🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Fostering Data Sharing

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Fostering Data Sharing

Empowering the data sharing that empowers science — an open, citation-grounded index for datasets.

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Authors
Julia Carnevale

Julia Carnevale

Gladstone Institutes

ORCID: 0000-0001-9410-7148

Also affiliated with University of California, San Francisco, Parker Institute for Cancer Immunotherapy, UCSF Helen Diller Family Comprehensive Cancer Center

MedicineBiochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 13 papers. Top paper: “Genome-wide CRISPR screens of T cell exhaustion identify chromatin remodeling factors that limit T cell persistence”.

Genome-wide CRISPR screens of T cell exhaustion identify chromatin remodeling factors that limit T cell persistence

Cancer Cell(2022)10.1016/j.ccell.2022.06.001

N/A

6.5DataRank · unranked

360 citations

Winnie Yao, Nghi Ly, Katherine A. Freitas, Yanting Chen, Quanming Shi +15 more

Discovering dominant tumor immune archetypes in a pan-cancer census

Cell(2021)10.1016/j.cell.2021.12.004

N/A

4.2DataRank · unranked

176 citations

Bushra Samad, Jessica Tsui, Nayvin W. Chew, Peter Yan, Gabriella C. Reeder +75 more

Resistance to ATR Inhibitors Is Mediated by Loss of the Nonsense-Mediated Decay Factor UPF2

Cancer Research(2022)10.1158/0008-5472.can-21-4335

N/A

0.884DataRank · unranked

28 citations

Huadong Chen, Yagmur U. Doruk, Tess Williamson, Benjamin J. Polacco, Andrew S. McNeal +13 more

RASA2 ablation in T cells boosts antigen sensitivity and long-term function

Nature(2022)10.1038/s41586-022-05126-w

N/A

0.816DataRank · unranked

230 citations

Eric Shifrut, Nupura Kale, William A. Nyberg, Franziska Blaeschke, Yan Yi Chen +28 more

Genome-wide CRISPR screens of T cell exhaustion identify chromatin remodeling factors that limit T cell persistence

10.1101/2022.04.20.488974

N/A

0.542DataRank · unranked

36 citations

Winnie Yao, Nghi Ly, Katherine A. Freitas, Yan-Ting Chen, Quanming Shi +14 more

Central control of dynamic gene circuits governs T cell rest and activation

Nature(2024)10.1038/s41586-024-08314-y

N/A

0.494DataRank · unranked

26 citations

Jennifer M. Umhoefer, Nadia Arang, Sivakanthan Kasinathan, Jacob W. Freimer, Zachary Steinhart +18 more

Integrated epigenetic and genetic programming of primary human T cells

Nature Biotechnology(2025)10.1038/s41587-025-02856-w

N/A

0.464DataRank · unranked

21 citations

Alvin Ha, Ashir A. Borah, Jennifer M. Umhoefer, Lauren Chow, Carinna Tran +18 more

Understanding TCR T cell knockout behavior using interpretable machine learning

PubMed(2024)10.1142/9789819807024_0028

N/A

0DataRank · unranked

1 citations

Archit Verma, Stefanie Bachl, Julia Carnevale, Barbara E. Engelhardt, Marcus Blennemann

Exploitable mechanisms of antibody and CAR mediated macrophage cytotoxicity

Nature Communications(2025)10.1038/s41467-025-60745-x

N/A

0DataRank · unranked

4 citations

Meng Zhang, Tatyanah Farsh, Haolong Li, Audrey Kishishita, Abhilash Barpanda +22 more

Base-editing a single missense mutation in A20 enhances CAR-T cell efficacy

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.05.680562

N/A

0DataRank · unranked

0 citations

Stefanie Bachl, Luis R Sandoval, Carter Ching, Christopher Bowman, Nupura Kale +22 more

Modular pooled discovery of synthetic knockin sequences to program durable cell therapies

Cell(2023)10.1016/j.cell.2023.08.013

N/A

0DataRank · unranked

65 citations

Yan Yi Chen, Ryan Apathy, Bence Dániel, Andy Y. Chen, Peixin Amy Chen +21 more

Hypoxia is a dominant remodeler of the CD8 + T cell surface proteome relative to activation and regulatory T cell-mediated suppression

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.07.447379

N/A

0DataRank · unranked

0 citations

Amy M. Weeks, Eric Shifrut, Julia Carnevale, Lisa L. Kirkemo, Alan Ashworth +3 more

Data from Resistance to ATR Inhibitors Is Mediated by Loss of the Nonsense-Mediated Decay Factor UPF2

(2023)10.1158/0008-5472.c.6513989

N/A

0DataRank · unranked

0 citations

Huadong Chen, Yagmur U. Doruk, Tess Williamson, Benjamin J. Polacco, Andrew S. McNeal +13 more