🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Joep de Ligt

Ministry of Health

ORCID: 0000-0002-0348-419X

Also affiliated with Hartwig Medical Foundation

MedicineBiochemistry, Genetics and Molecular BiologyMathematics

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
1.9Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes

eLife(2023)10.7554/elife.85867
Top 13%
1.7DataRank
Top 13%113 citations

Zoe A. Dyson, Danielle J. Ingle, Afreenish Amir, Mabel Kamweli Aworh, Marie Anne Chattaway +95 more

Papers

Driven by 9 papers — median percentile 41. Top paper: “Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes”.

Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes

eLife(2023)10.7554/elife.85867
Top 13%
1.7DataRank
Top 13%113 citations

Zoe A. Dyson, Danielle J. Ingle, Afreenish Amir, Mabel Kamweli Aworh, Marie Anne Chattaway +95 more

Toward effective software solutions for big biology

Nature Biotechnology(2015)10.1038/nbt.3240
N/A
0.546DataRank · unranked
37 citations

Joep de Ligt, Artem Tarasov, Ritsert C. Jansen, Edwin Cuppen, Philip E. Bourne +1 more

Global diversity and antimicrobial resistance of typhoid fever pathogens: insights from 13,000 Salmonella Typhi genomes

medRxiv(2022)10.1101/2022.12.28.22283969
Top 59%
0.257DataRank
Top 59%4 citations

Zoe A. Dyson, Danielle J. Ingle, Afreenish Amir, Mabel Kamweli Aworh, Marie Anne Chattaway +95 more

Building pangenome graphs

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.05.535718
N/A
0DataRank · unranked
118 citations

Andrea Guarracino, Simon Heumos, Flavia Villani, Zhigui Bao, Lorenzo Tattini +25 more

Building pangenome graphs

Nature Methods(2024)10.1038/s41592-024-02430-3
N/A
0DataRank · unranked
162 citations

Andrea Guarracino, Simon Heumos, Flavia Villani, Zhigui Bao, Lorenzo Tattini +25 more

Building expertise on FAIR through evolving Bring Your Own Data (BYOD) workshops: describing the data, software, and management-focused approaches and their evolution

Zenodo (CERN European Organization for Nuclear Research)(2023)10.5281/zenodo.8247728
N/A
0DataRank · unranked
0 citations

Lieze Thielemans, Rajaram Kaliyaperumal, Claudio Carta, Shuxin Zhang, Celia W. G. van Gelder +28 more

Creating a biomedical knowledge base by addressing GPT inaccurate responses and benchmarking context

Open Research Africa(2025)10.12688/openresafrica.15854.1
Top 100%
0DataRank
Top 100%0 citations

Rupert W. Overall, Andrea Guarracino, Vicenza Colonna, Flavia Villani, Erik Garrison +21 more

Building Expertise on FAIR Through Evolving Bring Your Own Data (BYOD) Workshops: Describing the Data, Software, and Management-focused Approaches and Their Evolution

Data Intelligence(2024)10.1162/dint_a_00236
N/A
0DataRank · unranked
0 citations

Lieze Thielemans, Rajaram Kaliyaperumal, Claudio Carta, Shuxin Zhang, Nirupama Benis +28 more

Global disparities in SARS-CoV-2 genomic surveillance

Nature Communications(2022)10.1038/s41467-022-33713-y
N/A
0DataRank · unranked
305 citations

Elizaveta Semenova, Gytis Dudas, Gabriel W. Hassler, Chaney C. Kalinich, Moritz U. G. Kraemer +95 more