Daoud Meerzaman

Also affiliated with National Cancer Institute

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

6.2Author DataRank

Indexed papers

7in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00993-6

Top 8%

2.7DataRank

Top 8%153 citations

Bin Zhu, Yongmei Zhao, Wanqiu Chen, Zhaowei Yang, Liz Kerrigan +88 more

Papers

Driven by 45 papers — median percentile 67. Top paper: “Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing”.

Establishing community reference samples, data and call sets for benchmarking cancer mutation detection using whole-genome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00993-6

Top 8%

2.7DataRank

Top 8%153 citations

Bin Zhu, Yongmei Zhao, Wanqiu Chen, Zhaowei Yang, Liz Kerrigan +88 more

Whole genome and exome sequencing reference datasets from a multi-center and cross-platform benchmark study

Scientific Data(2021)10.1038/s41597-021-01077-5

Top 12%

1.7DataRank

Top 12%60 citations

Li Tai Fang, Tsai-Wei Shen, Sulbha Choudhari, Keyur Talsania, Xiongfong Chen +33 more

Cross-Site Concordance Evaluation of Tumor DNA and RNA Sequencing Platforms for the CIMAC-CIDC Network

Clinical Cancer Research(2020)10.1158/1078-0432.ccr-20-3251

Top 32%

0.613DataRank

Top 32%15 citations

Jingxin Fu, Carrie Cibulskis, Aashna Jhaveri, Curtis Gumbs, Biswajit Das +41 more

Whole Genome and Exome Sequencing Reference Datasets from A Multi-center and Cross-platform Benchmark Study

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.27.433136

Top 33%

0.603DataRank

Top 33%10 citations

Li Tai Fang, Tsai-Wei Shen, Sulbha Choudhari, Keyur Talsania, Xiongfong Chen +31 more

NCI Cancer Research Data Commons: Lessons Learned and Future State

Cancer Research(2024)10.1158/0008-5472.can-23-2730

Top 37%

0.520DataRank

Top 37%17 citations

Tanja M. Davidsen, Brandi N. Davis‐Dusenbery, Alexander Baumann, Angela Maggio, Zhaoyi Chen +10 more

Cellular fate of a plant virus immunotherapy candidate

Communications Biology(2024)10.1038/s42003-024-06982-0

N/A

0.481DataRank · unranked

19 citations

Jessica Fernanda Affonso de Oliveira, Lucas Sutorus, Sweta Karan, Zhongchao Zhao, Barry W. Neun +9 more

Ten challenges and opportunities in computational immuno-oncology

Journal for ImmunoTherapy of Cancer(2024)10.1136/jitc-2024-009721

N/A

0.471DataRank · unranked

11 citations

Alan D. Hutson, Mohammadhadi Khorrami, Vanessa D. Jönsson, Spencer R. Rosario, Jill S. Barnholtz‐Sloan +21 more

Analysis of cancer cell line and tissue RNA sequencing data reveals an essential and dark matrisome

Matrix Biology Plus(2024)10.1016/j.mbplus.2024.100156

Top 78%

0.104DataRank

Top 78%1 citations

Yu Fan, Qingrong Chen, Daoud Meerzaman, William G. Stetler‐Stevenson, David Peeney +1 more

Internal checkpoint regulates T cell neoantigen reactivity and susceptibility to PD1 blockade

Med(2022)10.1016/j.medj.2022.07.008

N/A

0DataRank · unranked

77 citations

Beau R. Webber, Yogin Patel, Matthew J. Johnson, Christine M. Kariya, Walker S. Lahr +33 more

Proteogenomic analysis of lung adenocarcinoma reveals tumor heterogeneity, survival determinants, and therapeutically relevant pathways

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100819

N/A

0DataRank · unranked

76 citations

Nicholas W. Bateman, Jianfang Liu, Trinh Mai Nguyen, Teri J. Franks, Xijun Zhang +42 more

Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies

Genome biology(2022)10.1186/s13059-022-02816-6

N/A

0DataRank · unranked

46 citations

Tsai-Wei Shen, Xiongfong Chen, Erich Jaeger, Zhipan Li, Zhong Chen +34 more

Mitochondrial Matrix Protease ClpP Agonists Inhibit Cancer Stem Cell Function in Breast Cancer Cells by Disrupting Mitochondrial Homeostasis

Cancer Research Communications(2022)10.1158/2767-9764.crc-22-0142

N/A

0DataRank · unranked

31 citations

Lídia Hernandez, Emily M.J. Fennell, Manjari Kundu, Donna Voeller, Raj Chari +12 more

Flotillin-2 regulates epidermal growth factor receptor activation, degradation by Cbl-mediated ubiquitination, and cancer growth

Journal of Biological Chemistry(2022)10.1016/j.jbc.2022.102766

N/A

0DataRank · unranked

8 citations

Mariya Liyasova, Soumya Korrapati, Xu Zhang, Shashikala Ratnayake, Qingrong Chen +9 more

Evidence for the digital programming of cellular differentiation: characterization of binary switches in lineage-determining transcription factors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.22.497234

N/A

0DataRank · unranked

0 citations

Md Ahasanur Rahman, Paul W. Wright, Jennie J. Cao, Shashikala Ratnayake, Qingrong Chen +5 more

Cohesin regulates alternative splicing

Science Advances(2023)10.1126/sciadv.ade3876

N/A

0DataRank · unranked

25 citations

Qingrong Chen, Cu Nguyen, Daoud Meerzaman, Dinah S. Singer, Amit Kumar Singh

Whole organism profiling of the Timp gene family

Matrix Biology Plus(2023)10.1016/j.mbplus.2023.100132

N/A

0DataRank · unranked

13 citations

Fan Yu, Sadeechya Gurung, Carolyn Lazaroff, Shashikala Ratnayake, Andrew Warner +4 more

Glioblastoma survival is associated with distinct proteomic alteration signatures post chemoirradiation in a large-scale proteomic panel

Frontiers in Oncology(2023)10.3389/fonc.2023.1127645

N/A

0DataRank · unranked

11 citations

Michael Sierk, Trinh Nguyen, Qingrong Chen, Chunhua Yan, Ying Hu +9 more

Abundant binary promoter switches in lineage-determining transcription factors indicate a digital component of cell fate determination

Cell Reports(2023)10.1016/j.celrep.2023.113454

N/A

0DataRank · unranked

4 citations

Md Ahasanur Rahman, Michael Ruesch, Caprice D. Eisele, Erik Anderson, Paul W. Wright +9 more

Multi-omics Pathways Workflow (MOPAW): An Automated Multi-omics Workflow on the Cancer Genomics Cloud

Cancer Informatics(2023)10.1177/11769351231180992

N/A

0DataRank · unranked

2 citations

Xiaopeng Bian, David A. Roberson, Rakesh Khanna, Qingrong Chen, Chunhua Yan +4 more

Timp2 loss-of-function mutation and TIMP2 treatment in murine model of NSCLC: modulation of immunosuppression and oncogenic signaling

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.29.573636

N/A

0DataRank · unranked

3 citations

Sarvesh Kumar, Tej Pratap Singh, Yueqin Liu, Sandra Jensen, Anandã Chowdhury +7 more

Supplementary Table S2 from Mitochondrial Matrix Protease ClpP Agonists Inhibit Cancer Stem Cell Function in Breast Cancer Cells by Disrupting Mitochondrial Homeostasis

(2023)10.1158/2767-9764.22545575

Top 100%

0DataRank

Top 100%0 citations

Lídia Hernandez, Emily M.J. Fennell, Manjari Kundu, Donna Voeller, Raj Chari +12 more

3DVizSNP: a tool for rapidly visualizing missense mutations identified in high throughput experiments in iCn3D

BMC Bioinformatics(2023)10.1186/s12859-023-05370-5

N/A

0DataRank · unranked

0 citations

Shashikala Ratnayake, Manoj M Wagle, Ben Chen, Brian Park, Jiyao Wang +3 more

Evaluation of somatic copy number variation detection by NGS technologies and bioinformatics tools on a hyper-diploid cancer genome

Genome biology(2024)10.1186/s13059-024-03294-8

N/A

0DataRank · unranked

40 citations

Luyao Ren, Cu Nguyen, Francesco Brundu, Lily Zheng, Yongmei Zhao +21 more

Phosphorylation by JNK switches BRD4 functions

Molecular Cell(2024)10.1016/j.molcel.2024.09.030

N/A

0DataRank · unranked

22 citations

Amit Kumar Singh, Jie Mu, Qingrong Chen, Daoud Meerzaman, Dinah S. Singer +1 more

Comparison of Novel Proteomic Expression Profiles for Radiation Exposure in Male and Female C57BL6 Mice

Radiation Research(2024)10.1667/rade-23-00180.1

N/A

0DataRank · unranked

3 citations

Yu Fan, Qian Chen, Daoud Meerzaman, Kevin Camphausen, Mary Sproull

Organ-specific Biodosimetry Modeling Using Proteomic Biomarkers of Radiation Exposure

Radiation Research(2024)10.1667/rade-24-00092.1

N/A

0DataRank · unranked

3 citations

Yu Fan, Qian Chen, Daoud Meerzaman, Kevin Camphausen, Mary Sproull

Nitric oxide inhibits ten-eleven translocation DNA demethylases to regulate 5mC and 5hmC across the genome

Research Square(2024)10.21203/rs.3.rs-4131804/v1

N/A

0DataRank · unranked

3 citations

Marianne B. Palczewski, Hannah Petraitis Kuschman, Brian M. Hoffman, Hao Yang, Sharon A. Glynn +15 more

TRAIL-induced cytokine production via NFKB2 pathway promotes neutrophil chemotaxis and immune suppression in triple negative breast cancers

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.19.604341

N/A

0DataRank · unranked

3 citations

Yoshimi Endo Greer, Alexei Lobanov, Lisa A. Ridnour, Renee N. Donahue, Yeap Ng +11 more

The ESCRT protein CHMP5 promotes T cell leukemia by controlling BRD4-p300-dependent transcription

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.29.577409

N/A

0DataRank · unranked

0 citations

Shashikala Ratnayake, Qianzi Tang, Rui Wang, Ballachanda N. Devaiah, Lan Zhou +5 more

TRAIL induces cytokine production via the NFkB2 pathway promoting neutrophil chemotaxis and neutrophil-mediated immune-suppression in triple negative breast cancer cells

Cancer Letters(2025)10.1016/j.canlet.2025.217692

N/A

0DataRank · unranked

10 citations

Yoshimi Endo Greer, Alexei Lobanov, Lisa A. Ridnour, Renee N. Donahue, Yeap Ng +12 more

Integrin CD103 expression in naive CD8+ T cells promotes cytokine-driven acquisition of memory phenotype and effector function

Immunity(2025)10.1016/j.immuni.2025.08.014

N/A

0DataRank · unranked

9 citations

Davinna L. Ligons, Dominic Lanasa, Hilary R. Keller, Megan A. Luckey, Brian J. Capaldo +4 more

Nitric oxide inhibits ten-eleven translocation DNA demethylases to regulate 5mC and 5hmC across the genome

Nature Communications(2025)10.1038/s41467-025-56928-1

N/A

0DataRank · unranked

12 citations

Hannah Petraitis Kuschman, Brian M. Hoffman, Venkatesan Kathiresan, Hao Yang, Sharon A. Glynn +16 more

Proteogenomic characterization of invasive breast tumors in young women

npj Breast Cancer(2025)10.1038/s41523-025-00793-0

N/A

0DataRank · unranked

3 citations

Jianfang Liu, Anthony R. Soltis, Nicholas W. Bateman, Qingrong Chen, Lori A. Sturtz +70 more

DeepTarget predicts anti-cancer mechanisms of action of small molecules by integrating drug and genetic screens

npj Precision Oncology(2025)10.1038/s41698-025-01111-4

N/A

0DataRank · unranked

2 citations

Neelam Sinha, Marlenne Perales, Adi V Tarrab, Trinh Nguyen, Lihe Liu +16 more

The ESCRT protein CHMP5 promotes T cell leukemia by enabling BRD4-p300-dependent transcription

Nature Communications(2025)10.1038/s41467-025-59504-9

N/A

0DataRank · unranked

2 citations

Shashikala Ratnayake, Qianzi Tang, Rui Wang, Sneha Ghosh Chaudhary, Devaiah N Ballachanda +8 more

Timp2 loss-of-function mutation and TIMP2 treatment in a murine model of NSCLC: Modulation of immunosuppression and oncogenic signaling

Translational Oncology(2025)10.1016/j.tranon.2025.102309

N/A

0DataRank · unranked

0 citations

Sarvesh Kumar, Tej Pratap Singh, Yueqin Liu, Sandra Jensen, Anandã Chowdhury +7 more

A simple liquid 3D cell culture paradigm models oxidative mitochondrial metabolism of epithelial breast cancer cells with relevance for lung metastases

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.24.671623

N/A

0DataRank · unranked

0 citations

Melissa R. Mikolaj, Jonathan M. Weiss, Ronald J. Holewinski, Yu Fan, Xia Xu +13 more

Oncopacket: integration of cancer research data using GA4GH phenopackets

Bioinformatics(2025)10.1093/bioinformatics/btaf546

N/A

0DataRank · unranked

0 citations

Daniel Danis, Sagar Patil, Nobal Kishor, Rajdeep Mondal, Abhishek Jha +7 more

Internal checkpoint regulates T cell neoantigen reactivity and susceptibility to PD1 blockade

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.24.306571

N/A

0DataRank · unranked

15 citations

Beau R. Webber, Yogin Patel, Matthew J. Johnson, Christine M. Kariya, Walker S. Lahr +33 more

Inferring causal molecular networks: empirical assessment through a community-based effort

UNC Libraries(2020)10.17615/j5nb-5n89

N/A

0DataRank · unranked

0 citations

Steven M. Hill, Daoud Meerzaman, Venkateshan Kannan, Bahman Afsari, Takeshi Hase +95 more

Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing

Nature Biotechnology(2021)10.1038/s41587-021-00994-5

N/A

0DataRank · unranked

215 citations

Luyao Ren, Zhong Chen, Li Tai Fang, Yongmei Zhao, Justin Lack +85 more

TNF plays a crucial role in inflammation by signaling via T cell TNFR2

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2109972118

N/A

0DataRank · unranked

102 citations

Shizuka Otsuka, Nathan Wong, Aamna Abbasi, Matthias M. Gaida, Yu Fan +3 more

gcMECM: graph clustering of mutual exclusivity of cancer mutations

BMC Bioinformatics(2021)10.1186/s12859-021-04505-w

N/A

0DataRank · unranked

2 citations

Chunhua Yan, Qingrong Chen, Daoud Meerzaman, Ying Hu

Comprehensive Assessment of Somatic Copy Number Variation Calling Using Next-Generation Sequencing Data

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.18.431906

N/A

0DataRank · unranked

10 citations

Fayaz Seifuddin, Cu Nguyen, Zhaowei Yang, Wanqiu Chen, Chunhua Yan +6 more

Molecular characterization of the highest risk adult patients with acute myeloid leukemia (AML) through multi-omics clustering

Research Square(2021)10.21203/rs.3.rs-138491/v1

N/A

0DataRank · unranked

0 citations

John Pepper, Cu Nguyen, Fan Yu, Ying Hu, Qingrong Chen +3 more

Daoud Meerzaman

Indexed papers

Top data-sharing exemplar

Papers