🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Anindita Basu

University of Chicago

ORCID: 0000-0001-9468-3727
Biochemistry, Genetics and Molecular BiologyHealth ProfessionsEngineering

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
2.3Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A molecular atlas of the human postmenopausal fallopian tube and ovary from single-cell RNA and ATAC sequencing

Cell Reports(2022)10.1016/j.celrep.2022.111838
Top 14%
1.4DataRank
Top 14%73 citations

Yan Li, Melanie Weigert, Lisha Zhu, Heather Eckart, Melissa Javellana +11 more

Papers

Driven by 23 papers — median percentile 56. Top paper: “A molecular atlas of the human postmenopausal fallopian tube and ovary from single-cell RNA and ATAC sequencing”.

A molecular atlas of the human postmenopausal fallopian tube and ovary from single-cell RNA and ATAC sequencing

Cell Reports(2022)10.1016/j.celrep.2022.111838
Top 14%
1.4DataRank
Top 14%73 citations

Yan Li, Melanie Weigert, Lisha Zhu, Heather Eckart, Melissa Javellana +11 more

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

Cell(2015)10.1016/j.cell.2015.05.002
N/A
1.3DataRank · unranked
7753 citations

Anindita Basu, Rahul Satija, Taras K. Oleksyk, Karthik Shekhar, Melissa Goldman +12 more

Massively parallel single-nucleus RNA-seq with DroNc-seq

Nature Methods(2017)10.1038/nmeth.4407
N/A
1.1DataRank · unranked
1179 citations

Anindita Basu, Tyler Burks, Karthik Shekhar, Matan Hofree, François Aguet +9 more

A cell atlas of the human fallopian tube throughout the menstrual cycle and menopause

Nature Communications(2025)10.1038/s41467-024-55440-2
Top 34%
0.580DataRank
Top 34%22 citations

Yan Li, Lisha Zhu, Heather Eckart, Preety Bajwa, Rahul Krishnan +7 more

Engineered exosomes targeting MYC reverse the proneural-mesenchymal transition and extend survival of glioblastoma

Extracellular Vesicle(2022)10.1016/j.vesic.2022.100014
N/A
0.542DataRank · unranked
36 citations

Wafa E. Hassen, Janine Hensel, Jiha Kim, Hikaru Sugimoto, Bingrui Li +12 more

Bile acid fitness determinants of a Bacteroides fragilis isolate from a human pouchitis patient

mBio(2023)10.1128/mbio.02830-23
N/A
0.528DataRank · unranked
17 citations

Matthew K. Schnizlein, Selymar Pena-Rivera, Florian Trigodet, Abhishek Anil Dubey, Miette Hennessy +9 more

Multiomic analysis reveals cellular, transcriptomic and epigenetic changes in intestinal pouches of ulcerative colitis patients

Nature Communications(2025)10.1038/s41467-025-56212-2
N/A
0.373DataRank · unranked
11 citations

Ran Zhou, Bingqing Xie, Cambrian Y. Liu, Martin Kalski, Candace M. Cham +14 more

A molecular atlas of the human postmenopausal fallopian tube and ovary from single-cell RNA and ATAC sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.04.502826
Top 53%
0.318DataRank
Top 53%6 citations

Yan Li, Melanie Weigert, Lisha Zhu, Heather Eckart, Melissa Javellana +10 more

mDrop-seq: Massively parallel single-cell RNA-seq of Saccharomyces cerevisiae and Candida albicans

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.06.451338
N/A
0.269DataRank · unranked
5 citations

Bingqing Xie, Rebecca Back, Alan Selewa, Heather Eckart, Reeta P. Rao +2 more

Hedgehog signaling activates a mammalian heterochronic gene regulatory network controlling differentiation timing across lineages

Developmental Cell(2022)10.1016/j.devcel.2022.08.009
N/A
0DataRank · unranked
32 citations

Carlos Perez-Cervantes, Suzy S. J. Hur, Jessica Jacobs-Li, Emery Lu, Nikita Deng +20 more

Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation

Scientific Reports(2020)10.1038/s41598-020-58327-6
N/A
0DataRank · unranked
110 citations

Ryan Dohn, Heather Eckart, Stephanie Lozano, Bingqing Xie, Eric Gauchat +7 more

Single-cell genomics improves the discovery of risk variants and genes of Atrial Fibrillation

medRxiv(2022)10.1101/2022.02.02.22270312
N/A
0DataRank · unranked
2 citations

Kaixuan Luo, Michael Wasney, Linsin A. Smith, Xiaotong Sun, Chenwei Tang +6 more

High-throughput RNA sequencing of paraformaldehyde-fixed single cells

Nature Communications(2021)10.1038/s41467-021-25871-2
N/A
0DataRank · unranked
75 citations

Michiel van Gent, Nir Drayman, Anindita Basu, Michaela U. Gack, Savaş Tay +1 more

Single-cell genomics improves the discovery of risk variants and genes of atrial fibrillation

Nature Communications(2023)10.1038/s41467-023-40505-5
N/A
0DataRank · unranked
41 citations

Kaixuan Luo, Michael Wasney, Linsin A. Smith, Xiaotong Sun, Chenwei Tang +6 more

Integration of silicon chip microstructures for in-line microbial cell lysis in soft microfluidics

Lab on a Chip(2023)10.1039/d2lc00896c
N/A
0DataRank · unranked
6 citations

Allison Hohreiter, Emilio Rosas Linhard, Ryan Dohn, Suryakant Mishra, Abhiteja Konda +4 more

Multiomic analysis reveals cellular, transcriptomic and epigenetic changes in intestinal pouches of ulcerative colitis patients

medRxiv(2023)10.1101/2023.11.11.23298309
N/A
0DataRank · unranked
5 citations

Ran Zhou, Bingqing Xie, Cambrian Y. Liu, Martin Kalski, Candace M. Cham +14 more

Untangling the Role of Pathobionts from Bacteroides Species in Inflammatory Bowel Diseases

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.29.564605
N/A
0DataRank · unranked
0 citations

Joash Lake, Candace M. Cham, Mingming Zhu, Deepinder Kaur, Daina L. Ringus +17 more

A Cellular atlas of the human fallopian tube reveals the metamorphosis of secretory epithelial cells during the menstrual cycle and menopause

medRxiv(2023)10.1101/2023.11.22.23298470
Top 100%
0DataRank
Top 100%0 citations

Yi Li, Lixia Zhu, Heather Eckart, Prabhjot Singh Bajwa, Ranga Krishnan +7 more

DroNc-seq step-by-step v1

(2017)10.17504/protocols.io.md2c28e
N/A
0DataRank · unranked
0 citations

Naomi Habib, Prisca Liberali, Feng Zhang, Karthik Shekhar, Matan Hofree +10 more

Integration of silicon chip microstructures for in-line microbial cell lysis in soft microfluidics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.03.510547
N/A
0DataRank · unranked
0 citations

Allison Hohreiter, Emilio Rosas Linhard, Ryan Dohn, Suryakant Mishra, Abhiteja Konda +4 more

mDrop-Seq: Massively Parallel Single-Cell RNA-Seq of Saccharomyces cerevisiae and Candida albicans

Vaccines(2021)10.3390/vaccines10010030
N/A
0DataRank · unranked
23 citations

Bingqing Xie, Rebecca Back, Alan Selewa, Heather Eckart, Reeta P. Rao +2 more

Computational modeling of the cephalic arch predicts hemodynamic profiles in patients with brachiocephalic fistula access receiving hemodialysis

PLoS ONE(2021)10.1371/journal.pone.0254016
N/A
0DataRank · unranked
6 citations

Andrés Moya-Rodríguez, Cameron Bernstein, Sandeep Nathan, Rakesh Navuluri, Anindita Basu +1 more

Fixed single-cell RNA sequencing for understanding virus infection and host response

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.17.302232
N/A
0DataRank · unranked
6 citations

Michiel van Gent, Nir Drayman, Anindita Basu, Michaela U. Gack, Savaş Tay +1 more