · unranked

84 citations

Samuel P. Berry, Zhaoqi Li, Atsushi Taguchi, Joseph Min, Suzanne Walker +3 more

The relaxin receptor RXFP1 signals through a mechanism of autoinhibition

Nature Chemical Biology(2023)10.1038/s41589-023-01321-6

N/A

0DataRank · unranked

28 citations

Shaun Rawson, James Osei‐Owusu, Kelly P. Brock, Xinyue Liu, Joao A. Paulo +6 more

ProteinGym: Large-Scale Benchmarks for Protein Design and Fitness Prediction

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.07.570727

N/A

0DataRank · unranked

210 citations

Aaron W. Kollasch, Daniel P. Ritter, Lood van Niekerk, Steffan B. Paul, Hansen Spinner +10 more

ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.06.570473

N/A

0DataRank · unranked

24 citations

Ruben Weitzman, Debora S. Marks, Yarin Gal, Pascal Notin

Proteome-wide model for human disease genetics

medRxiv(2023)10.1101/2023.11.27.23299062

N/A

0DataRank · unranked

17 citations

Courtney A. Shearer, Aaron W. Kollasch, Hansen Spinner, Thomas A. Hopf, Lood van Niekerk +5 more

Continuous evolution of user-defined genes at 1-million-times the genomic mutation rate

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.13.566922

N/A

0DataRank · unranked

9 citations

Rory L. Williams, Hansen Spinner, Vincent J. Hu, Debora S. Marks, Chang C. Liu +1 more

GPR161 structure uncovers the redundant role of sterol-regulated ciliary cAMP signaling in the Hedgehog pathway

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.23.540554

N/A

0DataRank · unranked

7 citations

Simone Harrison, Sun‐Hee Hwang, Zi-Wei Chen, Masha Karelina, Ishan Deshpande +14 more

scPerturb: harmonized single-cell perturbation data

Nature Methods(2024)10.1038/s41592-023-02144-y

N/A

0DataRank · unranked

157 citations

Tessa D. Green, Ciyue Shen, Torsten Groß, Joseph Min, Samuele Garda +8 more

Continuous evolution of user-defined genes at 1 million times the genomic mutation rate

Science(2024)10.1126/science.adm9073

N/A

0DataRank · unranked

60 citations

Rory L. Williams, Vincent J. Hu, Aviv Spinner, Alexander Pisera, Debora S. Marks +2 more

GPR161 structure uncovers the redundant role of sterol-regulated ciliary cAMP signaling in the Hedgehog pathway

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01223-8

N/A

0DataRank · unranked

37 citations

Simone Harrison, Sun‐Hee Hwang, Zi-Wei Chen, Masha Karelina, Ishan Deshpande +14 more

Simultaneous enhancement of multiple functional properties using evolution-informed protein design

Nature Communications(2024)10.1038/s41467-024-49119-x

N/A

0DataRank · unranked

28 citations

Yang Su, Ian Truebridge, Adam J. Riesselman, John Ingraham, Alessandro Passera +12 more

An ANXA11 P93S variant dysregulates TDP‐43 and causes corticobasal syndrome

Alzheimer s & Dementia(2024)10.1002/alz.13915

N/A

0DataRank · unranked

18 citations

Veronica H. Ryan, James Hawrot, Sydney Lawton, Daniel M. Ramos, Yue Qi +16 more

Deep mutational scanning of hepatitis B virus reveals a mechanism for cis-preferential reverse transcription

Cell(2024)10.1016/j.cell.2024.04.008

N/A

0DataRank · unranked

12 citations

Maximilian A. Kass, Mengyin Zhang, Noor Youssef, Catherine A. Freije, Kelly P. Brock +10 more

Toward trustable use of machine learning models of variant effects in the clinic

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2024.10.011

N/A

0DataRank · unranked

9 citations

Rose Orenbuch, Debora S. Marks, Jonathan Frazer, Mafalda Dias

Deep generative modeling of the human proteome reveals over a hundred novel genes involved in rare genetic disorders

Research Square(2024)10.21203/rs.3.rs-3740259/v1

N/A

0DataRank · unranked

5 citations

Rose Orenbuch, Aaron W. Kollasch, Hansen Spinner, Courtney A. Shearer, Thomas A. Hopf +4 more

Evolutionary-scale enzymology enables exploration of a rugged catalytic landscape

Science(2025)10.1126/science.adu1058

N/A

0DataRank · unranked

23 citations

Garrison P. R. Asper, Pascal Notin, Jacob A. Posner, Debora S. Marks, Michael J. Keiser +2 more

Computationally designed proteins mimic antibody immune evasion in viral evolution

Immunity(2025)10.1016/j.immuni.2025.04.015

N/A

0DataRank · unranked

20 citations

Sarah F. Gurev, Fadi Ghantous, Kelly P. Brock, Javier A. Jaimes, Nicole N. Thadani +18 more

Proteome-wide model for human disease genetics

Nature Genetics(2025)10.1038/s41588-025-02400-1

N/A

0DataRank · unranked

19 citations

Courtney A. Shearer, Aaron W. Kollasch, Aviv D. Spinner, Thomas A. Hopf, Lood van Niekerk +5 more

Structural coordination of polymerization and crosslinking by a SEDS–bPBP peptidoglycan synthase complex

Nature Microbiology(2020)10.1038/s41564-020-0687-z

N/A

0DataRank · unranked

143 citations

Patricia D. A. Rohs, Morgan S. A. Gilman, Sarah C. Erlandson, Sanduo Zheng, Anna G. Green +9 more

Rapid generation of potent antibodies by autonomous hypermutation in yeast

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.11.378778

N/A

0DataRank · unranked

26 citations

Conor McMahon, Morgan S. A. Gilman, Jonathan R. Clements, Sarah A. Clark, Kianna M. Nguyen +12 more

Multiplexed measurement of variant abundance and activity reveals VKOR topology, active site and human variant impact

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.10.087312

N/A

0DataRank · unranked

2 citations

Nathan Rollins, Jason J. Stephany, Katherine A. Sitko, Kenneth A. Matreyek, Marta Verby +7 more

Protein design and variant prediction using autoregressive generative models

Nature Communications(2021)10.1038/s41467-021-22732-w

N/A

0DataRank · unranked

354 citations

Adam J. Riesselman, Aaron W. Kollasch, Conor McMahon, Elana P. Simon, Chris Sander +4 more

Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences

Nature Communications(2021)10.1038/s41467-021-21636-z

N/A

0DataRank · unranked

139 citations

Hadeer Elhabashy, Kelly P. Brock, Rohan Maddamsetti, Oliver Kohlbacher, Debora S. Marks +1 more

Rapid generation of potent antibodies by autonomous hypermutation in yeast

Nature Chemical Biology(2021)10.1038/s41589-021-00832-4

N/A

0DataRank · unranked

134 citations

Conor McMahon, Morgan S. A. Gilman, Jonathan R. Clements, Sarah A. Clark, Kianna M. Nguyen +13 more

High content screening and computational prediction reveal viral genes that suppress innate immune response

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.14.472572

N/A

0DataRank · unranked

0 citations

Erika J. Olson, Tae Yeon Yoo, H. Sloane Weiss, Yukiye Koide, Peter D. Koch +13 more

An in silico method to assess antibody fragment polyreactivity

Nature Communications(2022)10.1038/s41467-022-35276-4

N/A

0DataRank · unranked

62 citations

Jung-Eun Shin, Meredith A. Skiba, Genevieve R. Nemeth, Joseph D. Hurley, Alon Wellner +7 more

Debora S. Marks

Indexed papers

Top data-sharing exemplar

Papers