Makedonka Mitreva

Also affiliated with Washington University in St. Louis

Immunology and MicrobiologyEnvironmental ScienceVeterinaryMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

51.2Author DataRank

Indexed papers

8in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 8 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A global reference for human genetic variation

Nature(2015)10.1038/nature15393

Top 1%

10.6DataRank

Top 1%20166 citations

Gonçalo R. Abecasis, Richard M. Durbin, Panagiotis Deloukas, Aravinda Chakravarti, Peter Donnelly +516 more

Papers

Driven by 62 papers — median percentile 98. Top paper: “A global reference for human genetic variation”.

A global reference for human genetic variation

Nature(2015)10.1038/nature15393

Top 1%

10.6DataRank

Top 1%20166 citations

Gonçalo R. Abecasis, Richard M. Durbin, Panagiotis Deloukas, Aravinda Chakravarti, Peter Donnelly +516 more

A map of human genome variation from population-scale sequencing

Nature(2010)10.1038/nature09534

Top 2%

9.1DataRank

Top 2%8109 citations

Min Hu, Yuan Chen, Matthew N. Bainbridge, Richard M. Durbin, Si Quang Le +319 more

A framework for human microbiome research

Nature(2012)10.1038/nature11209

Top 2%

8.4DataRank

Top 2%2766 citations

Barbara A. Methé, William Nelson, Mihai Pop, Heather H. Creasy, Michelle Giglio +236 more

Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel

Nature Communications(2014)10.1038/ncomms4934

Top 2%

8.3DataRank

Top 2%460 citations

Jonathan Marchini, Peter Donnelly, Gerton Lunter, Jonathan L. Marchini, Simon Myers +364 more

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

Cell(2018)10.1016/j.cell.2018.02.052

Top 2%

8.1DataRank

Top 2%3980 citations

Katherine A. Hoadley, Laila M. Poisson, Alexander J. Lazar, Andrew D. Cherniack, Albert J. Kovatich +866 more

Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics

Cell(2018)10.1016/j.cell.2018.03.033

Top 3%

6.4DataRank

Top 3%447 citations

Matthew H. Bailey, Hoifung Poon, Vesteinn Thorsson, Antonio Colaprico, Andreas Bender +883 more

Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas

Cell Reports(2018)10.1016/j.celrep.2018.03.046

N/A

5.5DataRank · unranked

186 citations

Francisco Sanchez-Vega, Konnor C. La, Joshua Armenia, Walid K. Chatila, Augustin Luna +869 more

Erratum: Genome analysis of the platypus reveals unique signatures of evolution

Nature(2008)10.1038/nature07253

N/A

1.6DataRank · unranked

35 citations

LaDeana W. Hillier, Jennifer A. Marshall Graves, Kerstin Lindblad‐Toh, Elaine A. Ostrander, Frank Grützner +115 more

Structure, function and diversity of the healthy human microbiome

Nature(2012)10.1038/nature11234

N/A

1.4DataRank · unranked

10088 citations

Curtis Huttenhower, Dirk Gevers, Rob Knight, Sahar Abubucker, Jonathan H. Badger +235 more

Oncogenic Signaling Pathways in The Cancer Genome Atlas

Cell(2018)10.1016/j.cell.2018.03.035

N/A

1.2DataRank · unranked

3322 citations

Marco Mina, Joshua Armenia, Walid K. Chatila, Augustin Luna, Konnor C. La +891 more

Enterotoxigenic Escherichia coli heat-labile toxin drives enteropathic changes in small intestinal epithelia

Nature Communications(2022)10.1038/s41467-022-34687-7

N/A

1.2DataRank · unranked

53 citations

Brunda Tumala, Tim J. Vickers, John Martin, Bruce A. Rosa, Subrata Sabui +10 more

Temporal development of the gut microbiome in early childhood from the TEDDY study

Nature(2018)10.1038/s41586-018-0617-x

N/A

1.1DataRank · unranked

2041 citations

Nadim J. Ajami, Jacqueline L. O’Brien, Diane S. Hutchinson, Daniel P. Smith, Matthew C. Wong +28 more

Patterns and rates of exonic de novo mutations in autism spectrum disorders

Nature(2012)10.1038/nature11011

N/A

1.1DataRank · unranked

1794 citations

Yan Kou, Li Liu, Avi Ma’ayan, Kaitlin E. Samocha, Aniko Sabo +60 more

The Genetic Basis of Mendelian Phenotypes: Discoveries, Challenges, and Opportunities

The American Journal of Human Genetics(2015)10.1016/j.ajhg.2015.06.009

N/A

0.980DataRank · unranked

687 citations

Kati J. Buckingham, Shalini N. Jhangiani, Corinne Boehm, Nara Sobreira, Joshua D. Smith +46 more

Altered larval activation response associated with multidrug resistance in the canine hookworm Ancylostoma caninum

Parasitology(2024)10.1017/s0031182023001385

N/A

0.700DataRank · unranked

20 citations

Emilia Grill, Young‐Jun Choi, Makedonka Mitreva, Damien M. O’Halloran, John M. Hawdon +1 more

The endosymbiont Wolbachia rebounds following antibiotic treatment

PLoS Pathogens(2020)10.1371/journal.ppat.1008623

N/A

0.494DataRank · unranked

26 citations

Ian Vogel, Laura Chappell, Christina A. Bulman, K. C. Lim, Mona Luo +11 more

An Integrated Approach to Identify New Anti-Filarial Leads to Treat River Blindness, a Neglected Tropical Disease

Pathogens(2021)10.3390/pathogens10010071

N/A

0.464DataRank · unranked

21 citations

Christina A. Bulman, Fidelis Cho‐Ngwa, Chelsea Fischer, Chris Marcellino, Michelle R. Arkin +10 more

Poly(ADP-ribose) polymerase 9 mediates early protection against Mycobacterium tuberculosis infection by regulating type I IFN production

Journal of Clinical Investigation(2023)10.1172/jci158630

N/A

0.457DataRank · unranked

20 citations

Mushtaq Ahmed, Bruce A. Rosa, Mark Boothby, Sung Hoon Cho, Javier Rangel‐Moreno +9 more

Interleukin-1 receptor antagonist is a conserved early factor for exacerbating tuberculosis susceptibility

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.27.564420

N/A

0.360DataRank · unranked

10 citations

Daisy X. Ji, Bruce A. Rosa, David L. Jaye, Sara Suliman, Makedonka Mitreva +4 more

Parasite OMICS, the grand challenges ahead

Frontiers in Parasitology(2022)10.3389/fpara.2022.995302

N/A

0.330DataRank · unranked

8 citations

Makedonka Mitreva

Nuclear Factor κB Signaling Deficiency in CD11c-Expressing Phagocytes Mediates Early Inflammatory Responses and Enhances Mycobacterium tuberculosis Control

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae060

N/A

0.269DataRank · unranked

5 citations

Micah Dunlap, Sadia Akter, Ananya Gupta, Mushtaq Ahmed, Bruce A. Rosa +4 more

Author Correction: Responses to acute infection with SARS-CoV-2 in the lungs of rhesus macaques, baboons and marmosets

Nature Microbiology(2021)10.1038/s41564-021-00867-2

N/A

0.269DataRank · unranked

5 citations

Bindu Singh, Shashank Ganatra, Michal Gaži, Journey Cole, Rajesh Thippeshappa +57 more

Antifungal and Antiparasitic Activity of Novel Metallocene-containing Fluconazole Derivatives

ChemRxiv(2023)10.26434/chemrxiv-2023-cp31b

N/A

0.208DataRank · unranked

3 citations

Gonzalo Scalese, Christina A. Bulman, Robin Vinck, Olivier Blacque, Margot Paulino +10 more

Author Correction: Comparative and demographic analysis of orang-utan genomes

Nature(2022)10.1038/s41586-022-04799-7

Top 67%

0.174DataRank

Top 67%2 citations

LaDeana W. Hillier, Wesley C. Warren, Kim C. Worley, Lynne V. Nazareth, Donna M. Muzny +95 more

Single-cell transcriptome atlas of adult male and female human hookworm Ancylostoma ceylanicum

iScience(2025)10.1016/j.isci.2025.113846

Top 67%

0.167DataRank

Top 67%2 citations

Bruce A. Rosa, John Martin, Makedonka Mitreva, Suman Bharti

Transcriptional responses of mouse proximal colon and colonoids during early whipworm infection

mBio(2025)10.1128/mbio.02176-25

N/A

0.165DataRank · unranked

2 citations

Joseph F. Urban, Bruce A. Rosa, Makedonka Mitreva, Hyeim Jung

Genetic structuring and estimation of reproductive adults in Onchocerca volvulus: A genome-wide analysis across hosts and regions

PLoS neglected tropical diseases(2025)10.1371/journal.pntd.0013221

N/A

0.165DataRank · unranked

2 citations

Young‐Jun Choi, Kerstin Fischer, Shannon M. Hedtke, Anusha Kode, Nicholas Opoku +8 more

The identification of small molecule inhibitors with anthelmintic activities that target conserved proteins among ruminant gastrointestinal nematodes

mBio(2024)10.1128/mbio.00095-24

N/A

0DataRank · unranked

2 citations

Dante S. Zarlenga, John Martin, Peter Geldhof, Kymberlie Hallsworth-Pepin, Makedonka Mitreva +1 more

Spatial proteomics of Onchocerca volvulus with pleomorphic neoplasms shows local and systemic dysregulation of protein expression

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.15.618383

N/A

0DataRank · unranked

1 citations

Peter Fischer, Bruce A. Rosa, D. A. Yates, B. Cho, Jessica Lukowski +7 more

Independent origins and non-parallel selection signatures of triclabendazole resistance in Fasciola hepatica

Nature Communications(2025)10.1038/s41467-025-57796-5

N/A

0DataRank · unranked

11 citations

Bruce A. Rosa, Martha V. Fernández-Baca, Rodrigo A. Ore, John Martin, Pedro Ortiz +4 more

Macrophage-T cell interactions promote SLAMF1 expression for enhanced TB defense

Nature Communications(2025)10.1038/s41467-025-61826-7

N/A

0DataRank · unranked

9 citations

Steven J. Grigsby, Gideon Erkenswick, Cynthia Portal‐Celhay, Ekansh Mittal, Guozhe Yang +10 more

An Antibody Biomarker Associated with Onchocerca volvulus Microfilariae Identified by Proteomic Analysis of Parasite Tissues Isolated from Paraffin Embedded O. volvulus Nodules by Laser Capture Microdissection

American Journal of Tropical Medicine and Hygiene(2025)10.4269/ajtmh.24-0793

N/A

0DataRank · unranked

3 citations

Kerstin Fischer, Lucía Sánchez Di Maggio, Bruce A. Rosa, Yuefang Huang, Irina Diekmann +8 more

Proteomic characterization and comparison of the infective and adult life stage secretomes from Necator americanus and Ancylostoma ceylanicum

PLoS neglected tropical diseases(2025)10.1371/journal.pntd.0012780

N/A

0DataRank · unranked

6 citations

Bruce A. Rosa, Luke Becker, Mali Camberis, Graham Le Gros, Bin Zhan +12 more

Prolonged dysregulation of gene expression and biomarkers of coagulation, fibrinolysis, and endothelium in pediatric central nervous system malaria

BMC Infectious Diseases(2025)10.1186/s12879-025-11957-5

N/A

0DataRank · unranked

2 citations

Bruce A. Rosa, Katherine R. Dobbs, Sidney Ogolla, David Midem, Paula Embury +8 more

Mitochondrial genome analysis supports zoonotic transmission of triclabendazole-resistant human fascioliasis in Peru

One Health(2025)10.1016/j.onehlt.2025.101268

N/A

0DataRank · unranked

1 citations

Young‐Jun Choi, Martha V Fernandez-Baca, Rodrigo A. Ore, Maria Luisa Morales, Pedro Ortiz +4 more

ETEC heat-labile toxin promotes β-catenin stabilization and transcriptional reprogramming to disrupt intestinal epithelial differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.02.680135

N/A

0DataRank · unranked

0 citations

Bipul Setu, Nikhilesh Joardar, John Martin, Bruce A. Rosa, Makedonka Mitreva +2 more

cellSTAAR: incorporating single-cell-sequencing-based functional data to boost power in rare variant association testing of noncoding regions

Nature Methods(2025)10.1038/s41592-025-02919-5

N/A

0DataRank · unranked

0 citations

Yi Zhang, Xihao Li, Margaret Sunitha Selvaraj, Zilin Li, Hufeng Zhou +544 more

Responses to acute infection with SARS-CoV-2 in the lungs of rhesus macaques, baboons and marmosets

Nature Microbiology(2020)10.1038/s41564-020-00841-4

N/A

0DataRank · unranked

210 citations

Bindu Singh, Shashank Ganatra, Michal Gaži, Journey Cole, Rajesh Thippeshappa +57 more

Immune correlates of tuberculosis disease and risk translate across species

Science Translational Medicine(2020)10.1126/scitranslmed.aay0233

N/A

0DataRank · unranked

99 citations

Shyamala Thirunavukkarasu, Bruce A. Rosa, Kimberly A. Thomas, Shibali Das, Javier Rangel‐Moreno +13 more

Comprehensive analysis of the secreted proteome of adult Necator americanus hookworms

PLoS neglected tropical diseases(2020)10.1371/journal.pntd.0008237

N/A

0DataRank · unranked

55 citations

Mark S. Pearson, Srikanth S. Manda, Young-Jun Choi, Matthew A. Field, Ramon M. Eichenberger +11 more

Transcriptomic analysis of hookworm Ancylostoma ceylanicum life cycle stages reveals changes in G-protein coupled receptor diversity associated with the onset of parasitism

International Journal for Parasitology(2020)10.1016/j.ijpara.2020.05.003

N/A

0DataRank · unranked

16 citations

Gabriella Rudy, Patti Erickson, Ramesh Ratnappan, Meseret T. Haile, Bruce A. Rosa +4 more

Rapid determination of nematode cell and organ susceptibility to toxic treatments

International Journal for Parasitology Drugs and Drug Resistance(2020)10.1016/j.ijpddr.2020.10.007

N/A

0DataRank · unranked

11 citations

Bruce A. Rosa, Rahul Tyagi, Makedonka Mitreva, Douglas P. Jasmer

Comparative genomics and transcriptomics of 4 Paragonimus species provide insights into lung fluke parasitism and pathogenesis

GigaScience(2020)10.1093/gigascience/giaa073

N/A

0DataRank · unranked

29 citations

Young-Jun Choi, Samantha N. McNulty, Hyeim Jung, John Martin, Takeshi Agatsuma +9 more

IFN signaling and neutrophil degranulation transcriptional signatures are induced during SARS-CoV-2 infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.06.239798

N/A

0DataRank · unranked

25 citations

Mushtaq Ahmed, Dhiraj Kumar Singh, José Alberto Choreño-Parra, Journey Cole, Luis Jiménez-Álvarez +11 more

Extrasynaptic volume transmission: A novel route for neuropeptide signaling in nematodes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.07.240440

N/A

0DataRank · unranked

1 citations

Yang Liu, Fiona M. McKay, Elke Vandewyer, Charles Viau, Allister Irvine +9 more

The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia

Digital Commons@Becker (Washington University School of Medicine)(2020)10.17615/e5gj-a863

N/A

0DataRank · unranked

0 citations

Christina A. Cuomo, William E. Goldman, Sharvari Gujja, Christopher A. Desjardins, Sarah Young +21 more

IFN signaling and neutrophil degranulation transcriptional signatures are induced during SARS-CoV-2 infection

Communications Biology(2021)10.1038/s42003-021-01829-4

N/A

0DataRank · unranked

109 citations

Mushtaq Ahmed, Dhiraj Kumar Singh, José Alberto Choreño-Parra, Journey Cole, Luis Jiménez-Álvarez +11 more

Ascaris suum Informs Extrasynaptic Volume Transmission in Nematodes

ACS Chemical Neuroscience(2021)10.1021/acschemneuro.1c00281

N/A

0DataRank · unranked

28 citations

Yang Liu, Fiona M. McKay, Elke Vandewyer, Charles Viau, Allister Irvine +10 more

Phylum-Spanning Neuropeptide GPCR Identification and Prioritization: Shaping Drug Target Discovery Pipelines for Nematode Parasite Control

Frontiers in Endocrinology(2021)10.3389/fendo.2021.718363

N/A

0DataRank · unranked

22 citations

Ciaran J. McCoy, Bethany A. Crooks, Fiona M. McKay, Paul McVeigh, Darrin Mckenzie +8 more

Lung Epithelial Signaling Mediates Early Vaccine-Induced CD4 + T Cell Activation and Mycobacterium tuberculosis Control

mBio(2021)10.1128/mbio.01468-21

N/A

0DataRank · unranked

19 citations

Nancy D. Marín, Ekaterina Esaulova, Mushtaq Ahmed, Amanda Swain, Bruce A. Rosa +9 more

Lung epithelial signaling mediates early vaccine-induced CD4 + T cell activation and Mtb control

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.03.446981

N/A

0DataRank · unranked

1 citations

Nancy D. Marín, Ekaterina Esaulova, Mushtaq Ahmed, Amanda Swain, Bruce A. Rosa +9 more

Characterization of a novel microfilarial antigen for diagnosis of Wuchereria bancrofti infections

PLoS neglected tropical diseases(2022)10.1371/journal.pntd.0010407

N/A

0DataRank · unranked

12 citations

Kerstin Fischer, Young‐Jun Choi, Kurt C. Curtis, Philip J. Budge, Makedonka Mitreva +4 more

Horizontal gene transfer provides insights into the deep evolutionary history and biology of Trichinella

Food and Waterborne Parasitology(2022)10.1016/j.fawpar.2022.e00155

N/A

0DataRank · unranked

3 citations

Peter C. Thompson, Makedonka Mitreva, Bruce A. Rosa, Eric P. Hoberg, Dante S. Zarlenga

Enterotoxigenic Escherichia coli heat-labile toxin drives enteropathic changes in small intestinal epithelia

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.24.504189

N/A

0DataRank · unranked

0 citations

Brunda Tumala, Tim J. Vickers, John Martin, Bruce A. Rosa, Subrata Sabui +10 more

Antigen-specific B cells direct T follicular-like helper cells into lymphoid follicles to mediate Mycobacterium tuberculosis control

Nature Immunology(2023)10.1038/s41590-023-01476-3

N/A

0DataRank · unranked

95 citations

Ananya Gupta, Taylor W. Foreman, Lan Lu, José Alberto Choreño-Parra, Stanley Kimbung Mbandi +17 more

Discovery of New Broad-Spectrum Anti-Infectives for Eukaryotic Pathogens Using Bioorganometallic Chemistry

Journal of Medicinal Chemistry(2023)10.1021/acs.jmedchem.3c01333

N/A

0DataRank · unranked

8 citations

Hyeim Jung, Christina A. Bulman, James Ng, Robin Vinck, Cillian O’Beirne +16 more

Identification of biomarker candidates for filarial parasite infections by analysis of extracellular vesicles

Frontiers in Parasitology(2023)10.3389/fpara.2023.1281092

N/A

0DataRank · unranked

5 citations

Lucía Sánchez Di Maggio, Bruce A. Rosa, Robert W. Sprung, Petra Erdmann-Gilmore, R. Reid Townsend +6 more

Identification of broadly-conserved parasitic nematode proteins that activate immunity

Frontiers in Parasitology(2023)10.3389/fpara.2023.1223942

N/A

0DataRank · unranked

1 citations

Dante S. Zarlenga, Valsin Fournet, Ethiopia Beshah, Dolores E. Hill, Alexander Zarlenga +7 more

Discovery of New Broad-Spectrum Anti-Infectives for Eukaryotic Pathogens Using Bioorganometallic Chemistry

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.28.546819

N/A

0DataRank · unranked

1 citations

Hyeim Jung, Christina A. Bulman, James Ng, Robin Vinck, Cillian O’Beirne +15 more

Distinguishing recrudescence from reinfection in lymphatic filariasis: a genomics-based approach for monitoring worm burden

medRxiv(2023)10.1101/2023.11.05.23297155

N/A

0DataRank · unranked

0 citations

Kerstin Fischer, Aboulaye Meïté, Benjamin G. Koudou, Peter Fischer, Makedonka Mitreva +1 more

Antifungal and Antiparasitic Activities of Metallocene-Containing Fluconazole Derivatives

ACS Infectious Diseases(2024)10.1021/acsinfecdis.3c00577

N/A

0DataRank · unranked

17 citations

Gonzalo Scalese, Christina A. Bulman, Robin Vinck, Olivier Blacque, Margot Paulino +10 more

Distinguishing recrudescence from reinfection in lymphatic filariasis

EBioMedicine(2024)10.1016/j.ebiom.2024.105188

N/A

0DataRank · unranked

10 citations

Kerstin Fischer, Aboulaye Meïté, Benjamin G. Koudou, Peter Fischer, Makedonka Mitreva +1 more

Makedonka Mitreva

Indexed papers

Top data-sharing exemplar

Papers