🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Caitlin Guccione

University of California San Diego

ORCID: 0000-0002-0446-1635

Also affiliated with Natera (United States)

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile
0Author DataRank

Indexed papers

0in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “Challenges in Determining the Role of Microbiome Evolution in Barrett’s Esophagus and Progression to Esophageal Adenocarcinoma”.

Challenges in Determining the Role of Microbiome Evolution in Barrett’s Esophagus and Progression to Esophageal Adenocarcinoma

Microorganisms(2021)10.3390/microorganisms9102003
N/A
0DataRank · unranked
12 citations

Rena Yadlapati, Shailja C. Shah, Rob Knight, Kit Curtius, Caitlin Guccione

Cancer's second genome: Microbial cancer diagnostics and redefining clonal evolution as a multispecies process

BioEssays(2022)10.1002/bies.202100252
N/A
0DataRank · unranked
36 citations

Caitlin Guccione, Lucie Laplane, Thomas Pradeu, Kit Curtius, Rob Knight +1 more

AI-assisted discovery of an ethnicity-influenced driver of cell transformation in esophageal and gastroesophageal junction adenocarcinomas

JCI Insight(2022)10.1172/jci.insight.161334
N/A
0DataRank · unranked
16 citations

Vinicius J. Campos, Daniella Vo, Caitlin Guccione, Vanae Goheen-Holland, Courtney Tindle +10 more

AI-assisted Discovery of an Ethnicity-influenced Driver of Cell Transformation in Esophageal and Gastroesophageal Junction Adenocarcinomas

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.30.478408
N/A
0DataRank · unranked
1 citations

Vinicius J. Campos, Daniella Vo, Caitlin Guccione, Vanae Goheen-Holland, Courtney Tindle +10 more

Circular extrachromosomal DNA promotes tumor heterogeneity in high-risk medulloblastoma

Nature Genetics(2023)10.1038/s41588-023-01551-3
N/A
0DataRank · unranked
66 citations

Jens Luebeck, Sunita Sridhar, Ivy Tsz-Lo Wong, Deobrat Dixit, Shanqing Wang +43 more

BIRDMAn: A Bayesian differential abundance framework that enables robust inference of host-microbe associations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.30.526328
N/A
0DataRank · unranked
17 citations

James T. Morton, Cameron Martino, Gregory D. Sepich‐Poore, Celeste Allaband, Caitlin Guccione +5 more

Robustness of cancer microbiome signals over a broad range of methodological variation

Oncogene(2024)10.1038/s41388-024-02974-w
N/A
0DataRank · unranked
64 citations

Daniel McDonald, Evguenia Kopylova, Caitlin Guccione, Qiyun Zhu, George I. Austin +16 more

Incomplete human reference genomes can drive false sex biases and expose patient-identifying information in metagenomic data

Research Square(2024)10.21203/rs.3.rs-4721159/v1
N/A
0DataRank · unranked
1 citations

Caitlin Guccione, Lucas Patel, Yoshihiko Tomofuji, Daniel McDonald, Antonio González +13 more

Incomplete human reference genomes can drive false sex biases and expose patient-identifying information in metagenomic data

Nature Communications(2025)10.1038/s41467-025-56077-5
N/A
0DataRank · unranked
24 citations

Lucas Patel, Yoshihiko Tomofuji, Daniel McDonald, Antonio González, Gregory D. Sepich‐Poore +14 more

Calculating fast differential genome coverages among metagenomic sources using micov

Communications Biology(2025)10.1038/s42003-025-09007-6
N/A
0DataRank · unranked
5 citations

Caitlin Guccione, Daniel McDonald, Renee Oles, Suzanne Devkota, Evguenia Kopylova +10 more

ChIP provides 10-fold microbial DNA enrichment from tissue while minimizing bias

Molecular Biology Reports(2025)10.1007/s11033-025-10330-8
N/A
0DataRank · unranked
4 citations

Jon G. Sanders, Se Jin Song, Sydney Lavoie, Austin D. Swafford, Caitlin Guccione +6 more

Community assembly modeling of microbial evolution within Barrett’s esophagus and esophageal adenocarcinoma

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.14.633020
N/A
0DataRank · unranked
1 citations

I. Sfiligoi, Antonio González, Justin P. Shaffer, Mariya Kazachkova, Yuhan Weng +9 more