Xiaojiang S. Chen

Also affiliated with Heliophysics

Biochemistry, Genetics and Molecular BiologyImmunology and MicrobiologyMedicineEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 29 papers. Top paper: “Structural basis for a Polθ helicase small-molecule inhibitor revealed by cryo-EM”.

Structural basis for a Polθ helicase small-molecule inhibitor revealed by cryo-EM

Nature Communications(2024)10.1038/s41467-024-51351-4

N/A

0.530DataRank · unranked

15 citations

Ziyuan Li, Leonid Minakhin, Gurushankar Chandramouly, Mrityunjay Tyagi, Robert Betsch +9 more

Molecular mechanism for regulating APOBEC3G DNA editing function by the non-catalytic domain

Nature Communications(2024)10.1038/s41467-024-52671-1

N/A

0.286DataRank · unranked

4 citations

Josue Pacheco, Kyumin Kim, Ayub Bokani, Fumiaki Ito, Diako Ebrahimi +2 more

Structural Model for Deoxycytidine Deamination Mechanisms of the HIV-1 Inactivation Enzyme APOBEC3G

UNC Libraries(2020)10.17615/p523-w178

N/A

0DataRank · unranked

0 citations

Courtney Prochnow, Linda Chelico, Myron F. Goodman, Xiaojiang S. Chen, Dorothy A. Erie

Polθ reverse transcribes RNA and promotes RNA-templated DNA repair

Science Advances(2021)10.1126/sciadv.abf1771

N/A

0DataRank · unranked

104 citations

Jiemin Zhao, Shane McDevitt, Timur Rusanov, Trung Hoàng, Nikita Borisonnik +13 more

The Roles of APOBEC-mediated RNA Editing in SARS-CoV-2 Mutations, Replication and Fitness

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.18.473309

N/A

0DataRank · unranked

18 citations

Peter Calabrese, Shanshan Wang, Chao Qin, Youliang Rao, Pinghui Feng +2 more

The roles of APOBEC-mediated RNA editing in SARS-CoV-2 mutations, replication and fitness

Scientific Reports(2022)10.1038/s41598-022-19067-x

N/A

0DataRank · unranked

104 citations

Peter Calabrese, Shanshan Wang, Chao Qin, Youliang Rao, Pinghui Feng +2 more

Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G

Nature Communications(2022)10.1038/s41467-022-35201-9

N/A

0DataRank · unranked

13 citations

Kyumin Kim, Shuxing Li, Josue Pacheco, Xiaojiang S. Chen, Hanjing Yang

The Roles of APOBEC-mediated RNA Editing in SARS-CoV-2 Mutations, Replication and Fitness

Research Square(2022)10.21203/rs.3.rs-1524060/v1

N/A

0DataRank · unranked

20 citations

Peter Calabrese, Shanshan Wang, Chao Qin, Youliang Rao, Pinghui Feng +2 more

Alkyne as a Latent Warhead to Covalently Target SARS-CoV-2 Main Protease

Journal of Medicinal Chemistry(2023)10.1021/acs.jmedchem.3c00810

N/A

0DataRank · unranked

23 citations

William Fried, Saba R. Aliyari, Joshua Feng, Chao Qin, Shilei Zhang +7 more

Unraveling the Enzyme-Substrate Properties for APOBEC3A-Mediated RNA Editing

Journal of Molecular Biology(2023)10.1016/j.jmb.2023.168198

N/A

0DataRank · unranked

22 citations

Alan Shi, Kori Kelley, Xiaojiang S. Chen, Kyumin Kim

Structural basis of HIV-1 Vif-mediated E3 ligase targeting of host APOBEC3H

Nature Communications(2023)10.1038/s41467-023-40955-x

N/A

0DataRank · unranked

17 citations

Ana L. Alvarez-Cabrera, Kyumin Kim, Z. Hong Zhou, Xiaojiang S. Chen, Fumiaki Ito

Identification of RBM46 as A Novel APOBEC1 Cofactor for C-to-U RNA-Editing Activity

Journal of Molecular Biology(2023)10.1016/j.jmb.2023.168333

N/A

0DataRank · unranked

6 citations

Kyumin Kim, Nicolas Gelvez, Claire Chung, Jean-François Goût, Benjamin Fixman +3 more

Promoter-independent synthesis of chemically modified RNA by human DNA polymerase θ variants

RNA(2023)10.1261/rna.079396.122

N/A

0DataRank · unranked

1 citations

Tatiana Kent, Leonid Minakhin, Ziyuan Li, Jozef Madžo, Xiaojiang S. Chen +2 more

Mesoscale DNA Features Impact APOBEC3A and APOBEC3B Deaminase Activity and Shape Tumor Mutational Landscapes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.02.551499

N/A

0DataRank · unranked

5 citations

Pedro Ortega, Ramin Sakhtemani, Lavanya Manjunath, Sunwoo Oh, Elodie Bournique +9 more

Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.17.567629

N/A

0DataRank · unranked

2 citations

Hanjing Yang, Z. Hong Zhou, Xiaojiang S. Chen, Fumiaki Ito

Discovery of a small-molecule inhibitor that traps Polθ on DNA and synergizes with PARP inhibitors

Nature Communications(2024)10.1038/s41467-024-46593-1

N/A

0DataRank · unranked

47 citations

Mrityunjay Tyagi, Leonid Minakhin, Gurushankar Chandramouly, Taylor Tredinnick, Mercy Ramanjulu +18 more

Mesoscale DNA features impact APOBEC3A and APOBEC3B deaminase activity and shape tumor mutational landscapes

Nature Communications(2024)10.1038/s41467-024-45909-5

N/A

0DataRank · unranked

35 citations

Pedro Ortega, Ramin Sakhtemani, Lavanya Manjunath, Sunwoo Oh, Elodie Bournique +9 more

Validation of the APOBEC3A-Mediated RNA Single Base Substitution Signature and Proposal of Novel APOBEC1, APOBEC3B, and APOBEC3G RNA Signatures

Journal of Molecular Biology(2024)10.1016/j.jmb.2024.168854

N/A

0DataRank · unranked

7 citations

Marcos Díaz‐Gay, Connor Qiu, Tamara Margaryan, Brian Lee, Xiaojiang S. Chen +1 more

PNAbind: Structure-based prediction of protein-nucleic acid binding using graph neural networks

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.27.582387

N/A

0DataRank · unranked

1 citations

Raktim Mitra, Jiawei Huang, Xiaojiang S. Chen, Remo Rohs, Jared M. Sagendorf

Molecular mechanism for regulating APOBEC3G DNA editing function by the non-catalytic domain

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.11.584510

N/A

0DataRank · unranked

1 citations

Josue Pacheco, Kyumin Kim, Diako Ebrahimi, Fumiaki Ito, Xiaojiang S. Chen +1 more

Structural Basis for Polθ-Helicase DNA Binding and Microhomology-Mediated End-Joining

The Medicine Forum(2024)10.1101/2024.06.07.597860

N/A

0DataRank · unranked

1 citations

Ziyuan Li, Leonid Minakhin, Htet A. Khant, Richard T. Pomerantz, Xiaojiang S. Chen +1 more

Structural basis for Polθ-helicase DNA binding and microhomology-mediated end-joining

Nature Communications(2025)10.1038/s41467-025-58441-x

N/A

0DataRank · unranked

13 citations

Ziyuan Li, Leonid Minakhin, Htet A. Khant, Richard T. Pomerantz, Xiaojiang S. Chen +1 more

Both Domains of APOBEC3F Recognize AA RNA Motifs to Support HIV-1 Virion Encapsidation and Antiviral Function

Journal of Molecular Biology(2025)10.1016/j.jmb.2025.169536

N/A

0DataRank · unranked

1 citations

Maria Yousefi, Hanjing Yang, Shuxing Li, Linda Chelico, Xiaojiang S. Chen +1 more

Low-error RNA sequencing techniques for detecting RNA editing by APOBECs: Circular RNAseq assay and safe-sequencing system (SSS)

Methods in enzymology on CD-ROM/Methods in enzymology(2025)10.1016/bs.mie.2024.12.004

N/A

0DataRank · unranked

0 citations

Benjamin Fixman, Xiaojiang S. Chen, Shanshan Wang

Fluorescent shift assay for APOBEC-mediated RNA editing

Methods in enzymology on CD-ROM/Methods in enzymology(2025)10.1016/bs.mie.2024.12.002

N/A

0DataRank · unranked

0 citations

Benjamin Fixman, Xiaojiang S. Chen, Shanshan Wang

APOBEC3B Promotes SARS-CoV-2 Through Activation of PKR/eIF2⍺ and AMPD2 Dysregulation

Preprints.org(2025)10.20944/preprints202507.2028.v1

N/A

0DataRank · unranked

0 citations

Lavanya Manjunath, Philip Sell, Shanshan Wang, Tamara Margaryan, Connor Qiu +4 more

Understanding the structural basis of HIV-1 restriction by the full length double-domain APOBEC3G

Nature Communications(2020)10.1038/s41467-020-14377-y

N/A

0DataRank · unranked

62 citations

Fumiaki Ito, Aaron Wolfe, Shuxing Li, Nazanin Mohammadzadeh, Robin P. Love +6 more

APOBEC3B Promotes SARS-CoV-2 Through Activation of PKR/eIF2⍺ and AMPD2 Dysregulation

Viruses(2025)10.3390/v17091176

N/A

0DataRank · unranked

0 citations

Lavanya Manjunath, Philip Sell, Shanshan Wang, Tamara Margaryan, Connor Qiu +4 more

The structure of APOBEC1 and insights into its RNA and DNA substrate selectivity

NAR Cancer(2020)10.1093/narcan/zcaa027

N/A

0DataRank · unranked

28 citations

Shuxing Li, Cody Goedderz, Xiaojiang S. Chen, Aaron Wolfe