🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jean‐Philippe Vert

Faculty of 1000 (United States)

ORCID: 0000-0001-9510-8441

Also affiliated with International Office for Water

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile
0.165Author DataRank

Indexed papers

1in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Multicondition and multimodal temporal profile inference during mouse embryonic development

Genome Research(2025)10.1101/gr.279997.124
Top 70%
0.165DataRank
Top 70%2 citations

Chengxiang Qiu, Galina N. Filippova, Gang Li, Jay Shendure, Jean‐Philippe Vert +4 more

Papers

Driven by 7 papers — median percentile 30. Top paper: “Multicondition and multimodal temporal profile inference during mouse embryonic development”.

Multicondition and multimodal temporal profile inference during mouse embryonic development

Genome Research(2025)10.1101/gr.279997.124
Top 70%
0.165DataRank
Top 70%2 citations

Chengxiang Qiu, Galina N. Filippova, Gang Li, Jay Shendure, Jean‐Philippe Vert +4 more

Inference of genome 3D architecture by modeling overdispersion of Hi-C data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.04.429864
N/A
0DataRank · unranked
4 citations

William Stafford Noble, Jean‐Philippe Vert, Nelle Varoquaux

Inference of 3D genome architecture by modeling overdispersion of Hi-C data

Bioinformatics(2023)10.1093/bioinformatics/btac838
N/A
0DataRank · unranked
16 citations

William Stafford Noble, Jean‐Philippe Vert, Nelle Varoquaux

Measuring significant changes in chromatin conformation with ACCOST

Nucleic Acids Research(2020)10.1093/nar/gkaa069
N/A
0DataRank · unranked
29 citations

Borislav H. Hristov, Karine G. Le Roch, Jean‐Philippe Vert, William Stafford Noble, Kate B. Cook

Pseudotime analysis for time-series single-cell sequencing and imaging data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.03.565575
N/A
0DataRank · unranked
0 citations

Hyeonjin Kim, Sriram Pendyala, Ran Zhang, Christine M. Distèche, Jean‐Philippe Vert +4 more

Sceptic: pseudotime analysis for time-series single-cell sequencing and imaging data

Genome biology(2025)10.1186/s13059-025-03679-3
N/A
0DataRank · unranked
5 citations

Hyeonjin Kim, Sriram Pendyala, Ran Zhang, Jean‐Philippe Vert, Christine M. Distèche +4 more

LSMMD-MA: scaling multimodal data integration for single-cell genomics data analysis

Bioinformatics(2023)10.1093/bioinformatics/btad420
N/A
0DataRank · unranked
3 citations

Ran Zhang, Gang Li, Marco Cuturi, William Stafford Noble, Jean‐Philippe Vert +1 more