🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Hoang Van Phan

University of California, San Francisco

ORCID: 0000-0002-0162-4283

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 13 papers. Top paper: “Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology”.

Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology

Science Translational Medicine(2024)10.1126/scitranslmed.adj5154

N/A

0.708DataRank · unranked

25 citations

Alexandra Tsitsiklis, Cole Maguire, Elias K. Haddad, Patrice M. Becker, Seunghee Kim‐Schulze +95 more

Microbial dynamics and pulmonary immune responses in COVID-19 secondary bacterial pneumonia

Nature Communications(2024)10.1038/s41467-024-53566-x

N/A

0.549DataRank · unranked

16 citations

Alexandra Tsitsiklis, Victoria Chu, Hoang Van Phan, Catherine DeVoe, Christina Love +87 more

Physical inactivity exacerbates pathologic inflammatory signalling at the single cell level in patients with systemic lupus

EBioMedicine(2024)10.1016/j.ebiom.2024.105432

N/A

0.312DataRank · unranked

7 citations

Hoang Van Phan, Chun Jimmie Ye, Cristina M. Lanata, Sebastián Cruz-González, Joon‐Suk Park +8 more

Computational prediction of protein interactions on single cells by proximity sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.27.550388

N/A

0DataRank · unranked

1 citations

Hoang Van Phan, Luke Vistain, Mengjie Chen, Aly A. Khan, Savaş Tay +1 more

Computational prediction of protein interactions in single cells by proximity sequencing

PLoS Computational Biology(2024)10.1371/journal.pcbi.1011915

N/A

0DataRank · unranked

3 citations

Hoang Van Phan, Luke Vistain, Mengjie Chen, Aly A. Khan, Savaş Tay +1 more

Host-microbe multiomic profiling identifies distinct COVID-19 immune dysregulation in solid organ transplant recipients

Nature Communications(2025)10.1038/s41467-025-55823-z

N/A

0DataRank · unranked

6 citations

Joanna Schaenman, Hoang Van Phan, Cole Maguire, Alexandra Tsitsiklis, Nadine Rouphael +93 more

Integrating a host biomarker with a large language model for diagnosis of lower respiratory tract infection

Nature Communications(2025)10.1038/s41467-025-66218-5

N/A

0DataRank · unranked

1 citations

Natasha Spottiswoode, Emily Lydon, Victoria Chu, Adolfo Cuesta, Alexander D. Kazberouk +5 more

Epigenetic attenuation of interferon signaling drives aging-related improvements in systemic lupus

medRxiv(2025)10.1101/2025.01.27.25321143

N/A

0DataRank · unranked

0 citations

Hoang Van Phan, Sarah L. Patterson, Ana Laura Almonte Loya, Cristina M. Lanata, Christina Love +19 more

Minimalistic Transcriptomic Signatures Permit Accurate Early Prediction of COVID-19 Mortality

medRxiv(2025)10.1101/2025.05.18.25327658

N/A

0DataRank · unranked

0 citations

Emily Lydon, Hoang Van Phan, Natasha Spottiswoode, Lucile Neyton, Joann Diray‐Arce +34 more

Fixed single-cell RNA sequencing for understanding virus infection and host response

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.17.302232

N/A

0DataRank · unranked

6 citations

Michiel van Gent, Nir Drayman, Anindita Basu, Michaela U. Gack, Savaş Tay +1 more

Empiric Azithromycin in COVID-19 Impacts the Respiratory Microbiome and Antimicrobial Resistome without Anti-inflammatory Benefit

Research Square(2025)10.21203/rs.3.rs-6875205/v1

N/A

0DataRank · unranked

0 citations

Abigail Glascock, Cole Maguire, Hoang Van Phan, Emily Lydon, Carolyn S. Calfee +49 more

Quantification of proteins, protein complexes and mRNA in single cells by proximity-sequencing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.15.098780

N/A

0DataRank · unranked

4 citations

Hoang Van Phan, Christian Jordi, Mengjie Chen, Sai T. Reddy, Savaş Tay +1 more

High-throughput RNA sequencing of paraformaldehyde-fixed single cells

Nature Communications(2021)10.1038/s41467-021-25871-2

N/A

0DataRank · unranked

75 citations

Michiel van Gent, Nir Drayman, Anindita Basu, Michaela U. Gack, Savaş Tay +1 more