Paul Avillach

Biochemistry, Genetics and Molecular BiologyComputer SciencePharmacology, Toxicology and PharmaceuticsHealth Professions

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

13.0Author DataRank

Indexed papers

10in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 10 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Human Phenotype Ontology in 2024: phenotypes around the world

Nucleic Acids Research(2023)10.1093/nar/gkad1005

Top 6%

3.9DataRank

Top 6%387 citations

Nicolas A Matentzoglu, Ben D Coleman, Eunice B Addo-Lartey, Anna V. Anagnostopoulos, Joel Anderton +95 more

Papers

Driven by 40 papers — median percentile 75. Top paper: “FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources”.

FAIRshake: Toolkit to Evaluate the FAIRness of Research Digital Resources

Cell Systems(2019)10.1016/j.cels.2019.09.011

N/A

4.7DataRank · unranked

66 citations

Lily Wang, Alex Jones, Megan L. Wojciechowicz, Denis Torre, Kathleen M. Jagodnik +31 more

The Human Phenotype Ontology in 2024: phenotypes around the world

Nucleic Acids Research(2023)10.1093/nar/gkad1005

Top 6%

3.9DataRank

Top 6%387 citations

Nicolas A Matentzoglu, Ben D Coleman, Eunice B Addo-Lartey, Anna V. Anagnostopoulos, Joel Anderton +95 more

De novo mutations across 1,465 diverse genomes reveal mutational insights and reductions in the Amish founder population

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1902766117

N/A

3.0DataRank · unranked

112 citations

Douglas P. Loesch, James A. Perry, Nancy L. Heard‐Costa, Daniel Taliun, Brian E. Cade +93 more

A multidimensional precision medicine approach identifies an autism subtype characterized by dyslipidemia

Nature Medicine(2020)10.1038/s41591-020-1007-0

N/A

2.5DataRank · unranked

86 citations

Alal Eran, Nathan Palmer, Paul Avillach, Ami Levy‐Moonshine, Peter Szolovits +2 more

The case for open science: rare diseases

JAMIA Open(2020)10.1093/jamiaopen/ooaa030

N/A

2.2DataRank · unranked

63 citations

Peter N. Robinson, William A. Gahl, Paul Avillach, Gareth Baynam, Helene Cederroth +20 more

Long-term kidney function recovery and mortality after COVID-19-associated acute kidney injury: an international multi-centre observational cohort study

EClinicalMedicine(2022)10.1016/j.eclinm.2022.101724

Top 11%

2.0DataRank

Top 11%79 citations

Bryce W. Q. Tan, Amelia L.M. Tan, Emily Schriver, Alba Gutiérrez‐Sacristán, Priyam Das +89 more

Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data

Journal of the American Medical Informatics Association(2021)10.1093/jamia/ocab018

Top 13%

1.6DataRank

Top 13%52 citations

Hossein Estiri, Griffin M. Weber, Bertrand Moal, Paul Avillach, Chuan Hong +36 more

International electronic health record-derived post-acute sequelae profiles of COVID-19 patients

npj Digital Medicine(2022)10.1038/s41746-022-00623-8

Top 13%

1.6DataRank

Top 13%29 citations

Arianna Dagliati, Zahra Shakeri Hossein Abad, Xin Xiong, Clara-Lea Bonzel, Zongqi Xia +53 more

FAIRshake: toolkit to evaluate the findability, accessibility, interoperability, and reusability of research digital resources

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/657676

N/A

1.1DataRank · unranked

9 citations

Lily Wang, Alex Jones, Megan L. Wojciechowicz, Denis Torre, Kathleen M. Jagodnik +30 more

Adverse drug event presentation and tracking (ADEPT): semiautomated, high throughput pharmacovigilance using real-world data

JAMIA Open(2020)10.1093/jamiaopen/ooaa031

Top 24%

0.853DataRank

Top 24%12 citations

Jason Stedman, Shannon Manzi, Chen Lin, Guergana Savova, Paul Avillach +2 more

Characterization of long COVID temporal sub-phenotypes by distributed representation learning from electronic health record data: a cohort study

EClinicalMedicine(2023)10.1016/j.eclinm.2023.102210

Top 27%

0.745DataRank

Top 27%24 citations

Zachary H. Strasser, Zahra Shakeri Hossein Abad, Jeffrey G. Klann, Kavishwar B. Wagholikar, Rebecca Mesa +93 more

Finding commonalities in rare diseases through the undiagnosed diseases network

Journal of the American Medical Informatics Association(2021)10.1093/jamia/ocab050

Top 28%

0.715DataRank

Top 28%8 citations

Alba Gutiérrez‐Sacristán, Vianney Jouhet, Kimberly LeBlanc, Cecilia Esteves, Undiagnosed Diseases Network +8 more

Validation of a Derived International Patient Severity Algorithm to Support COVID-19 Analytics from Electronic Health Record Data

medRxiv(2020)10.1101/2020.10.13.20201855

Top 30%

0.665DataRank

Top 30%12 citations

Griffin M. Weber, Hossein Estiri, Bertrand Moal, Paul Avillach, Chuan Hong +34 more

Distinguishing Admissions Specifically for COVID-19 From Incidental SARS-CoV-2 Admissions: National Retrospective Electronic Health Record Study

Journal of Medical Internet Research(2022)10.2196/37931

N/A

0.609DataRank · unranked

57 citations

Zachary H. Strasser, Meghan R. Hutch, Chris J. Kennedy, Jayson S. Marwaha, Michele Morris +16 more

Multiview Incomplete Knowledge Graph Integration with application to cross-institutional EHR data harmonization

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104147

N/A

0.538DataRank · unranked

35 citations

Ziming Gan, Xu Shi, Alina Patwari, Everett Rush, Clara-Lea Bonzel +17 more

Changes in laboratory value improvement and mortality rates over the course of the pandemic: an international retrospective cohort study of hospitalised patients infected with SARS-CoV-2

BMJ Open(2022)10.1136/bmjopen-2021-057725

Top 38%

0.505DataRank

Top 38%9 citations

Harrison G. Zhang, Sehi L’Yi, Griffin M. Weber, Paul Avillach, Bryce W. Q. Tan +56 more

Long-term Survival after Hematopoietic Cell Transplant for Sickle Cell Disease Compared to the United States Population

Transplantation and Cellular Therapy(2022)10.1016/j.jtct.2022.03.014

N/A

0.434DataRank · unranked

17 citations

Kyle Hebert, Arnaud Serret-Larmande, Vianney Jouhet, Emily Hughes, Jason Stedman +7 more

GenoPheno: cataloging large-scale phenotypic and next-generation sequencing data within human datasets

Briefings in Bioinformatics(2020)10.1093/bib/bbaa033

Top 46%

0.398DataRank

Top 46%7 citations

Carlos De Niz, Cartik R. Kothari, Sek Won Kong, Kenneth D. Mandl, Paul Avillach +1 more

A high-throughput phenotyping algorithm is portable from adult to pediatric populations

Journal of the American Medical Informatics Association(2020)10.1093/jamia/ocaa343

N/A

0.312DataRank · unranked

7 citations

Molei Liu, Vidul Ayakulangara Panickan, Paul Avillach, Tianxi Cai, Kenneth D. Mandl +1 more

International Comparisons of Harmonized Laboratory Value Trajectories to Predict Severe COVID-19: Leveraging the 4CE Collaborative Across 342 Hospitals and 6 Countries: A Retrospective Cohort Study

medRxiv(2020)10.1101/2020.12.16.20247684

N/A

0DataRank · unranked

19 citations

Chuan Hong, Nathan Palmer, Paul Avillach, Shawn N. Murphy, Alba Gutiérrez‐Sacristán +80 more

Experiences implementing scalable, containerized, cloud-based NLP for extracting biobank participant phenotypes at scale

JAMIA Open(2020)10.1093/jamiaopen/ooaa016

N/A

0DataRank · unranked

4 citations

Paul Avillach, Kenneth D. Mandl, Timothy A. Miller

SurvMaximin: Robust federated approach to transporting survival risk prediction models

Journal of Biomedical Informatics(2022)10.1016/j.jbi.2022.104176

N/A

0DataRank · unranked

31 citations

Harrison G. Zhang, Xin Xiong, Chuan Hong, Griffin M. Weber, Gabriel A. Brat +53 more

Validation of a computational phenotype for finding patients eligible for genetic testing for pathogenic PTEN variants across three centers

Journal of Neurodevelopmental Disorders(2022)10.1186/s11689-022-09434-0

N/A

0DataRank · unranked

8 citations

Siddharth Srivastava, Youssef A. Kousa, Rima Izem, Marcin Gierdalski, Dong‐Kyu Kim +11 more

Distinguishing Admissions Specifically for COVID-19 from Incidental SARS-CoV-2 Admissions: A National EHR Research Consortium Study

medRxiv(2022)10.1101/2022.02.10.22270728

N/A

0DataRank · unranked

8 citations

Zachary H. Strasser, Meghan R. Hutch, Chris J. Kennedy, Jayson S. Marwaha, Michele Morris +16 more

SurvMaximin: Robust Federated Approach to Transporting Survival Risk Prediction Models

medRxiv(2022)10.1101/2022.02.03.22270410

N/A

0DataRank · unranked

3 citations

Harrison G. Zhang, Xin Xiong, Chuan Hong, Griffin M. Weber, Gabriel A. Brat +53 more

Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record?

Journal of Biomedical Informatics(2023)10.1016/j.jbi.2023.104306

N/A

0DataRank · unranked

29 citations

Emily Getzen, Meghan R. Hutch, Zachary H. Strasser, Alba Gutiérrez‐Sacristán, Trang T. Le +34 more

Scalability and cost-effectiveness analysis of whole genome-wide association studies on Google Cloud Platform and Amazon Web Services

Journal of the American Medical Informatics Association(2020)10.1093/jamia/ocaa068

N/A

0DataRank · unranked

30 citations

Carlos De Niz, Alba Gutiérrez‐Sacristán, Gabor Korodi, Nneka Ede, Ranjay Kumar +6 more

Building a collaborative cloud platform to accelerate heart, lung, blood, and sleep research

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad048

N/A

0DataRank · unranked

17 citations

Paul Avillach, Rebecca Boyles, Kira Bradford, Steven J. Cox, Brandi N. Davis‐Dusenbery +53 more

Acute respiratory distress syndrome after SARS-CoV-2 infection on young adult population: International observational federated study based on electronic health records through the 4CE consortium

PLoS ONE(2023)10.1371/journal.pone.0266985

N/A

0DataRank · unranked

9 citations

Arthur Orieux, Thomas Ferté, Antoine Neuraz, Gabriel A. Brat, Paul Avillach +35 more

Phenome-wide profiling identifies genotype-phenotype associations in Phelan-McDermid syndrome using family-sourced data from an international registry

Molecular Autism(2024)10.1186/s13229-024-00619-z

N/A

0DataRank · unranked

5 citations

Maxime Wack, Claire Hassen‐Khodja, Michael McDuffie, Geraldine Bliss, Elizabeth J. Horn +8 more

Development and validation of an open-source pipeline for automatic population of case report forms from electronic health records: a pediatric multi-center prospective study

EBioMedicine(2024)10.1016/j.ebiom.2024.105337

N/A

0DataRank · unranked

3 citations

Simran Makwana, Audrey Dionne, Simran Mahanta, Karla J. Dyer, Faridis Serrano +12 more

Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: A multinational cohort study

PLOS Digital Health(2024)10.1371/journal.pdig.0000484

N/A

0DataRank · unranked

3 citations

Jiyeon Son, Trang T. Le, Chuan Hong, Xuan Wang, Zahra Shakeri Hossein Abad +43 more

VarPPUD: Variant post prioritization developed for undiagnosed genetic disorders

medRxiv(2024)10.1101/2024.04.15.24305876

N/A

0DataRank · unranked

0 citations

Alba Gutiérrez‐Sacristán, Undiagnosed Diseases Network, Shilpa N. Kobren, Paul Avillach, Rui Yin

VarPPUD: Pinpointing diagnostic variants from sets of prioritized, strong candidate variants

PLoS Computational Biology(2025)10.1371/journal.pcbi.1013414

N/A

0DataRank · unranked

0 citations

Alba Gutiérrez‐Sacristán, Undiagnosed Diseases Network, Shilpa N. Kobren, Paul Avillach, Rui Yin

International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study

Journal of Medical Internet Research(2021)10.2196/31400

N/A

0DataRank · unranked

24 citations

Harrison G. Zhang, Sehi L’Yi, Clara-Lea Bonzel, Chuan Hong, Paul Avillach +64 more

Impact of COVID-19 non-pharmaceutical interventions on bacterial infections in children: an international electronic health record-based study

BMJ Public Health(2025)10.1136/bmjph-2025-002671

N/A

0DataRank · unranked

0 citations

Alba Gutiérrez‐Sacristán, Simran Makwana, Xiudi Li, Surbhi Bhatnagar, David A. Hanauer +23 more

Multinational characterization of neurological phenotypes in patients hospitalized with COVID-19

Scientific Reports(2021)10.1038/s41598-021-99481-9

N/A

0DataRank · unranked

19 citations

Alba Gutiérrez‐Sacristán, Jiyeon Son, Chuan Hong, Andrew M. South, Brett K. Beaulieu-Jones +95 more

Evolving phenotypes of non-hospitalized patients that indicate long COVID

BMC Medicine(2021)10.1186/s12916-021-02115-0

N/A

0DataRank · unranked

153 citations

Zachary H. Strasser, Gabriel A. Brat, Yevgeniy R. Semenov, James R. Aaron, Giuseppe Agapito +93 more

Multi-PheWAS intersection approach to identify sex differences across comorbidities in 59 140 pediatric patients with autism spectrum disorder

Journal of the American Medical Informatics Association(2021)10.1093/jamia/ocab144

N/A

0DataRank · unranked

5 citations

Carlos Sáez, Carlos De Niz, Niloofar Jalali, Thomas DeSain, Ranjay Kumar +6 more

International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study (Preprint)

(2021)10.2196/preprints.31400

N/A

0DataRank · unranked

1 citations

Harrison G. Zhang, Sehi L’Yi, Clara-Lea Bonzel, Chuan Hong, Paul Avillach +64 more

Paul Avillach

Indexed papers

Top data-sharing exemplar

Papers