Sayaka Miura

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 19 papers. Top paper: “An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic”.

An evolutionary portrait of the progenitor SARS-CoV-2 and its dominant offshoots in COVID-19 pandemic

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.24.311845

N/A

0.470DataRank · unranked

22 citations

Qiqing Tao, Steven Weaver, Maxwell Sanderford, Marcos A. Caraballo‐Ortiz, Sudip Sharma +3 more

PathFinder: Bayesian inference of clone migration histories in cancer

Bioinformatics(2020)10.1093/bioinformatics/btaa795

N/A

0.442DataRank · unranked

18 citations

Antonia Chroni, Koichiro Tamura, Maxwell Sanderford, Olumide Oladeinde, Vivian Aly +3 more

Clone Phylogenetics Reveals Metastatic Tumor Migrations, Maps, and Models

Cancers(2022)10.3390/cancers14174326

N/A

0.345DataRank · unranked

9 citations

Sayaka Miura, Lauren E Hamilton, Tracy Vu, Stephen G. Gaffney, Vivian Aly +5 more

Methods for Estimating Personal Disease Risk and Phylogenetic Diversity of Hematopoietic Stem Cells

Molecular Biology and Evolution(2023)10.1093/molbev/msad279

N/A

0.104DataRank · unranked

1 citations

Glenn S. Gerhard, Sudip Sharma, Anastasia Yankovskiy, Sayaka Miura, Sudhir Kumar +1 more

An Evolutionary Portrait of the Progenitor SARS-CoV-2 and Its Dominant Offshoots in COVID-19 Pandemic

Molecular Biology and Evolution(2021)10.1093/molbev/msab118

N/A

0DataRank · unranked

81 citations

Qiqing Tao, Steven Weaver, Maxwell Sanderford, Marcos A. Caraballo‐Ortiz, Sudip Sharma +3 more

Migrations of cancer cells through the lens of phylogenetic biogeography

Scientific Reports(2021)10.1038/s41598-021-96215-9

N/A

0DataRank · unranked

10 citations

Sayaka Miura, Olumide Oladeinde, Vivian Aly, Sudhir Kumar, Antonia Chroni

TopHap: Rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.13.472454

N/A

0DataRank · unranked

2 citations

Sayaka Miura, Maxwell Sanderford, Tenzin Dolker, Qiqing Tao, Steven Weaver +3 more

Phylomedicine of mutational processes in somatic cancer cell populations

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.02.438268

N/A

0DataRank · unranked

0 citations

Tracy Vu, Jiyeong Choi, Sudhir Kumar, Sayaka Miura

Molecular evidence for SARS-CoV-2 in samples collected from patients with morbilliform eruptions since late 2019 in Lombardy, northern Italy

Environmental Research(2022)10.1016/j.envres.2022.113979

N/A

0DataRank · unranked

27 citations

Marta Canuti, Silvia Bianchi, Sudhir Kumar, Clara Fappani, María Gori +11 more

A phylogenetic approach to study the evolution of somatic mutational processes in cancer

Communications Biology(2022)10.1038/s42003-022-03560-0

N/A

0DataRank · unranked

12 citations

Tracy Vu, Jiyeong Choi, Jeffrey P. Townsend, Sajjad Karim, Sudhir Kumar +1 more

TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity

Bioinformatics(2022)10.1093/bioinformatics/btac186

N/A

0DataRank · unranked

11 citations

Sayaka Miura, Maxwell Sanderford, Tenzin Dolker, Qiqing Tao, Steven Weaver +3 more

MOCA for Integrated Analysis of Gene Expression and Genetic Variation in Single Cells

Frontiers in Genetics(2022)10.3389/fgene.2022.831040

N/A

0DataRank · unranked

1 citations

Hannah Kim, Sudhir Kumar, Sayaka Miura, Jared Huzar

Bootstrap confidence for molecular evolutionary estimates from tumor bulk sequencing data

Frontiers in Bioinformatics(2023)10.3389/fbinf.2023.1090730

N/A

0DataRank · unranked

2 citations

Madelyn Shenoy, Maxwell Sanderford, Sudhir Kumar, Sayaka Miura, Jared Huzar

Improving cellular phylogenies through the integrated use of mutation order and optimality principles

Computational and Structural Biotechnology Journal(2023)10.1016/j.csbj.2023.07.018

N/A

0DataRank · unranked

2 citations

Tenzin Dolker, Maxwell Sanderford, Sudhir Kumar, Sayaka Miura

GenoPath: a pipeline to infer tumor clone composition, mutational history, and metastatic cell migration events from tumor DNA sequencing data

Frontiers in Bioinformatics(2025)10.3389/fbinf.2025.1615834

N/A

0DataRank · unranked

1 citations

Shikha Singh, Sudhir Kumar, Sayaka Miura, R. Tobin

An Evolutionary Metric for Estimating PhyloAges from Bulk Sequencing of Hematopoietic Stem Cells Reveals the Tempo of Blood Aging in Cancer and Longevity

Journal of Molecular Evolution(2025)10.1007/s00239-025-10296-y

N/A

0DataRank · unranked

0 citations

R. Tobin, Walter Wolfsberger, Tarás K. Oleksyk, Sayaka Miura, Glenn S. Gerhard +2 more

A new method for inferring timetrees from temporally sampled molecular sequences

PLoS Computational Biology(2020)10.1371/journal.pcbi.1007046

N/A

0DataRank · unranked

28 citations

Koichiro Tamura, Qiqing Tao, Louise A. Huuki-Myers, Sergei L. Kosakovsky Pond, Jessica M. Priest +3 more

Power and pitfalls of computational methods for inferring clone phylogenies and mutation orders from bulk sequencing data

Scientific Reports(2020)10.1038/s41598-020-59006-2

N/A

0DataRank · unranked

31 citations

Tracy Vu, Jiamin Deng, Tiffany Buturla, Olumide Oladeinde, Jiyeong Choi +2 more

PathFinder: Bayesian inference of clone migration histories in cancer

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.10.197194

N/A

0DataRank · unranked

0 citations

Antonia Chroni, Koichiro Tamura, Maxwell Sanderford, Olumide Oladeinde, Vivian Aly +3 more