Joseph Zaia

Biochemistry, Genetics and Molecular BiologyChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

3.7Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Proteomic and biological profiling of extracellular vesicles from Alzheimer's disease human brain tissues

Alzheimer s & Dementia(2020)10.1002/alz.12089

Top 6%

3.7DataRank

Top 6%196 citations

Annina M. DeLeo, Manveen K. Sethi, Kayo Takamatsu-Yukawa, Zijian Yang, Jina Ko +14 more

Papers

Driven by 43 papers — median percentile 94. Top paper: “Proteomic and biological profiling of extracellular vesicles from Alzheimer's disease human brain tissues”.

Proteomic and biological profiling of extracellular vesicles from Alzheimer's disease human brain tissues

Alzheimer s & Dementia(2020)10.1002/alz.12089

Top 6%

3.7DataRank

Top 6%196 citations

Annina M. DeLeo, Manveen K. Sethi, Kayo Takamatsu-Yukawa, Zijian Yang, Jina Ko +14 more

Focal clusters of peri-synaptic matrix contribute to activity-dependent plasticity and memory in mice

Cell Reports(2024)10.1016/j.celrep.2024.114112

N/A

0.617DataRank · unranked

18 citations

Hadi Mirzapourdelavar, Peter Durning, David Baidoe‐Ansah, Manveen K. Sethi, Sinead M. O’Donovan +11 more

In-Depth Matrisome and Glycoproteomic Analysis of Human Brain Glioblastoma Versus Control Tissue

Molecular & Cellular Proteomics(2022)10.1016/j.mcpro.2022.100216

N/A

0.598DataRank · unranked

53 citations

Margaret Downs, Shao Chun, William E. Hackett, Joanna J. Phillips, Joseph Zaia +1 more

Matrisome changes in Parkinson’s disease

Analytical and Bioanalytical Chemistry(2022)10.1007/s00216-022-03929-4

N/A

0.520DataRank · unranked

31 citations

Manveen K. Sethi, Rekha Raghunathan, Matthew D. Layne, Joseph Zaia, Margaret Downs

Progressive mechanical and structural changes in anterior cerebral arteries with Alzheimer’s disease

Alzheimer s Research & Therapy(2023)10.1186/s13195-023-01331-5

N/A

0.469DataRank · unranked

13 citations

Samuel Halvorsen, Nathan Blanke, Margaret Downs, Thor D. Stein, Irving J. Bigio +3 more

Influence of saccharide modifications on heparin lyase III substrate specificities

Glycobiology(2021)10.1093/glycob/cwab023

N/A

0.317DataRank · unranked

3 citations

Pradeep Chopra, Geert‐Jan Boons, Joseph Zaia, Jiandong Wu

Akt may associate with insulin‐responsive vesicles via interaction with sortilin

FEBS Letters(2023)10.1002/1873-3468.14790

N/A

0.279DataRank · unranked

5 citations

Anatoli B. Meriin, Maneet Singh, Raghuveera Kumar Goel, Joseph Zaia, Konstantin V. Kandror +1 more

Serial in-solution digestion protocol for mass spectrometry-based glycomics and proteomics analysis

Molecular Omics(2020)10.1039/d0mo00019a

N/A

0DataRank · unranked

31 citations

Margaret Downs, Joseph Zaia, Manveen K. Sethi

Glycosylation of Serum Clusterin in Wild-Type Transthyretin-Associated (ATTRwt) Amyloidosis: A Study of Disease-Associated Compositional Features Using Mass Spectrometry Analyses

Biochemistry(2020)10.1021/acs.biochem.0c00590

N/A

0DataRank · unranked

6 citations

Deborah Chang, William E. Hackett, Joseph Zaia, Lawreen H. Connors, Celia Torres-Arancivia

A Computational Framework for Heparan Sulfate Sequencing Using High-resolution Tandem Mass Spectra

UNC Libraries(2020)10.17615/125v-jm93

N/A

0DataRank · unranked

1 citations

Huang Yu, Geert‐Jan Boons, Han Hu, Jian Liu, Chengli Zong +6 more

Assignment of coronavirus spike protein site-specific glycosylation using GlycReSoft

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.31.125302

N/A

0DataRank · unranked

10 citations

Joseph Zaia, Joshua Klein

Measuring site-specific glycosylation similarity between influenza A virus variants with statistical certainty

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.13.991380

N/A

0DataRank · unranked

2 citations

William E. Hackett, Lei Zhong, Xiu‐Feng Wan, Joseph Zaia, Deborah Chang

Protocol for analysis of glycoproteomics LC-MS data using GlycReSoft

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.22.108928

N/A

0DataRank · unranked

2 citations

Joseph Zaia, Joshua Klein

Community evaluation of glycoproteomics informatics solutions reveals high-performance search strategies for serum glycopeptide analysis

Nature Methods(2021)10.1038/s41592-021-01309-x

N/A

0DataRank · unranked

148 citations

Anastasia Chernykh, Kathirvel Alagesan, Marshall Bern, Weiqian Cao, Robert J. Chalkley +49 more

The 3- O -sulfation of heparan sulfate modulates protein binding and lyase degradation

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2012935118

N/A

0DataRank · unranked

76 citations

Apoorva Joshi, Jiandong Wu, Weigang Lü, Tejabhiram Yadavalli, Margreet A. Wolfert +4 more

Expression of the Extracellular Sulfatase SULF2 Affects Survival of Head and Neck Squamous Cell Carcinoma Patients

Frontiers in Oncology(2021)10.3389/fonc.2020.582827

N/A

0DataRank · unranked

23 citations

Jaeil Ahn, Rekha Raghunathan, Bhaskar Kallakury, Bruce J. Davidson, Zuzana Brnakova Kennedy +3 more

Data-independent acquisition mass spectrometry for site-specific glycoproteomics characterization of SARS-CoV-2 spike protein

Analytical and Bioanalytical Chemistry(2021)10.1007/s00216-021-03643-7

N/A

0DataRank · unranked

23 citations

Joshua Klein, Mary Rachel Nalehua, William E. Hackett, Joseph Zaia, Deborah Chang

Glycoproteomic Sample Processing, LC‐MS, and Data Analysis Using GlycReSoft

Current Protocols(2021)10.1002/cpz1.84

N/A

0DataRank · unranked

14 citations

Asif Shajahan, Lauren E. Pepi, Parastoo Azadi, Joseph Zaia, Meizhe Wang

GAGrank: Software for Glycosaminoglycan Sequence Ranking Using a Bipartite Graph Model

Molecular & Cellular Proteomics(2021)10.1016/j.mcpro.2021.100093

N/A

0DataRank · unranked

4 citations

Jiandong Wu, Joshua Klein, Cheng Lin, Luís Carvalho, Joseph Zaia +1 more

O-Glycoproteomic analysis of engineered heavily glycosylated fusion proteins using nanoHILIC-MS

Analytical and Bioanalytical Chemistry(2022)10.1007/s00216-022-04318-7

N/A

0DataRank · unranked

8 citations

Yan Wang, Charles C. Nwosu, Sheng Gu, M. Muthuraman, Joseph Zaia +1 more

Improving Statistical Certainty of Glycosylation Similarity between Influenza A Virus Variants Using Data-Independent Acquisition Mass Spectrometry

Molecular & Cellular Proteomics(2022)10.1016/j.mcpro.2022.100412

N/A

0DataRank · unranked

6 citations

Joshua Klein, William E. Hackett, Mary Rachel Nalehua, Xiu‐Feng Wan, Joseph Zaia +1 more

Glycoproteomic Analyses of Influenza A Viruses Using timsTOF Pro MS

Journal of Proteome Research(2022)10.1021/acs.jproteome.2c00469

N/A

0DataRank · unranked

6 citations

Brian Mooney, Gustavo J. Cavallero, Minhui Guan, Lei Li, Joseph Zaia +2 more

De Novo Glycan Sequencing by Electronic Excitation Dissociation MS2-Guided MS3 Analysis on an Omnitrap-Orbitrap Hybrid Instrument

ChemRxiv(2022)10.26434/chemrxiv-2022-f8n3b

N/A

0DataRank · unranked

0 citations

Dimitris Papanastasiou, Mariagela Kosmopoulou, Thanos Smyrnakis, Pengyu Hong, Nafisa Tursumamat +7 more

De novo glycan sequencing by electronic excitation dissociation MS 2 -guided MS 3 analysis on an Omnitrap-Orbitrap hybrid instrument

Chemical Science(2023)10.1039/d3sc00870c

N/A

0DataRank · unranked

19 citations

Dimitris Papanastasiou, Mariangela Kosmopoulou, Athanasios Smyrnakis, Pengyu Hong, Nafisa Tursumamat +7 more

Analysis of complex proteoglycans using serial proteolysis and EThcD provides deep N- and O-glycoproteomic coverage

Analytical and Bioanalytical Chemistry(2023)10.1007/s00216-023-04934-x

N/A

0DataRank · unranked

12 citations

Jillian Curran, Joseph Zaia, Manveen K. Sethi, Margaret Downs

De Novo Glycan Sequencing by Electronic Excitation Dissociation MS2-Guided MS3 Analysis on an Omnitrap-Orbitrap Hybrid Instrument

ChemRxiv(2023)10.26434/chemrxiv-2022-f8n3b-v2

N/A

0DataRank · unranked

0 citations

Dimitris Papanastasiou, Mariangela Kosmopoulou, Athanasios Smyrnakis, Pengyu Hong, Nafisa Tursumamat +7 more

RAMZIS: a bioinformatic toolkit for rigorous assessment of the alterations to glycoprotein structure that occur during biological processes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.30.542895

N/A

0DataRank · unranked

0 citations

Deborah Chang, Luís Carvalho, Joseph Zaia, William E. Hackett

Direct and Detailed Site-Specific Glycopeptide Characterization by Higher-Energy Electron-Activated Dissociation Tandem Mass Spectrometry

Analytical Chemistry(2024)10.1021/acs.analchem.3c04484

N/A

0DataRank · unranked

20 citations

Chaoshuang Xia, Shuye Wu, Margaret Downs, Haowei Tong, Nafisa Tursumamat +5 more

Expanding N-glycopeptide identifications by modeling fragmentation, elution, and glycome connectivity

Nature Communications(2024)10.1038/s41467-024-50338-5

N/A

0DataRank · unranked

17 citations

Luís Carvalho, Joseph Zaia, Joshua Klein

Accurate Collisional Cross Section Measurement by Multipass Cyclic Ion Mobility Spectrometry

Analytical Chemistry(2024)10.1021/acs.analchem.4c01758

N/A

0DataRank · unranked

15 citations

Elias Mernie, Joseph Zaia, Catherine E. Costello, Cheng Lin, Chaoshuang Xia

Comprehensive Glycomic and Proteomic Analysis of Mouse Striatum and Lateral Hypothalamus Following Repeated Exposures to Cocaine or Methamphetamine

Molecular & Cellular Proteomics(2024)10.1016/j.mcpro.2024.100803

N/A

0DataRank · unranked

6 citations

Riccardo Maccioni, John D. Hogan, Tomoya Kawamura, Vez Repunte‐Canonigo, Jihuan Chen +3 more

A critical evaluation of ultrasensitive single-cell proteomics strategies

Analytical and Bioanalytical Chemistry(2024)10.1007/s00216-024-05171-6

N/A

0DataRank · unranked

10 citations

Joseph Zaia, Mary Rachel Nalehua

RAMZIS: a bioinformatic toolkit for rigorous assessment of the alterations to glycoprotein composition that occur during biological processes

Bioinformatics Advances(2024)10.1093/bioadv/vbae012

N/A

0DataRank · unranked

1 citations

Deborah Chang, Luís Carvalho, Joseph Zaia, William E. Hackett

Mass Spectrometry–Based Glycomics and Proteomics Profiling of On-Slide Digested Tissue from Complex Biological Samples

Methods in molecular biology(2024)10.1007/978-1-0716-4298-6_18

N/A

0DataRank · unranked

1 citations

Joseph Zaia, Manveen K. Sethi, Sayantani Chatterjee

Accurate Collisional Cross Section Measurement by Multi-pass Cyclic Ion Mobility Spectrometry

ChemRxiv(2024)10.26434/chemrxiv-2024-3rdv1

N/A

0DataRank · unranked

1 citations

Elias Mernie, Joseph Zaia, Catherine E. Costello, Cheng Lin, Chaoshuang Xia

Traffic Jam activates the Flamenco piRNA cluster locus and the Piwi pathway to ensure transposon silencing and Drosophila fertility

Cell Reports(2025)10.1016/j.celrep.2025.115354

N/A

0DataRank · unranked

8 citations

J. Lee, Shruti Gupta, Linda Yang, Raghuveera Kumar Goel, Joseph Zaia +2 more

Overview of Proteomic Analysis of Amyloid Plaques and Neurofibrillary Tangles in Alzheimer’s Disease

Biomolecules(2025)10.3390/biom15091310

N/A

0DataRank · unranked

5 citations

Simran Raikundalia, Joseph Zaia, Manveen K. Sethi, Amber Grewal

A glycomics and proteomics study of aging and Parkinson’s disease in human brain

Scientific Reports(2020)10.1038/s41598-020-69480-3

N/A

0DataRank · unranked

65 citations

John D. Hogan, Adam Labadorf, Richard H. Myers, Joseph Zaia, Rekha Raghunathan

Complexity and ultrastructure of infectious extracellular vesicles from cells infected by non-enveloped virus

Scientific Reports(2020)10.1038/s41598-020-64531-1

N/A

0DataRank · unranked

49 citations

Evan Rossignol, Deborah Chang, Joseph Zaia, Isaac Forrester, Kiran Raja +5 more

Measuring Site-specific Glycosylation Similarity between Influenza a Virus Variants with Statistical Certainty

Molecular & Cellular Proteomics(2020)10.1074/mcp.ra120.002031

N/A

0DataRank · unranked

21 citations

William E. Hackett, Lei Zhong, Xiu‐Feng Wan, Joseph Zaia, Deborah Chang

Multi-task learning sparse group lasso: a method for quantifying antigenicity of influenza A(H1N1) virus using mutations and variations in glycosylation of Hemagglutinin

BMC Bioinformatics(2020)10.1186/s12859-020-3527-5

N/A

0DataRank · unranked

18 citations

Deborah Chang, Lei Han, Xiaojian Zhang, Joseph Zaia, Xiu‐Feng Wan +1 more

Calculating Glycoprotein Similarities From Mass Spectrometric Data

Molecular & Cellular Proteomics(2020)10.1074/mcp.r120.002223

N/A

0DataRank · unranked

12 citations

Joseph Zaia, William E. Hackett

Relative Retention Time Estimation Improves N-Glycopeptide Identifications by LC–MS/MS

Journal of Proteome Research(2020)10.1021/acs.jproteome.0c00051

N/A

0DataRank · unranked

38 citations

Joseph Zaia, Joshua Klein

Joseph Zaia

Indexed papers

Top data-sharing exemplar

Papers