🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Deogratius Ssemwanga

Uganda Virus Research Institute

ORCID: 0000-0001-9675-4234
Immunology and MicrobiologyMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.6Author DataRank

Indexed papers

6in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Phylogenetic Networks and Parameters Inferred from HIV Nucleotide Sequences of High-Risk and General Population Groups in Uganda: Implications for Epidemic Control

Viruses(2021)10.3390/v13060970
Top 26%
0.776DataRank
Top 26%8 citations

Deogratius Ssemwanga, Rebecca N. Nsubuga, Noah Kiwanuka, Bernard S. Bagaya, John M. Kitayimbwa +5 more

Papers

Driven by 18 papers — median percentile 51. Top paper: “Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: An Individual-Patient- and Sequence-Level Meta-Analysis”.

Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: An Individual-Patient- and Sequence-Level Meta-Analysis

PLOS Medicine(2015)10.1371/journal.pmed.1001810
N/A
0.816DataRank · unranked
229 citations

Jose Luis Blanco, Michael R. Jordan, Jonathan Taylor, Philippe Lemey, Vici Varghese +88 more

Phylogenetic Networks and Parameters Inferred from HIV Nucleotide Sequences of High-Risk and General Population Groups in Uganda: Implications for Epidemic Control

Viruses(2021)10.3390/v13060970
Top 26%
0.776DataRank
Top 26%8 citations

Deogratius Ssemwanga, Rebecca N. Nsubuga, Noah Kiwanuka, Bernard S. Bagaya, John M. Kitayimbwa +5 more

Mapping of HIV-1C Transmission Networks Reveals Extensive Spread of Viral Lineages Across Villages in Botswana Treatment-as-Prevention Trial

The Journal of Infectious Diseases(2020)10.1093/infdis/jiaa276
Top 28%
0.704DataRank
Top 28%17 citations

Melissa Zahralban-Steele, Sikhulile Moyo, Tapiwa Nkhisang, Dorcas Maruapula, Mary Fran McLane +45 more

HIV-1 drug resistance genotyping success rates and correlates of Dried-blood spots and plasma specimen genotyping failure in a resource-limited setting

BMC Infectious Diseases(2022)10.1186/s12879-022-07453-9
N/A
0.662DataRank · unranked
17 citations

Nicholas Bbosa, Dan Bugembe Lule, Maria Nannyonjo, Sandra Lunkuse, Faridah Nassolo +5 more

Correction: Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: An Individual-Patient- and Sequence-Level Meta-Analysis

PLOS Medicine(2015)10.1371/journal.pmed.1001845
N/A
0.500DataRank · unranked
27 citations

Jose Luis Blanco, Michael R. Jordan, Jonathan Taylor, Philippe Lemey, Vici Varghese +89 more

HIVseqDB: a portable resource for NGS and sample metadata integration for HIV-1 drug resistance analysis

Bioinformatics Advances(2024)10.1093/bioadv/vbae008
Top 70%
0.165DataRank
Top 70%2 citations

Daudi Jjingo, Nicholas Bbosa, Daniel Lule Bugembe, David Patrick Kateete, I. King Jordan +3 more

HIV-1 drug resistance genotyping success rates and correlates of Dried-blood spots and plasma specimen genotyping failure in a resource-limited setting

10.21203/rs.3.rs-1345687/v1
N/A
0.151DataRank · unranked
1 citations

Nicholas Bbosa, Dan Bugembe Lule, Maria Nannyonjo, Sandra Lunkuse, Faridah Nassolo +5 more

QuasiFlow: a Nextflow pipeline for analysis of NGS-based HIV-1 drug resistance data

Bioinformatics Advances(2022)10.1093/bioadv/vbac089
N/A
0DataRank · unranked
3 citations

Daudi Jjingo, Ibra Lujumba, Nicholas Bbosa, Daniel Lule Bugembe, David Patrick Kateete +4 more

HIV-phyloTSI: Subtype-independent estimation of time since HIV-1 infection for cross-sectional measures of population incidence using deep sequence data

medRxiv(2022)10.1101/2022.05.15.22275117
N/A
0DataRank · unranked
9 citations

Lucie Abeler‐Dörner, Matthew Hall, Chris Wymant, David Bonsall, George MacIntyre-Cockett +44 more

Limited emergence of resistance to integrase strand transfer inhibitors (INSTIs) in ART-experienced participants failing dolutegravir-based antiretroviral therapy: a cross-sectional analysis of a Northeast Nigerian cohort

Journal of Antimicrobial Chemotherapy(2023)10.1093/jac/dkad195
N/A
0DataRank · unranked
26 citations

Ibrahim Musa Kida, Umar Abdullahi Maina, Amina Husaini Ibrahim, James Mshelia, Haruna Wisso +47 more

Demographics of sources of HIV-1 transmission in Zambia: a molecular epidemiology analysis in the HPTN 071 PopART study

The Lancet Microbe(2023)10.1016/s2666-5247(23)00220-3
N/A
0DataRank · unranked
15 citations

Tanya Golubchik, David Bonsall, Lucie Abeler‐Dörner, Mohammed Limbada, Barry Kosloff +81 more

Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic

UNC Libraries(2023)10.17615/qgaw-2t47
Top 100%
0DataRank
Top 100%0 citations

Pontiano Kaleebu, Tom Quinn, Deogratius Ssemwanga, Paul Kellam, A.J. Leigh Brown +29 more

Intra- and inter-subtype HIV diversity between 1994 and 2018 in southern Uganda: a longitudinal population-based study

Virus Evolution(2024)10.1093/ve/veae065
N/A
0DataRank · unranked
4 citations

Godfrey Kigozi, Michael A. Martin, Ronald M. Galiwango, Thomas C. Quinn, Andrew D. Redd +14 more

Detection of HIV-1 Transmission Clusters from Dried Blood Spots within a Universal Test-and-Treat Trial in East Africa

Viruses(2022)10.3390/v14081673
N/A
0DataRank · unranked
6 citations

Jesus F. Salazar-Gonzalez, Deogratius Ssemwanga, Edwin D. Charlebois, James Ayieko, Heather E. Grant +8 more

Increasing intra- and inter-subtype HIV diversity despite declining HIV incidence in Uganda

medRxiv(2024)10.1101/2024.03.14.24303990
N/A
0DataRank · unranked
2 citations

Godfrey Kigozi, Michael A. Martin, Ronald M. Galiwango, Thomas C. Quinn, Andrew D. Redd +14 more

Quantifying prevalence and risk factors of HIV multiple infection in Uganda from population-based deep-sequence data

PLoS Pathogens(2025)10.1371/journal.ppat.1013065
N/A
0DataRank · unranked
0 citations

Andrea Brizzi, Xiaoyue Xi, Ronald M. Galiwango, Sikhulile Moyo, Deogratius Ssemwanga +14 more

A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa

Science(2021)10.1126/science.abj4336
N/A
0DataRank · unranked
237 citations

Marta Giovanetti, Houriiyah Tegally, James Emmanuel San, Richard Lessells, Diego F. Cuadros +95 more

Pervasive and non-random recombination in near full-length HIV genomes from Uganda

Virus Evolution(2020)10.1093/ve/veaa004
N/A
0DataRank · unranked
26 citations

Emma B. Hodcroft, Deogratius Ssemwanga, John M. Kitayimbwa, Gonzalo Yebra, Luis Roger Esquivel Gomez +17 more