🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Marina Haukness

University of California, Santa Cruz

ORCID: 0000-0001-9991-8089

Also affiliated with University of Washington

Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
19.2Author DataRank

Indexed papers

8in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 8 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x
Top 4%
5.1DataRank
Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Papers

Driven by 12 papers — median percentile 88. Top paper: “Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes”.

Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes

Nature Biotechnology(2020)10.1038/s41587-020-0503-6
N/A
12.8DataRank · unranked
655 citations

Trevor Pesout, Ryan Lorig-Roach, Marina Haukness, Hugh E. Olsen, Colleen M. Bosworth +27 more

A draft human pangenome reference

Nature(2023)10.1038/s41586-023-05896-x
Top 4%
5.1DataRank
Top 4%1169 citations

Mobin Asri, Jana Ebler, Daniel Doerr, Marina Haukness, Hickey, Glenn +95 more

Complete genomic and epigenetic maps of human centromeres

Science(2022)10.1126/science.abl4178
Top 4%
5.0DataRank
Top 4%637 citations

Glennis A. Logsdon, Andrey V. Bzikadze, Pragya Sidhwani, Sasha A. Langley, Gina V. Caldas +54 more

Pangenome graph construction from genome alignments with Minigraph-Cactus

Nature Biotechnology(2023)10.1038/s41587-023-01793-w
N/A
5.0DataRank · unranked
318 citations

Jean Monlong, Jana Ebler, Adam M. Novak, Jordan M. Eizenga, Yan Gao +94 more

Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility

Science(2020)10.1126/science.abc6617
Top 6%
3.6DataRank
Top 6%201 citations

R. Alan Harris, Marina Haukness, Ian T. Fiddes, Shwetha C. Murali, Jason D. Fernandes +55 more

A high-quality bonobo genome refines the analysis of hominid evolution

Nature(2021)10.1038/s41586-021-03519-x
Top 10%
2.1DataRank
Top 10%92 citations

Claudia Rita Catacchio, LaDeana Hillier, David Porubsky, Ruiyang Li, Arvis Sulovari +34 more

Structurally divergent and recurrently mutated regions of primate genomes

Cell(2024)10.1016/j.cell.2024.01.052
Top 15%
1.4DataRank
Top 15%72 citations

William T. Harvey, David Porubsky, Katherine M. Munson, Kendra Hoekzema, Alexandra P. Lewis +29 more

Complete genomic and epigenetic maps of human centromeres

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.12.452052
Top 22%
0.911DataRank
Top 22%17 citations

Glennis A. Logsdon, Andrey V. Bzikadze, Pragya Sidhwani, Sasha A. Langley, Gina V. Caldas +53 more

Fully phased human genome assembly without parental data using single-cell strand sequencing and long reads

Nature Biotechnology(2020)10.1038/s41587-020-0719-5
N/A
0.815DataRank · unranked
228 citations

Peter Ebert, Peter A. Audano, Mitchell R. Vollger, William T. Harvey, Pierre Marijon +16 more

Structurally divergent and recurrently mutated regions of primate genomes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.07.531415
Top 32%
0.624DataRank
Top 32%14 citations

William T. Harvey, David Porubsky, Katherine M. Munson, Kendra Hoekzema, Alexandra P. Lewis +22 more

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

Cell Reports Methods(2023)10.1016/j.crmeth.2023.100543
Top 50%
0.352DataRank
Top 50%6 citations

Stephanie Greer, Dmitri S. Pavlichin, Bo Zhou, Alexander E. Urban, Tsachy Weissman +94 more

Whole-genome sequence and assembly of the Javan gibbon (Hylobates moloch)

Journal of Heredity(2022)10.1093/jhered/esac043
N/A
0DataRank · unranked
6 citations

Jake VanCampen, Nicholas Maurer, Marina Haukness, Mariam Okhovat, Robert S. Harris +9 more