Xiaoqian Jiang

Also affiliated with World Resources Institute, Shandong University, Southeast University, The University of Texas Health Science Center, Interface (United Kingdom), Southeast University, The University of Texas Health Science Center at Houston

Computer ScienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.2Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Privacy-protecting, reliable response data discovery using COVID-19 patient observations

Journal of the American Medical Informatics Association(2021)10.1093/jamia/ocab054

Top 24%

0.850DataRank

Top 24%17 citations

Larissa Neumann, Paulina Paul, Michele E. Day, Michael Aratow, Douglas S. Bell +55 more

Papers

Driven by 132 papers — median percentile 61. Top paper: “Responsible, practical genomic data sharing that accelerates research”.

Responsible, practical genomic data sharing that accelerates research

Nature Reviews Genetics(2020)10.1038/s41576-020-0257-5

N/A

4.7DataRank · unranked

147 citations

Anna C. Greene, Deepashree Venkatesh Prasad, Xiaoqian Jiang, Casey S. Greene, James Brian Byrd

iDASH secure genome analysis competition 2018: blockchain genomic data access logging, homomorphic encryption on GWAS, and DNA segment searching

BMC Medical Genomics(2020)10.1186/s12920-020-0715-0

N/A

1.3DataRank · unranked

41 citations

Xiaoqian Jiang, Haixu Tang, Xiaofeng Wang, Tyler Bath, Diyue Bu +7 more

Improving large language models for clinical named entity recognition via prompt engineering

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocad259

N/A

0.853DataRank · unranked

293 citations

Qingyu Chen, Jingcheng Du, Xueqing Peng, Vipina K. Keloth, Xu Zuo +7 more

Privacy-protecting, reliable response data discovery using COVID-19 patient observations

Journal of the American Medical Informatics Association(2021)10.1093/jamia/ocab054

Top 24%

0.850DataRank

Top 24%17 citations

Larissa Neumann, Paulina Paul, Michele E. Day, Michael Aratow, Douglas S. Bell +55 more

Systematic design and data-driven evaluation of social determinants of health ontology (SDoHO)

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad096

N/A

0.713DataRank · unranked

25 citations

Fang Li, Xinyue Hu, Vipina K. Keloth, Meng Zhang, Sunyang Fu +9 more

Ultrafast homomorphic encryption models enable secure outsourcing of genotype imputation

Cell Systems(2021)10.1016/j.cels.2021.07.010

N/A

0.644DataRank · unranked

72 citations

Arif Ozgun Harmanci, Jean-Philippe Bossuat, Sergiu Carpov, Jung Hee Cheon, Ilaria Chillotti +16 more

Drug repurposing for COVID-19 using graph neural network and harmonizing multiple evidence

Scientific Reports(2021)10.1038/s41598-021-02353-5

N/A

0.639DataRank · unranked

70 citations

Yinyin Wang, Luyao Chen, Zhongming Zhao, Sean I. Savitz, Xiaoqian Jiang +3 more

Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad049

Top 32%

0.623DataRank

Top 32%17 citations

Anh T. Pham, Maxim Edelson, Jihoon Kim, Jason R. Chan, Yash P. Gupta +54 more

Non-invasive arterial blood pressure measurement and SpO2 estimation using PPG signal: a deep learning framework

BMC Medical Informatics and Decision Making(2023)10.1186/s12911-023-02215-2

N/A

0.606DataRank · unranked

56 citations

Kaichen Tang, Yu‐Chun Hsu, Tongtong Huang, Dulin Wang, Wentao Li +4 more

Multiple imputation for analysis of incomplete data in distributed health data networks

Nature Communications(2020)10.1038/s41467-020-19270-2

N/A

0.598DataRank · unranked

53 citations

Yi Deng, Xiaoqian Jiang, Qi Long, Changgee Chang

Artificial intelligence in clinical and translational science: Successes, challenges and opportunities

Clinical and Translational Science(2021)10.1111/cts.13175

N/A

0.593DataRank · unranked

51 citations

Paula K. Shireman, Funda Meric‐Bernstam, Meredith Zozus, Xiaoqian Jiang, Bradley B. Brimhall +9 more

Emulate randomized clinical trials using heterogeneous treatment effect estimation for personalized treatments: Methodology review and benchmark

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104256

N/A

0.505DataRank · unranked

28 citations

Pulakesh Upadhyaya, Luyao Chen, Xiaoqian Jiang, Yejin Kim, Yaobin Ling

De-identification is not enough: a comparison between de-identified and synthetic clinical notes

Scientific Reports(2024)10.1038/s41598-024-81170-y

N/A

0.505DataRank · unranked

28 citations

Yao-Shun Chuang, Noman Mohammed, Xiaoqian Jiang, Atiquer Rahman Sarkar

COVID-19 trial graph: a linked graph for COVID-19 clinical trials

Journal of the American Medical Informatics Association(2021)10.1093/jamia/ocab078

Top 39%

0.484DataRank

Top 39%8 citations

Qing Wang, Jingqi Wang, Prerana Ramesh, Yang Xiang, Xiaoqian Jiang +2 more

Multimodal Phenotyping of Alzheimer’s Disease with Longitudinal Magnetic Resonance Imaging and Cognitive Function Data

Scientific Reports(2020)10.1038/s41598-020-62263-w

N/A

0.470DataRank · unranked

22 citations

Xiaoqian Jiang, Luca Giancardo, Danilo Peña, Avram S. Bukhbinder, Albert Y. Amran +3 more

Addressing ethical issues in healthcare artificial intelligence using a lifecycle-informed process

JAMIA Open(2024)10.1093/jamiaopen/ooae108

N/A

0.442DataRank · unranked

18 citations

Jean‐Christophe Bélisle‐Pipon, Barbara J. Evans, Kadija Ferryman, Xiaoqian Jiang, Camille Nebeker +12 more

Human Endogenous Retroviruses in Glioblastoma Multiforme

Microorganisms(2021)10.3390/microorganisms9040764

N/A

0.442DataRank · unranked

18 citations

Yuntao Yang, Ningyan Zhang, Claudio Soto, Xiaoqian Jiang, Zhiqiang An +2 more

Privacy-Preserving and Efficient Verification of the Outcome in Genome-Wide Association Studies

Proceedings on Privacy Enhancing Technologies(2022)10.56553/popets-2022-0094

N/A

0.406DataRank · unranked

14 citations

Leonard Dervishi, Erman Ayday, Apostolos Pyrgelis, Juan Ramón Troncoso-Pastoriza, Jean‐Pierre Hubaux +3 more

Synoptic reporting by summarizing cancer pathology reports using large language models

npj Health Systems(2025)10.1038/s44401-025-00013-8

N/A

0.380DataRank · unranked

8 citations

Shaika Chowdhury, Xiaodi Li, Vincent Buchner, Zhe He, Rui Zhang +5 more

Stratifying heart failure patients with graph neural network and transformer using Electronic Health Records to optimize drug response prediction

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocae137

N/A

0.360DataRank · unranked

10 citations

Yongbin Chen, Pengyang Li, Sivaraman Rajaganapathy, Andrew Wen, Xiao Ma +12 more

DeepFace: Deep-learning-based framework to contextualize orofacial-cleft-related variants during human embryonic craniofacial development

Human Genetics and Genomics Advances(2024)10.1016/j.xhgg.2024.100312

N/A

0.360DataRank · unranked

10 citations

Toshiyuki Itai, Guangsheng Pei, Fangfang Yan, Yan Chu, Xiaoqian Jiang +7 more

Mining for Equitable Health: Assessing the Impact of Missing Data in Electronic Health Records

medRxiv(2022)10.1101/2022.05.09.22274680

N/A

0.330DataRank · unranked

8 citations

Lyle Ungar, Danielle L. Mowery, Xiaoqian Jiang, Qi Long, Emily Getzen

Counterfactual analysis of differential comorbidity risk factors in Alzheimer’s disease and related dementias

PLOS Digital Health(2022)10.1371/journal.pdig.0000018

N/A

0.312DataRank · unranked

7 citations

Kai Zhang, Sean I. Savitz, Luyao Chen, Paul E. Schulz, Xiaoqian Jiang +1 more

Retraction Note: Identification of de novo mutations in prenatal neurodevelopment-associated genes in schizophrenia in two Han Chinese patient-sibling family-based cohorts

Translational Psychiatry(2020)10.1038/s41398-020-01116-6

N/A

0.308DataRank · unranked

4 citations

Daizhan Zhou, Yin‐Ying Wang, Peilin Jia, Chunling Wan, Xingwang Li +13 more

Clinical outcome-guided deep temporal clustering for disease progression subtyping

Journal of Biomedical Informatics(2024)10.1016/j.jbi.2024.104732

N/A

0.290DataRank · unranked

4 citations

Xiaotian Ma, Paul E. Schulz, Xiaoqian Jiang, Yejin Kim, Dulin Wang

Robust privacy amidst innovation with large language models through a critical assessment of the risks

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocaf037

N/A

0.290DataRank · unranked

5 citations

Atiquer Rahman Sarkar, Yu-Chun Hsu, Noman Mohammed, Xiaoqian Jiang, Yao-Shun Chuang

Synoptic Reporting by Summarizing Cancer Pathology Reports using Large Language Models

medRxiv(2024)10.1101/2024.04.26.24306452

N/A

0.269DataRank · unranked

5 citations

Shaika Chowdhury, Vincent Buchner, Zhe He, Xiaoqian Jiang, Ping Yang +3 more

Retracted: Identification of de novo mutations in prenatal neurodevelopment-associated genes in schizophrenia in two Han Chinese patient-sibling family-based cohorts

Translational Psychiatry(2020)10.1038/s41398-020-00987-z

N/A

0.269DataRank · unranked

5 citations

Daizhan Zhou, Yin‐Ying Wang, Peilin Jia, Chunling Wan, Xingwang Li +13 more

AD-Syn-Net: systematic identification of Alzheimer’s disease-associated mutation and co-mutation vulnerabilities via deep learning

Briefings in Bioinformatics(2023)10.1093/bib/bbad030

N/A

0.241DataRank · unranked

4 citations

Zeynep H. Coban Akdemir, Ruixuan Gao, Xiaoqian Jiang, Gloria Sheynkman, Erxi Wu +4 more

Generalizable self-supervised learning for brain CTA in acute stroke

Computers in Biology and Medicine(2024)10.1016/j.compbiomed.2024.109337

N/A

0.241DataRank · unranked

4 citations

Samiksha Pachade, Kirk Roberts, Xiaoqian Jiang, Sunil A. Sheth, Luca Giancardo +1 more

SVAT: Secure outsourcing of variant annotation and genotype aggregation

BMC Bioinformatics(2022)10.1186/s12859-022-04959-6

N/A

0.208DataRank · unranked

3 citations

Su Wang, Xiaoqian Jiang, Arif Harmanci, Miran Kim

Use GPT-J Prompt Generation with RoBERTa for NER Models on Diagnosis Extraction of Periodontal Diagnosis from Electronic Dental Records

PubMed(2023)10.48550/arxiv.2311.10810

N/A

0.165DataRank · unranked

2 citations

Xiaoqian Jiang, Chun‐Teh Lee, Ryan Brandon, Duong Thuy Tran, Oluwabunmi Tokede +2 more

Descriptor: Benchmarking Secure Neural Network Evaluation Methods for Protein Sequence Classification (iDASH24)

IEEE data descriptions.(2024)10.1109/ieeedata.2024.3482283

Top 70%

0.165DataRank

Top 70%2 citations

Luyao Chen, Miran Kim, Xiaoqian Jiang, Arif Harmanci

An interpretable framework to identify responsive subgroups from clinical trials regarding treatment effects: Application to treatment of intracerebral hemorrhage

PLOS Digital Health(2024)10.1371/journal.pdig.0000493

N/A

0.165DataRank · unranked

2 citations

Muhammad Bilal Tariq, Kaichen Tang, Jaroslaw Aronowski, Yang C. Fann, Sean I. Savitz +3 more

Discover important donor-recipient risk factors and interactions in heart transplant primary graft dysfunction with machine learning

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocaf066

N/A

0.104DataRank · unranked

1 citations

Yafen Liang, Chia-Yuan Chang, Cheryl L. Brown, Xiaoqian Jiang, Xia Hu +2 more

Biomedical data repositories require governance for artificial intelligence/machine learning applications at every step

JAMIA Open(2025)10.1093/jamiaopen/ooaf134

Top 78%

0.104DataRank

Top 78%1 citations

Susannah Rose, Camille Nebecker, Laurie L. Novak, Yaël Bensoussan, You Chen +19 more

Drug-Target Network Study Reveals the Core Target-Protein Interactions of Various COVID-19 Treatments

Genes(2022)10.3390/genes13071210

N/A

0DataRank · unranked

0 citations

Hui Yu, Qiheng Yan, Bingrui Li, Andi Liu, Wendao Liu +5 more

Federated Generalized Linear Mixed Models for Collaborative Genome-wide Association Studies

arXiv (Cornell University)(2022)10.48550/arxiv.2210.00395

N/A

0DataRank · unranked

0 citations

Han Chen, Xiaoqian Jiang, Arif Harmanci, Wentao Li

Mining for equitable health: Assessing the impact of missing data in electronic health records

Journal of Biomedical Informatics(2023)10.1016/j.jbi.2022.104269

N/A

0DataRank · unranked

120 citations

Lyle Ungar, Danielle L. Mowery, Xiaoqian Jiang, Qi Long, Emily Getzen

AI-DrugNet: A network-based deep learning model for drug repurposing and combination therapy in neurological disorders

Computational and Structural Biotechnology Journal(2023)10.1016/j.csbj.2023.02.004

N/A

0DataRank · unranked

38 citations

Jun Yun, Zeynep H. Coban Akdemir, Xiaoqian Jiang, Erxi Wu, Jason H. Huang +3 more

Predicting multiple sclerosis severity with multimodal deep neural networks

BMC Medical Informatics and Decision Making(2023)10.1186/s12911-023-02354-6

N/A

0DataRank · unranked

31 citations

John A. Lincoln, Xiaoqian Jiang, Elmer V. Bernstam, Shayan Shams, Kai Zhang

Multi-task learning with dynamic re-weighting to achieve fairness in healthcare predictive modeling

Journal of Biomedical Informatics(2023)10.1016/j.jbi.2023.104399

N/A

0DataRank · unranked

27 citations

Sirui Ding, Na Zou, Xia Hu, Xiaoqian Jiang, Kai Zhang +1 more

A transformer-based deep learning approach for fairly predicting post-liver transplant risk factors

Journal of Biomedical Informatics(2023)10.1016/j.jbi.2023.104545

N/A

0DataRank · unranked

25 citations

Xiaoqian Jiang, Kai Zhang, Can Li

Privacy-preserving federated genome-wide association studies via dynamic sampling

Bioinformatics(2023)10.1093/bioinformatics/btad639

N/A

0DataRank · unranked

13 citations

Leonard Dervishi, Wentao Li, Erman Ayday, Xiaoqian Jiang, Jaideep Vaidya +1 more

Prediction of Brain Metastases Development in Patients With Lung Cancer by Explainable Artificial Intelligence From Electronic Health Records

JCO Clinical Cancer Informatics(2023)10.1200/cci.22.00141

N/A

0DataRank · unranked

9 citations

Rongbin Li, Yujia Zhou, Laila Rasmy, Degui Zhi, Ping Zhu +6 more

Using artificial intelligence to learn optimal regimen plan for Alzheimer’s disease

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad135

N/A

0DataRank · unranked

12 citations

Sivaraman Rajaganapathy, Trisha Das, Yejin Kim, Yongbin Chen, the Alzheimer’s Disease Neuroimaging Initiative +6 more

Federated generalized linear mixed models for collaborative genome-wide association studies

iScience(2023)10.1016/j.isci.2023.107227

N/A

0DataRank · unranked

9 citations

Han Chen, Xiaoqian Jiang, Arif Harmanci, Wentao Li

aBnormal motION capture In aCute Stroke (BIONICS): A Low-Cost Tele-Evaluation Tool for Automated Assessment of Upper Extremity Function in Stroke Patients

Neurorehabilitation and neural repair(2023)10.1177/15459683231184186

N/A

0DataRank · unranked

8 citations

Kaichen Tang, Emily A. Stevens, Melissa Howard, Dorothea Parker, Allyson Seals +4 more

Social and Behavior Factors of Alzheimer's Disease and Related Dementias: A National Study in the U.S.

American Journal of Preventive Medicine(2023)10.1016/j.amepre.2023.11.017

N/A

0DataRank · unranked

6 citations

Elizabeth Vásquez, Edward Valachovic, Lifang Hou, Yinan Zheng, Hua Xu +7 more

Privacy preserving identification of population stratification for collaborative genomic research

Bioinformatics(2023)10.1093/bioinformatics/btad274

N/A

0DataRank · unranked

5 citations

Wenbiao Li, Anisa Halimi, Xiaoqian Jiang, Jaideep Vaidya, Erman Ayday +1 more

A hierarchical strategy to minimize privacy risk when linking “De-identified” data in biomedical research consortia

Journal of Biomedical Informatics(2023)10.1016/j.jbi.2023.104322

N/A

0DataRank · unranked

6 citations

Xiaoqian Jiang, Tsung-Ting Kuo, Shiqiang Tao, Luyao Chen, Pritham M. Ram +3 more

Enoxaparin may be associated with lower rates of mortality than unfractionated heparin in neurocritical and surgical patients

Journal of Thrombosis and Thrombolysis(2023)10.1007/s11239-022-02755-w

N/A

0DataRank · unranked

4 citations

Catherine To, Yaobin Ling, Kai Zhang, Xiaoqian Jiang, Elmer V. Bernstam +1 more

Explainable drug side effect prediction via biologically informed graph neural network

medRxiv(2023)10.1101/2023.05.26.23290615

N/A

0DataRank · unranked

4 citations

Ko‐Hong Lin, Rodrigo Machado‐Vieira, Jair C. Soares, Xiaoqian Jiang, Yejin Kim +1 more

Improving Large Language Models for Clinical Named Entity Recognition via Prompt Engineering

arXiv (Cornell University)(2023)10.48550/arxiv.2303.16416

N/A

0DataRank · unranked

67 citations

Chen, Qingyu, Du, Jingcheng, Xueqing Peng, Keloth, Vipina Kuttichi, Xu Zuo +7 more

Large Language Models for Healthcare Data Augmentation: An Example on Patient-Trial Matching

PubMed(2023)10.48550/arxiv.2303.16756

N/A

0DataRank · unranked

29 citations

Ruixiang Tang, Xiaoqian Jiang, Hu Xia, Jiayi Yuan

Fairly Predicting Graft Failure in Liver Transplant for Organ Assigning

PubMed(2023)10.48550/arxiv.2302.09400

N/A

0DataRank · unranked

9 citations

Ruixiang Tang, Daochen Zha, Na Zou, Kai Zhang, Xiaoqian Jiang +2 more

Multi-Task Learning for Post-transplant Cause of Death Analysis: A Case Study on Liver Transplant

PubMed(2023)10.48550/arxiv.2304.00012

N/A

0DataRank · unranked

8 citations

Qiaoyu Tan, Chia-Yuan Chang, Na Zou, Kai Zhang, Nathan R. Hoot +3 more

Local Contrastive Learning for Medical Image Recognition

PubMed(2023)10.48550/arxiv.2303.14153

N/A

0DataRank · unranked

6 citations

Ruixiang Tang, Xiaoqian Jiang, Xiaotian Ma, Xia Hu, Syed A Rizvi

Split Learning for Distributed Collaborative Training of Deep Learning Models in Health Informatics

PubMed(2023)10.48550/arxiv.2308.11027

N/A

0DataRank · unranked

6 citations

Chao Yan, Xinmeng Zhang, Gharib Gharibi, Zhijun Yin, Xiaoqian Jiang +2 more

Predicting Physiological Response in Heart Failure Management: A Graph Representation Learning Approach using Electronic Health Records

medRxiv(2023)10.1101/2023.01.27.23285129

N/A

0DataRank · unranked

5 citations

Yongbin Chen, Andrew Wen, Xiao Ma, Qiying Dai, Yue Yu +4 more

Enhancing Fairness in Disease Prediction by Optimizing Multiple Domain Adversarial Networks

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.04.551906

N/A

0DataRank · unranked

5 citations

Xinghua Shi, Hongchang Gao, Xiaoqian Jiang, Kai Zhang, Arif Harmanci +2 more

Towards Fair Patient-Trial Matching via Patient-Criterion Level Fairness Constraint

PubMed(2023)10.48550/arxiv.2303.13790

N/A

0DataRank · unranked

3 citations

Jiayi Yuan, Sirui Ding, Qiaoyu Tan, Kai Zhang, Xiaoqian Jiang +3 more

DiscoverPath: A Knowledge Refinement and Retrieval System for Interdisciplinarity on Biomedical Research

PubMed(2023)10.1145/3583780.3614739

N/A

0DataRank · unranked

3 citations

Guanchu Wang, Chia-Yuan Chang, Kwei-Herng Lai, Daochen Zha, Ruixiang Tang +6 more

Ensuring Trust in Genomics Research

PubMed(2023)10.1109/tps-isa58951.2023.00011

N/A

0DataRank · unranked

3 citations

Jaideep Vaidya, Xiaoqian Jiang, Amalio Telenti, Erman Ayday

A Transformer-Based Deep Learning Approach for Fairly Predicting Post-Liver Transplant Risk Factors

arXiv (Cornell University)(2023)10.48550/arxiv.2304.02780

N/A

0DataRank · unranked

2 citations

Xiaoqian Jiang, Kai Zhang, Can Li

Predicting multiple sclerosis disease severity with multimodal deep neural networks

arXiv (Cornell University)(2023)10.48550/arxiv.2304.04062

N/A

0DataRank · unranked

2 citations

John A. Lincoln, Xiaoqian Jiang, Elmer V. Bernstam, Shayan Shams, Kai Zhang

Inferring Personalized Treatment Effect of Antihypertensives on Alzheimer’s Disease Using Deep Learning

PubMed(2023)10.1109/ichi57859.2023.00018

N/A

0DataRank · unranked

2 citations

Yaobin Ling, Luyao Chen, Yejin Kim, Xiaoqian Jiang, Pulakesh Upadhyaya

Using Artificial Intelligence to Learn Optimal Regimen Plan for Alzheimer’s Disease

medRxiv(2023)10.1101/2023.01.26.23285064

N/A

0DataRank · unranked

1 citations

Trisha Das, Yejin Kim, Yongbin Chen, Qiying Dai, Xiaoyang Li +3 more

Sensitive Data Detection with High-Throughput Machine Learning Models in Electrical Health Records

PubMed(2023)10.48550/arxiv.2305.03169

N/A

0DataRank · unranked

1 citations

Xiaoqian Jiang, Kai Zhang

Disentangling accelerated cognitive decline from the normal aging process and unraveling its genetic components: A neuroimaging-based deep learning approach

Research Square(2023)10.21203/rs.3.rs-3328861/v1

N/A

0DataRank · unranked

1 citations

Yu‐Chun Hsu, Brisa S. Fernandes, Kai Zhang, Xiaoyang Li, Nitesh Enduru +5 more

DiscoverPath: A Knowledge Refinement and Retrieval System for Interdisciplinarity on Biomedical Research

arXiv (Cornell University)(2023)10.48550/arxiv.2309.01808

N/A

0DataRank · unranked

1 citations

Guanchu Wang, Chia‐Yuan Chang, Kwei-Herng Lai, Daochen Zha, Ruixiang Tang +6 more

Dental CLAIRES: Contrastive LAnguage Image REtrieval Search for Dental Research

arXiv (Cornell University)(2023)10.48550/arxiv.2306.15651

N/A

0DataRank · unranked

0 citations

Luyao Chen, Muhammad F. Walji, Luca Giancardo, Xiaoqian Jiang, Shayan Shams +1 more

FedGMMAT: Federated Generalized Linear Mixed Model Association Tests

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.03.560753

N/A

0DataRank · unranked

0 citations

Han Chen, Xiaoqian Jiang, Arif Harmanci, Wentao Li

Extracting periodontitis diagnosis in clinical notes with RoBERTa and regular expression

arXiv (Cornell University)(2023)10.48550/arxiv.2311.10809

N/A

0DataRank · unranked

0 citations

Chun‐Teh Lee, Ryan Brandon, Trung Duong Tran, Oluwabunmi Tokede, Muhammad F. Walji +2 more

CancerGPT for few shot drug pair synergy prediction using large pretrained language models

npj Digital Medicine(2024)10.1038/s41746-024-01024-9

N/A

0DataRank · unranked

110 citations

Sandesh Shetty, Advaith Kamath, Ajay Jaiswal, Xiaoqian Jiang, Ying Ding +2 more

SPeC: A Soft Prompt-Based Calibration on Performance Variability of Large Language Model in Clinical Notes Summarization

Journal of Biomedical Informatics(2024)10.1016/j.jbi.2024.104606

N/A

0DataRank · unranked

40 citations

Ruixiang Tang, Xiaoqian Jiang, Xia Hu, Yu-Neng Chuang

Ensemble pretrained language models to extract biomedical knowledge from literature

Journal of the American Medical Informatics Association(2024)10.1093/jamia/ocae061

N/A

0DataRank · unranked

19 citations

Qiang Wei, Liang‐Chin Huang, Jianfu Li, Yan Hu, Yao-Shun Chuang +11 more

GENEVIC: GENetic data Exploration and Visualization via Intelligent interactive Console

Bioinformatics(2024)10.1093/bioinformatics/btae500

N/A

0DataRank · unranked

6 citations

Savannah Mwesigwa, Yulin Dai, Xiaoqian Jiang, Zhongming Zhao, Anindita Nath

Generative Pre-trained Transformer for Pediatric Stroke Research: A Pilot Study

Pediatric Neurology(2024)10.1016/j.pediatrneurol.2024.07.001

N/A

0DataRank · unranked

5 citations

Kai Zhang, Tia Lal, Xiaoqian Jiang, Stuart Fraser, A Fiedler

FedGMMAT: Federated generalized linear mixed model association tests

PLoS Computational Biology(2024)10.1371/journal.pcbi.1012142

N/A

0DataRank · unranked

8 citations

Han Chen, Xiaoqian Jiang, Arif Harmanci, Wentao Li

Deep learning to predict rapid progression of Alzheimer’s disease from pooled clinical trials: A retrospective study

PLOS Digital Health(2024)10.1371/journal.pdig.0000479

N/A

0DataRank · unranked

6 citations

Madison Shyer, Kristofer Harris, Dulin Wang, Yu‐Chun Hsu, Christine Farrell +10 more

Disentangling Accelerated Cognitive Decline from the Normal Aging Process and Unraveling Its Genetic Components: A Neuroimaging-Based Deep Learning Approach

Journal of Alzheimer s Disease(2024)10.3233/jad-231020

N/A

0DataRank · unranked

5 citations

Yu-Chun Hsu, Brisa S. Fernandes, Kai Zhang, Xiaoyang Li, Nitesh Enduru +6 more

SAFER: sub-hypergraph attention-based neural network for predicting effective responses to dose combinations

BMC Bioinformatics(2024)10.1186/s12859-024-05873-9

N/A

0DataRank · unranked

4 citations

Rongbin Li, Jing Tang, W. Jim Zheng, Xiaoqian Jiang, Yi-Ching Tang

Age-associated proteins explain the role of medial temporal lobe networks in Alzheimer’s disease

GeroScience(2024)10.1007/s11357-024-01291-0

N/A

0DataRank · unranked

1 citations

Yejin Kim, Kai Zhang, Xiaoqian Jiang, Zihuai He, Victor W. Henderson +2 more

Federated Multiple Imputation for Variables that Are Missing Not At Random in Distributed Electronic Health Records

medRxiv(2024)10.1101/2024.09.15.24313479

N/A

0DataRank · unranked

2 citations

Xiaoqian Jiang, Qi Long, Yi Lian

Simulate Scientific Reasoning with Multiple Large Language Models: An Application to Alzheimer’s Disease Combinatorial Therapy

medRxiv(2024)10.1101/2024.12.10.24318800

N/A

0DataRank · unranked

2 citations

Xiaozhong Liu, Xiaoqian Jiang, Yejin Kim, Qidi Xu

De-identification is not always enough

arXiv (Cornell University)(2024)10.48550/arxiv.2402.00179

N/A

0DataRank · unranked

1 citations

Yao-Shun Chuang, Noman Mohammed, Xiaoqian Jiang, Atiquer Rahman Sarkar

SAFER: sub-hypergraph attention-based neural network for predicting effective responses to dose combinations

Research Square(2024)10.21203/rs.3.rs-4308618/v1

N/A

0DataRank · unranked

1 citations

Rongbin Li, Jing Tang, W. Jim Zheng, Xiaoqian Jiang, yiching tang

Ethical sourcing in the context of health data supply chain management: a value sensitive design approach

JAMIA Open(2025)10.1093/jamiaopen/ooaf101

N/A

0DataRank · unranked

6 citations

Jean‐Christophe Bélisle‐Pipon, Benjamin Collins, Ashley Cordes, Kadija Ferryman, Brian McInnis +17 more

A pioneering artificial intelligence tool to predict treatment outcomes in ovarian cancer via diagnostic laparoscopy

Scientific Reports(2025)10.1038/s41598-025-98434-w

N/A

0DataRank · unranked

9 citations

Yu‐Chun Hsu, Amma Asare, Kai Zhang, Deanna Glassman, Katelyn F. Handley +10 more

Multi agent large language models for biomedical hypothesis generation in drug combination discovery

iScience(2025)10.1016/j.isci.2025.113984

N/A

0DataRank · unranked

3 citations

Claudio Soto, Mohammad Shahnawaz, Xiaozhong Liu, Xiaoqian Jiang, Yejin Kim +1 more

Privacy-Preserving Verification of ML Preprocessing via Model Behavior Indicators

IEEE Transactions on Privacy(2025)10.1109/tp.2025.3628998

N/A

0DataRank · unranked

2 citations

Anisa Halimi, Jaideep Vaidya, Xiaoqian Jiang, Erman Ayday, Wenbiao Li

CDEMapper: enhancing National Institutes of Health common data element use with large language models

Journal of the American Medical Informatics Association(2025)10.1093/jamia/ocaf064

N/A

0DataRank · unranked

3 citations

Jimin Huang, Huan He, Vincent Zhang, Yujia Zhou, Xubing Hao +11 more

iGTP: learning interpretable cellular embedding for inferring biological mechanisms underlying single-cell transcriptomics

Briefings in Bioinformatics(2025)10.1093/bib/bbaf296

N/A

0DataRank · unranked

1 citations

Kai Zhang, Yan Chu, Lishan Yu, Xiaoyang Li, Na Hu +8 more

BrainGeneBot: a framework for variant prioritization and generative pretrained transformer-informed interpretation across polygenic risk score studies

Briefings in Bioinformatics(2025)10.1093/bib/bbaf565

N/A

0DataRank · unranked

1 citations

Nitesh Enduru, Xinyi Liu, Xiaoqian Jiang, Zhongming Zhao, Gang Qu

HeteroRepur: Efficient Modeling of Heterogeneous Disease Graph for Depression Drug Repurposing using Heterogeneous Graph Neural Networks

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2024.12.18.629087

N/A

0DataRank · unranked

0 citations

Tongtong Huang, Kai Zhang, Xiaoqian Jiang, Yejin Kim, Ko‐Hong Lin

D3MI: an efficient and powerful federated imputation method for bias reduction in the analysis of distributed incomplete data by accounting for within-site correlation and between-site heterogeneity

medRxiv(2025)10.1101/2025.05.08.25327224

N/A

0DataRank · unranked

0 citations

Xiaoqian Jiang, Qi Long, Yi Lian

Deep representation learning of patient data from Electronic Health Records (EHR): A systematic review

Journal of Biomedical Informatics(2020)10.1016/j.jbi.2020.103671

N/A

0DataRank · unranked

241 citations

Jingcheng Du, Li Zhao, Xiaoqian Jiang, Timothy A. Miller, Fei Wang +3 more

Anticancer drug synergy prediction in understudied tissues using transfer learning

Journal of the American Medical Informatics Association(2020)10.1093/jamia/ocaa212

N/A

0DataRank · unranked

96 citations

Shuyu Zheng, Jing Tang, Wenjin Zheng, Zhao Li, Xiaoqian Jiang +1 more

VERTICOX: Vertically Distributed Cox Proportional Hazards Model Using the Alternating Direction Method of Multipliers

IEEE Transactions on Knowledge and Data Engineering(2020)10.1109/tkde.2020.2989301

N/A

0DataRank · unranked

32 citations

Xiaoqian Jiang, Luca Bonomi, Yong Li, Hongkai Xiong, Lucila Ohno‐Machado +1 more

Model-Protected Multi-Task Learning

IEEE Transactions on Pattern Analysis and Machine Intelligence(2020)10.1109/tpami.2020.3015859

N/A

0DataRank · unranked

16 citations

Ziqi Liu, Jiayu Zhou, Xiaoqian Jiang, Changshui Zhang, Fei Wang +1 more

Noise-tolerant similarity search in temporal medical data

Journal of Biomedical Informatics(2020)10.1016/j.jbi.2020.103667

N/A

0DataRank · unranked

7 citations

Liyue Fan, Xiaoqian Jiang, Luca Bonomi

Ultra-Fast Homomorphic Encryption Models enable Secure Outsourcing of Genotype Imputation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.02.183459

N/A

0DataRank · unranked

20 citations

Arif Harmanci, Jean-Philippe Bossuat, Sergiu Carpov, Jung Hee Cheon, Ilaria Chillotti +16 more

Towards Training Robust Private Aggregation of Teacher Ensembles Under Noisy Labels

(2020)10.1109/bigdata50022.2020.9378234

N/A

0DataRank · unranked

8 citations

Jing Ma, Jian Lou, Li Xiong, Xiaoqian Jiang, Qiuchen Zhang

Privacy-Protecting, Reliable Response Data Discovery Using COVID-19 Patient Observations

medRxiv(2020)10.1101/2020.09.21.20196220

N/A

0DataRank · unranked

3 citations

Larissa Neumann, Paulina Paul, Michael Aratow, Douglas S. Bell, Jason N. Doctor +12 more

Use of the deep learning approach to measure alveolar bone level

Journal Of Clinical Periodontology(2021)10.1111/jcpe.13574

N/A

0DataRank · unranked

149 citations

Tanjida Kabir, Jiman Nelson, Sally Sheng, Hsiu‐Wan Meng, Thomas E. Van Dyke +4 more

Are synthetic clinical notes useful for real natural language processing tasks: A case study on clinical entity recognition

Journal of the American Medical Informatics Association(2021)10.1093/jamia/ocab112

N/A

0DataRank · unranked

54 citations

Yujia Zhou, Xiaoqian Jiang, Karthik Natarajan, Serguei Pakhomov, Hongfang Liu +2 more

Contact Tracing Apps: Lessons Learned on Privacy, Autonomy, and the Need for Detailed and Thoughtful Implementation

JMIR Medical Informatics(2021)10.2196/27449

N/A

0DataRank · unranked

41 citations

Briana Macedo, Venkata Macha, Arko Barman, Xiaoqian Jiang, Katie Hogan

Computational medication regimen for Parkinson’s disease using reinforcement learning

Scientific Reports(2021)10.1038/s41598-021-88619-4

N/A

0DataRank · unranked

28 citations

Jessika Suescun, Mya C. Schiess, Xiaoqian Jiang, Yejin Kim

Differentially Private Medical Texts Generation Using Generative Neural Networks

ACM Transactions on Computing for Healthcare(2021)10.1145/3469035

N/A

0DataRank · unranked

17 citations

Tanbir Ahmed, Tasnia Faequa, Xiaoqian Jiang, Yiyu Yao, Noman Mohammed +1 more

Genome-Wide Allele-Specific Expression in Obligately AsexualDaphnia pulexand the Implications for the Genetic Basis of Asexuality

Genome Biology and Evolution(2021)10.1093/gbe/evab243

N/A

0DataRank · unranked

16 citations

Xiaoqian Jiang, Michael E. Pfrender, Michael Lynch, Zhiqiang Ye

Calibrating predictive model estimates in a distributed network of patient data

Journal of Biomedical Informatics(2021)10.1016/j.jbi.2021.103758

N/A

0DataRank · unranked

9 citations

Xiaoqian Jiang, Rodney A. Gabriel, Lucila Ohno‐Machado, Yingxiang Huang

Hyperpolarized Magnetic Resonance and Artificial Intelligence: Frontiers of Imaging in Pancreatic Cancer

JMIR Medical Informatics(2021)10.2196/26601

N/A

0DataRank · unranked

18 citations

Yan Chu, Shivanand Pudakalakatti, Kang‐Lin Hsieh, Duncan Salmon, Prasanta Dutta +12 more

Privacy-preserving string search on encrypted genomic data using a generalized suffix tree

Informatics in Medicine Unlocked(2021)10.1016/j.imu.2021.100525

N/A

0DataRank · unranked

17 citations

Md Momin Al Aziz, Noman Mohammed, Xiaoqian Jiang, Md Safiur Rahman Mahdi

Efficient verification for outsourced genome-wide association studies

Journal of Biomedical Informatics(2021)10.1016/j.jbi.2021.103714

N/A

0DataRank · unranked

9 citations

Xiaoqian Jiang, Jaideep Vaidya, Xinyue Wang

Drug target ranking for glioblastoma multiforme

BMC Biomedical Engineering(2021)10.1186/s42490-021-00052-w

N/A

0DataRank · unranked

6 citations

Shaghayegh Agah, Aniruddha Datta, Xiaoqian Jiang, Radhika Saraf

Synthesize Heterogeneous Biological Knowledge via Representation Learning for Alzheimer’s Disease Drug Repurposing

medRxiv(2021)10.1101/2021.12.03.21267235

N/A

0DataRank · unranked

3 citations

Germán Plascencia‐Villa, Ko‐Hong Lin, George Perry, Xiaoqian Jiang, Yejin Kim +1 more

SHiMMer: Privacy-Aware Alignment of Genomic Sequences with Secure and Efficient Hidden Markov Model Evaluation

Research Square(2021)10.21203/rs.3.rs-954109/v1

N/A

0DataRank · unranked

2 citations

Yongsoo Song, Xiaoqian Jiang, Arif Harmanci, Miran Kim

Risk of Alzheimer’s Disease Following Influenza Vaccination: A Claims-Based Cohort Study Using Propensity Score Matching

Journal of Alzheimer s Disease(2022)10.3233/jad-220361

N/A

0DataRank · unranked

97 citations

Yaobin Ling, Omar Hasan, Xiaoqian Jiang, Yejin Kim, Kamal N. Phelps +7 more

A multitask deep learning approach for pulmonary embolism detection and identification

Scientific Reports(2022)10.1038/s41598-022-16976-9

N/A

0DataRank · unranked

62 citations

Emma Ferguson, Xiaoqian Jiang, Sean I. Savitz, Shayan Shams, Xiaotian Ma

Secure human action recognition by encrypted neural network inference

Nature Communications(2022)10.1038/s41467-022-32168-5

N/A

0DataRank · unranked

46 citations

Xiaoqian Jiang, Kristin Lauter, Elkhan Ismayilzada, Shayan Shams, Miran Kim

Relational graph convolutional networks for predicting blood–brain barrier penetration of drug molecules

Bioinformatics(2022)10.1093/bioinformatics/btac211

N/A

0DataRank · unranked

29 citations

Xiaoqian Jiang, Yejin Kim, Yan Ding

The evolving privacy and security concerns for genomic data analysis and sharing as observed from the iDASH competition

Journal of the American Medical Informatics Association(2022)10.1093/jamia/ocac165

N/A

0DataRank · unranked

28 citations

Xiaoqian Jiang, Haixu Tang, XiaoFeng Wang, Arif Harmanci, Miran Kim +8 more

A multi-task Gaussian process self-attention neural network for real-time prediction of the need for mechanical ventilators in COVID-19 patients

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104079

N/A

0DataRank · unranked

27 citations

Siddharth Karanth, Bela Patel, Robert L. Murphy, Xiaoqian Jiang, Kai Zhang

Factors Associated With COVID-19 Death in the United States: Cohort Study

JMIR Public Health and Surveillance(2022)10.2196/29343

N/A

0DataRank · unranked

26 citations

Hua Xu, Trudy Millard Krause, Raymond Greenberg, Dong Xiao, Xiaoqian Jiang +1 more

Generalized genomic data sharing for differentially private federated learning

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104113

N/A

0DataRank · unranked

24 citations

Md. Monowar Anjum, Noman Mohammed, Xiaoqian Jiang, Md Momin Al Aziz

Synthesize heterogeneous biological knowledge via representation learning for Alzheimer’s disease drug repurposing

iScience(2022)10.1016/j.isci.2022.105678

N/A

0DataRank · unranked

20 citations

Germán Plascencia‐Villa, Ko‐Hong Lin, George Perry, Xiaoqian Jiang, Yejin Kim +1 more

Toward a standard formal semantic representation of the model card report

BMC Bioinformatics(2022)10.1186/s12859-022-04797-6

N/A

0DataRank · unranked

18 citations

Licong Cui, Degui Zhi, Kirk Roberts, Xiaoqian Jiang, Fang Li +3 more

Scalable Causal Structure Learning: Scoping Review of Traditional and Deep Learning Algorithms and New Opportunities in Biomedicine

JMIR Medical Informatics(2022)10.2196/38266

N/A

0DataRank · unranked

18 citations

Kai Zhang, Can Li, Xiaoqian Jiang, Yejin Kim, Pulakesh Upadhyaya

Federated Learning Algorithms for Generalized Mixed-effects Model (GLMM) on Horizontally Partitioned Data from Distributed Sources

Research Square(2022)10.21203/rs.3.rs-1743146/v1

N/A

0DataRank · unranked

2 citations

Jiayi Tong, Md. Monowar Anjum, Noman Mohammed, Yong Chen, Xiaoqian Jiang +1 more

IMI-CDE: an interactive interface for collaborative mapping of study variables to common data elements

2022 IEEE 10th International Conference on Healthcare Informatics (ICHI)(2022)10.1109/ichi54592.2022.00070

N/A

0DataRank · unranked

1 citations

Wei-Chun Chou, Jianfu Li, Jingcheng Du, Pritham Ram, Rashmie Abeysinghe +6 more

Multi-Task Graph Neural Network For Alzheimer’s Disease Drug Repurposing Using Knowledge Graph And Multi-Level Evidence

Research Square(2022)10.21203/rs.3.rs-1261984/v1

N/A

0DataRank · unranked

0 citations

Germán Plascencia‐Villa, Ko‐Hong Lin, George Perry, Xiaoqian Jiang, Yejin Kim +1 more

Xiaoqian Jiang

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