Theodore Alexandrov

Also affiliated with University of California San Diego, La Jolla Bioengineering Institute, European Molecular Biology Laboratory, ViaCyte (United States), European Molecular Biology Laboratory

Biochemistry, Genetics and Molecular BiologyChemistryEnvironmental ScienceEarth and Planetary Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

9.3Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

An atlas of healthy and injured cell states and niches in the human kidney

Nature(2023)10.1038/s41586-023-05769-3

Top 5%

4.4DataRank

Top 5%663 citations

Rajasree Menon, Seth Winfree, Qiwen Hu, Ricardo Melo Ferreira, Kian Kalhor +95 more

Papers

Driven by 25 papers — median percentile 79. Top paper: “Feature-based molecular networking in the GNPS analysis environment”.

Feature-based molecular networking in the GNPS analysis environment

Nature Methods(2020)10.1038/s41592-020-0933-6

N/A

10.9DataRank · unranked

1581 citations

Daniel Petras, Robin Schmid, Kai Dührkop, Johannes Rainer, Abinesh Sarvepalli +57 more

An atlas of healthy and injured cell states and niches in the human kidney

Nature(2023)10.1038/s41586-023-05769-3

Top 5%

4.4DataRank

Top 5%663 citations

Rajasree Menon, Seth Winfree, Qiwen Hu, Ricardo Melo Ferreira, Kian Kalhor +95 more

A reference tissue atlas for the human kidney

Science Advances(2022)10.1126/sciadv.abn4965

Top 5%

4.1DataRank

Top 5%173 citations

Rachel Sealfon, Rajasree Menon, Michael T. Eadon, Blue B. Lake, Becky Steck +40 more

Cadherin-11, Sparc-related modular calcium binding protein-2, and Pigment epithelium-derived factor are promising non-invasive biomarkers of kidney fibrosis

Kidney International(2021)10.1016/j.kint.2021.04.037

N/A

1.7DataRank · unranked

48 citations

Mia R. Colona, Bryan Kestenbaum, Leonidas G. Alexopoulos, Ragnar Pálsson, Anand Srivastava +90 more

How to build the virtual cell with artificial intelligence: Priorities and opportunities

Cell(2024)10.1016/j.cell.2024.11.015

N/A

0.861DataRank · unranked

310 citations

Yusuf Roohani, Yanay Rosen, Ankit Gupta, Xikun Zhang, Marcel Roed +37 more

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

UNC Libraries(2020)10.17615/dd92-mf79

N/A

0.745DataRank · unranked

143 citations

Peng Yao, Kerry L. McPhail, Lixin Zhang, Kathleen Dorrestein, Wenyuan Shi +95 more

Modelling kidney disease using ontology: insights from the Kidney Precision Medicine Project

Nature Reviews Nephrology(2020)10.1038/s41581-020-00335-w

N/A

0.641DataRank · unranked

71 citations

Lucy Lu Wang, Jennifer A. Schaub, John F. O’Toole, Becky Steck, Avi Z. Rosenberg +24 more

Endogenous adenine mediates kidney injury in diabetic models and predicts diabetic kidney disease in patients

Journal of Clinical Investigation(2023)10.1172/jci170341

N/A

0.624DataRank · unranked

63 citations

Guanshi Zhang, Jens Hansen, Petter Bjornstad, Hak Joo Lee, Rajasree Menon +35 more

A user-friendly tool for cloud-based whole slide image segmentation with examples from renal histopathology

Communications Medicine(2022)10.1038/s43856-022-00138-z

N/A

0.587DataRank · unranked

49 citations

David Manthey, Jan U. Becker, Brandon Ginley, Katharina Moos, Jonathan E. Zuckerman +93 more

OffsampleAI: artificial intelligence approach to recognize off-sample mass spectrometry images

BMC Bioinformatics(2020)10.1186/s12859-020-3425-x

N/A

0.581DataRank · unranked

47 citations

Vitaly Kovalev, Lachlan Stuart, Theodore Alexandrov, Katja Ovchinnikova

METASPACE-ML: Context-specific metabolite annotation for imaging mass spectrometry using machine learning

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.29.542736

Top 36%

0.541DataRank

Top 36%11 citations

Lachlan Stuart, Christopher M. Rath, Bernhard Drotleff, S. R. Mamedov, Theodore Alexandrov +1 more

Response Surface Methodology As a New Approach for Finding Optimal MALDI Matrix Spraying Parameters for Mass Spectrometry Imaging

Journal of the American Society for Mass Spectrometry(2020)10.1021/jasms.9b00074

N/A

0.538DataRank · unranked

35 citations

Guanshi Zhang, Dejan Bezbradica, Arunima Bhattacharjee, Ljiljana Paša‐Tolić, Kumar Sharma +4 more

An optimized approach and inflation media for obtaining complimentary mass spectrometry-based omics data from human lung tissue

Frontiers in Molecular Biosciences(2022)10.3389/fmolb.2022.1022775

N/A

0.501DataRank · unranked

10 citations

Olson, Heather M., Marija Veličković, Juan Wang, Jennifer Kyle, Young‐Mo Kim +15 more

Multi-Scalar Data Integration Links Glomerular Angiopoietin-Tie Signaling Pathway Activation With Progression of Diabetic Kidney Disease

Diabetes(2022)10.2337/db22-0169

N/A

0.434DataRank · unranked

17 citations

Viji Nair, Yiyang Zhao, Dong‐Yuan Chang, Christine P. Limonte, Nisha Bansal +92 more

A model for network-based identification and pharmacological targeting of aberrant, replication-permissive transcriptional programs induced by viral infection

Communications Biology(2022)10.1038/s42003-022-03663-8

N/A

0.330DataRank · unranked

8 citations

Megan L. Stanifer, Gideon Bosker, Xiaoyun Sun, Sergio Triana, Patricio Doldan +11 more

A reference tissue atlas for the human kidney

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.23.216507

Top 55%

0.295DataRank

Top 55%5 citations

Rachel Sealfon, Rajasree Menon, Michael T. Eadon, Blue B. Lake, Becky Steck +37 more

mzPeak: Designing a Scalable, Interoperable, and Future-Ready Mass Spectrometry Data Format

Journal of Proteome Research(2025)10.1021/acs.jproteome.5c00435

N/A

0.241DataRank · unranked

4 citations

Theodore Alexandrov, Aivett Bilbao Pena, Wout Bittremieux, Federico Iván Brigante, Matthew Chambers +26 more

Spatial N-glycomics with MALDI-MSI for human kidney tissue v3

(2024)10.17504/protocols.io.8epv5j1m4l1b/v3

N/A

0.104DataRank · unranked

1 citations

Kumar Sharma, Theodore Alexandrov, Chris Anderton, Dušan Veličković

Role of endogenous adenine in kidney failure and mortality with diabetes

medRxiv(2023)10.1101/2023.05.31.23290681

N/A

0.104DataRank · unranked

1 citations

Guanshi Zhang, Jens Hansen, Petter Bjornstad, Hak Joo Lee, Rajasree Menon +36 more

13 C-SpaceM: Spatial single-cell isotope tracing reveals heterogeneity of de novo fatty acid synthesis in cancer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.18.553810

N/A

0DataRank · unranked

5 citations

Måns Ekelöf, Michaela Schwaiger-Haber, Lisa Schlicker, Martijn R. Molenaar, Shahraz Mohammed +8 more

DESI-MSI and METASPACE indicates lipid abnormalities and altered mitochondrial membrane components in diabetic renal proximal tubules

Metabolomics(2020)10.1007/s11306-020-1637-8

N/A

0DataRank · unranked

59 citations

Jialing Zhang, Rachel J. DeHoog, Subramaniam Pennathur, Christopher Anderton, Manjeri A. Venkatachalam +4 more

A call for accessible tools to unlock single-cell immunometabolism research

Nature Metabolism(2024)10.1038/s42255-024-01031-w

N/A

0DataRank · unranked

9 citations

Antoine Marçais, Felix J. Hartmann, Andreas Bergthaler, Ivan Zanoni, Mauro Corrado +11 more

Rapid Automated Annotation and Analysis of N-Glycan Mass Spectrometry Imaging Data Sets Using NGlycDB in METASPACE

Analytical Chemistry(2021)10.1021/acs.analchem.1c02347

N/A

0DataRank · unranked

24 citations

Tamara Bečejac, S. R. Mamedov, Kumar Sharma, Namasivayam Ambalavanan, Theodore Alexandrov +2 more

A Model for Network-Based Identification and Pharmacological Targeting of Aberrant, Replication-Permissive Transcriptional Programs Induced by Viral Infection

Research Square(2022)10.21203/rs.3.rs-1287631/v1

N/A

0DataRank · unranked

0 citations

Megan L. Stanifer, Gideon Bosker, Xiaoyun Sun, Sergio Triana, Patricio Doldan +11 more

Network-based identification and pharmacological targeting of host cell master regulators induced by SARS-CoV-2 infection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.03.451001

N/A

0DataRank · unranked

0 citations

Megan L. Stanifer, Gideon Bosker, Xiaoyun Sun, Sergio Triana, Patricio Doldan +11 more

Theodore Alexandrov

Indexed papers

Top data-sharing exemplar

Papers