Juan I. Fuxman Bass

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.8Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Compendium of human transcription factor effector domains

Molecular Cell(2021)10.1016/j.molcel.2021.11.007

Top 8%

2.8DataRank

Top 8%136 citations

Zhaorong Li, Clarissa Santoso, Anna Berenson, Isabella Ho, Vivian Shen +3 more

Papers

Driven by 29 papers — median percentile 80. Top paper: “Compendium of human transcription factor effector domains”.

Compendium of human transcription factor effector domains

Molecular Cell(2021)10.1016/j.molcel.2021.11.007

Top 8%

2.8DataRank

Top 8%136 citations

Zhaorong Li, Clarissa Santoso, Anna Berenson, Isabella Ho, Vivian Shen +3 more

Comprehensive mapping of the human cytokine gene regulatory network

Nucleic Acids Research(2020)10.1093/nar/gkaa1055

Top 20%

0.997DataRank

Top 20%43 citations

Zhaorong Li, Sneha Lal, Samson Yuan, Kok Ann Gan, Luis M. Agosto +7 more

Therapeutic Targeting of Transcription Factors to Control the Cytokine Release Syndrome in COVID-19

Frontiers in Pharmacology(2021)10.3389/fphar.2021.673485

N/A

0.781DataRank · unranked

13 citations

Zhaorong Li, Jaice T. Rottenberg, Xing Liu, Vivian Shen, Juan I. Fuxman Bass +1 more

Human Virus Transcriptional Regulators

Cell(2020)10.1016/j.cell.2020.06.023

N/A

0.677DataRank · unranked

90 citations

Ted Hong, Sreeja Parameswaran, Kevin Ernst, Ivan Marazzi, Matthew T. Weirauch +2 more

A large-scale cancer-specific protein–DNA interaction network

Life Science Alliance(2024)10.26508/lsa.202402641

N/A

0.360DataRank · unranked

10 citations

Anna Berenson, Ryan Lane, Isabelle Guelin, Zhaorong Li, Yilin Chen +6 more

In vitro Targeting of Transcription Factors to Control the Cytokine Release Syndrome in COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.29.424728

N/A

0.312DataRank · unranked

7 citations

Zhaorong Li, Jaice T. Rottenberg, Xing Liu, Vivian Shen, Juan I. Fuxman Bass +1 more

Genome-wide characterization of human minisatellite VNTRs: population-specific alleles and gene expression differences

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.03.367367

N/A

0.269DataRank · unranked

5 citations

Yözen Hernández, Samantha D. Drinan, Juan I. Fuxman Bass, Gary Benson, Marzieh Eslami Rasekh

Epitope-Evaluator: an interactive web application to study predicted T-cell epitopes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.09.491119

N/A

0.208DataRank · unranked

3 citations

David Requena, Juan I. Fuxman Bass, Luis F. Soto

Applications of high-throughput reporter assays to gene regulation studies

Current Opinion in Structural Biology(2025)10.1016/j.sbi.2025.103105

N/A

0.208DataRank · unranked

3 citations

Juan I. Fuxman Bass, Benedetta D’Elia

Transcription factors in the development and treatment of immune disorders

Transcription(2023)10.1080/21541264.2023.2294623

N/A

0DataRank · unranked

13 citations

P. Bass, Juan I. Fuxman Bass, Samantha D. Patalano

Identification of conserved skeletal enhancers associated with craniosynostosis risk genes

Human Molecular Genetics(2023)10.1093/hmg/ddad182

N/A

0DataRank · unranked

4 citations

Anna Berenson, Michelle Bernard, Christopher R. Weber, Laura Cook, Axel Visel +3 more

Paired yeast one-hybrid assays to detect DNA-binding cooperativity and antagonism across transcription factors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.14.536894

N/A

0DataRank · unranked

0 citations

Ryan Lane, Luis F. Soto, Mahir Patel, Cosmin Ciausu, Zhaorong Li +10 more

Viral cis-regulatory elements as sensors of cellular states and environmental cues

Trends in Genetics(2024)10.1016/j.tig.2024.05.004

N/A

0DataRank · unranked

1 citations

Tommy Henry Taslim, Luis F. Soto-Ugaldi, Lucía Martínez Cuesta, Camila Martinez-Calejman, Juan I. Fuxman Bass +1 more

Widespread variation in molecular interactions and regulatory properties among transcription factor isoforms

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.12.584681

N/A

0DataRank · unranked

11 citations

Kaia Mattioli, Clarissa Santoso, Gloria Sheynkman, Sachi Inukai, Babita Kaundal +29 more

Semi-Automatic Detection of Errors in Genome-Scale Metabolic Models

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.24.600481

N/A

0DataRank · unranked

1 citations

Justin Reimertz, Daniel Segrè, Juan I. Fuxman Bass, Devlin C. Moyer

A large-scale cancer-specific protein-DNA interaction network

Medical Entomology and Zoology(2024)10.1101/2024.01.24.577099

Top 100%

0DataRank

Top 100%0 citations

Anna Berenson, Ryan Lane, Isabelle Guelin, Zhaorong Li, Yilin Chen +6 more

Widespread variation in molecular interactions and regulatory properties among transcription factor isoforms

Molecular Cell(2025)10.1016/j.molcel.2025.03.004

N/A

0DataRank · unranked

35 citations

Kaia Mattioli, Clarissa Santoso, Gloria Sheynkman, Sachi Inukai, Babita Kaundal +33 more

Flux sampling and context-specific genome-scale metabolic models for biotechnological applications

Trends in biotechnology(2025)10.1016/j.tibtech.2025.07.010

N/A

0DataRank · unranked

3 citations

Justin Reimertz, Juan I. Fuxman Bass, Daniel Segrè, Devlin C. Moyer

A Roadmap for the Future of Systems Biology in Cancer Research

Cancer Research(2025)10.1158/0008-5472.can-25-0700

N/A

0DataRank · unranked

2 citations

Carlos F. Lopez, Andréi S. Rodin, Russell C. Rockne, Thomas E. Yankeelov, Herbert M Sauro +23 more

Global cis-regulatory landscape of double-stranded DNA viruses

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.20.665756

N/A

0DataRank · unranked

1 citations

Joseph Alexander Finkelberg, Susan Kales, Luis F. Soto-Ugaldi, Benedetta D’Elia, Burhan Engіn +11 more

ICARus: a pipeline to extract robust gene expression signatures from transcriptome datasets

Frontiers in Bioinformatics(2025)10.3389/fbinf.2025.1604418

N/A

0DataRank · unranked

0 citations

Juan I. Fuxman Bass, Zhaorong Li

Prediction of genome-wide effects of single nucleotide variants on transcription factor binding

Scientific Reports(2020)10.1038/s41598-020-74793-4

N/A

0DataRank · unranked

18 citations

Katia Bulekova, Brian Gregor, Adam Labadorf, Juan I. Fuxman Bass, Sebastian Carrasco Pro

Genome-wide characterization of human minisatellite VNTRs: population-specific alleles and gene expression differences

Nucleic Acids Research(2021)10.1093/nar/gkab224

N/A

0DataRank · unranked

35 citations

Yözen Hernández, Samantha D. Drinan, Juan I. Fuxman Bass, Gary Benson, Marzieh Eslami Rasekh

Intragenic proviral elements support transcription of defective HIV-1 proviruses

PLoS Pathogens(2021)10.1371/journal.ppat.1009982

N/A

0DataRank · unranked

20 citations

Elise Armstrong, Brandy Bernabe, Carolyn Coote, Anna Berenson, Samantha D. Patalano +6 more

Intragenic proviral elements support transcription of defective HIV-1 proviruses

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.29.462330

N/A

0DataRank · unranked

5 citations

Elise Armstrong, Brandy Bernabe, Carolyn Coote, Anna Berenson, Samantha D. Drinan +6 more

Epitope-Evaluator: An interactive web application to study predicted T-cell epitopes

PLoS ONE(2022)10.1371/journal.pone.0273577

N/A

0DataRank · unranked

8 citations

David Requena, Juan I. Fuxman Bass, Luis F. Soto

Identification of conserved skeletal enhancers associated with craniosynostosis risk genes

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.01.506150

N/A

0DataRank · unranked

0 citations

Anna Berenson, Michelle Bernard, Christopher R. Weber, Juan I. Fuxman Bass, Shannon Fisher +1 more

Paired yeast one-hybrid assays to detect DNA-binding cooperativity and antagonism across transcription factors

Nature Communications(2023)10.1038/s41467-023-42445-6

N/A

0DataRank · unranked

20 citations

Ryan Lane, Luis F. Soto-Ugaldi, Mahir Patel, Cosmin Ciausu, Zhaorong Li +10 more

Widespread perturbation of ETS factor binding sites in cancer

Nature Communications(2023)10.1038/s41467-023-36535-8

N/A

0DataRank · unranked

15 citations

Heather Hook, David A. Bray, Daniel Berenzy, Devlin C. Moyer, Meimei Yin +5 more

Juan I. Fuxman Bass

Indexed papers

Top data-sharing exemplar

Papers