Billy K. Poon

Materials ScienceBiochemistry, Genetics and Molecular BiologyPhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 20 papers. Top paper: “AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination”.

AlphaFold predictions are valuable hypotheses and accelerate but do not replace experimental structure determination

Nature Methods(2023)10.1038/s41592-023-02087-4

N/A

0.884DataRank · unranked

362 citations

Dorothée Liebschner, Tristan I. Croll, Christopher J. Williams, Airlie J. McCoy, Billy K. Poon +6 more

AlphaFold predictions are valuable hypotheses, and accelerate but do not replace experimental structure determination

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517405

N/A

0.587DataRank · unranked

49 citations

Dorothée Liebschner, Tristan I. Croll, Christopher J. Williams, Airlie J. McCoy, Billy K. Poon +6 more

Likelihood-based interactive local docking into cryo-EM maps in ChimeraX

Acta Crystallographica Section D Structural Biology(2024)10.1107/s2059798324006776

N/A

0.394DataRank · unranked

8 citations

Eric F. Pettersen, Airlie J. McCoy, Tristan I. Croll, Thomas C. Terwilliger, Billy K. Poon +4 more

Integration of software tools for integrative modeling of biomolecular systems

Journal of Structural Biology(2022)10.1016/j.jsb.2022.107841

N/A

0DataRank · unranked

19 citations

Thomas-Otavio Peulen, Benjamin Webb, Billy K. Poon, James S. Fraser, Paul D. Adams +2 more

Improved AlphaFold modeling with implicit experimental information

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.07.475350

N/A

0DataRank · unranked

28 citations

Billy K. Poon, Pavel V. Afonine, Christopher J. Schlicksup, Tristan I. Croll, Claudia Millán +4 more

Accelerating crystal structure determination with iterative AlphaFold prediction

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.18.517112

N/A

0DataRank · unranked

7 citations

Pavel V. Afonine, Dorothée Liebschner, Tristan I. Croll, Airlie J. McCoy, Robert D. Oeffner +6 more

Conformational space exploration of cryo-EM structures by variability refinement

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.23.521827

N/A

0DataRank · unranked

4 citations

Alexia Gobet, Loïck Moissonnier, Billy K. Poon, Vincent Chaptal, Pavel V. Afonine

Accelerating crystal structure determination with iterative AlphaFold prediction

Acta Crystallographica Section D Structural Biology(2023)10.1107/s205979832300102x

N/A

0DataRank · unranked

58 citations

Pavel V. Afonine, Dorothée Liebschner, Tristan I. Croll, Airlie J. McCoy, Robert D. Oeffner +6 more

In situ ligand restraints from quantum-mechanical methods

Acta Crystallographica Section D Structural Biology(2023)10.1107/s2059798323000025

N/A

0DataRank · unranked

21 citations

Nigel W. Moriarty, Billy K. Poon, Paul D. Adams, Dorothée Liebschner

Conformational space exploration of cryo-EM structures by variability refinement

Biochimica et Biophysica Acta (BBA) - Biomembranes(2023)10.1016/j.bbamem.2023.184133

N/A

0DataRank · unranked

19 citations

Alexia Gobet, Loïck Moissonnier, Juliette Martin, Billy K. Poon, Vincent Chaptal +1 more

Improved joint X-ray and neutron refinement procedure in Phenix

Acta Crystallographica Section D Structural Biology(2023)10.1107/s2059798323008914

N/A

0DataRank · unranked

11 citations

Pavel V. Afonine, Billy K. Poon, Nigel W. Moriarty, Paul D. Adams, Dorothée Liebschner

Interpreting macromolecular diffraction through simulation

Methods in enzymology on CD-ROM/Methods in enzymology(2023)10.1016/bs.mie.2023.06.011

N/A

0DataRank · unranked

1 citations

Derek Mendez, Billy K. Poon, Johannes Blaschke, Felix Wittwer, Michael E. Wall +2 more

The Phenix‐AlphaFold webservice: Enabling AlphaFold predictions for use in Phenix

Protein Science(2024)10.1002/pro.4992

N/A

0DataRank · unranked

7 citations

Thomas C. Terwilliger, Paul D. Adams, Billy K. Poon

ExaFEL: extreme-scale real-time data processing for X-ray free electron laser science

Frontiers in High Performance Computing(2024)10.3389/fhpcp.2024.1414569

N/A

0DataRank · unranked

2 citations

Robert Bolotovsky, Aaron S. Brewster, Jeffrey J. Donatelli, Antoine Dujardin, Wu-chun Feng +22 more

AQuaRef: machine learning accelerated quantum refinement of protein structures

Nature Communications(2025)10.1038/s41467-025-64313-1

N/A

0DataRank · unranked

11 citations

Małgorzata Biczysko, Kavindri Ranasinghe, Nigel W. Moriarty, Hatice Gökcan, Holger Kruse +7 more

Serial-femtosecond crystallography reveals how a phytochrome variant couples chromophore and protein structural changes

Science Advances(2025)10.1126/sciadv.adp2665

N/A

0DataRank · unranked

4 citations

Michal Szczepek, Andrea Schmidt, Asmit Bhowmick, Medhanjali Dasgupta, Megan J. Mackintosh +39 more

CERES: a cryo-EM re-refinement system for continuous improvement of deposited models

Acta Crystallographica Section D Structural Biology(2020)10.1107/s2059798320015879

N/A

0DataRank · unranked

22 citations

Pavel V. Afonine, Nigel W. Moriarty, Billy K. Poon, Vincent B. Chen, Paul D. Adams +1 more

cctbx.xfel : a suite for processing serial crystallographic data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.04.652045

N/A

0DataRank · unranked

2 citations

Daniel W. Paley⧓, Asmit Bhowmick, David Moreau, I.D. Young, Derek Mendez +4 more

Improved AlphaFold modeling with implicit experimental information

Nature Methods(2022)10.1038/s41592-022-01645-6

N/A

0DataRank · unranked

138 citations

Billy K. Poon, Pavel V. Afonine, Christopher J. Schlicksup, Tristan I. Croll, Claudia Millán +4 more

Putting AlphaFold models to work with phenix.process_predicted_model and ISOLDE

Acta Crystallographica Section D Structural Biology(2022)10.1107/s2059798322010026

N/A

0DataRank · unranked

69 citations

Tristan I. Croll, Claudia Millán, Billy K. Poon, Christopher J. Schlicksup, Randy J. Read +2 more