Ronald G. Collman

Also affiliated with Fred Hutch Cancer Center, University of Pennsylvania, Philadelphia University

Immunology and MicrobiologyMedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 46 papers. Top paper: “Functional Analysis of HIV-1 Vpr: Identification of Determinants Essential for Subcellular Localization”.

Functional Analysis of HIV-1 Vpr: Identification of Determinants Essential for Subcellular Localization

Virology(1995)10.1006/viro.1995.1490

N/A

3.5DataRank · unranked

73 citations

Ronald G. Collman, Mamata Patel, Claude E. Monken, A. Srinivasan, S. Mahalingam

Transcriptomics of bronchoalveolar lavage cells identifies new molecular endotypes of sarcoidosis

European Respiratory Journal(2021)10.1183/13993003.02950-2020

N/A

1.2DataRank · unranked

58 citations

Xiting Yan, Kevin F. Gibson, Mridu Gulati, Jonas C. Schupp, Giuseppe DeIuliis +24 more

Comparison of SARS-CoV-2 variants of concern in primary human nasal cultures demonstrates Delta as most cytopathic and Omicron as fastest replicating

mBio(2024)10.1128/mbio.03129-23

N/A

1.2DataRank · unranked

47 citations

Anant K. Patel, Li Tan, Andrew D. Marques, Ranawaka A. P. M. Perera, Scott Sherrill-Mix +9 more

HIV-induced RSAD2/Viperin supports sustained infection of monocyte-derived macrophages

Journal of Virology(2024)10.1128/jvi.00863-24

N/A

0.366DataRank · unranked

9 citations

Yanjie Yi, Fang Lu, Olga Vladimirova, Bhanu Chandra Karisetty, Jayamanna Wikramasinghe +4 more

Gene coexpression networks reveal novel molecular endotypes in alpha-1 antitrypsin deficiency

Thorax(2020)10.1136/thoraxjnl-2019-214301

N/A

0.345DataRank · unranked

9 citations

Wenlan Zang, Milica Vukmirovic, Xiting Yan, Taylor Adams, Giuseppe DeIuliis +20 more

Heightened resistance to host type 1 interferons characterizes HIV-1 at transmission and after antiretroviral therapy interruption

Science Translational Medicine(2021)10.1126/scitranslmed.abd8179

N/A

0DataRank · unranked

84 citations

Scott Sherrill-Mix, Frédéric Bibollet‐Ruche, Ronnie M. Russell, Stephanie Trimboli, Andrew G. Smith +29 more

Debulking SARS-CoV-2 in saliva using angiotensin converting enzyme 2 in chewing gum to decrease oral virus transmission and infection

Molecular Therapy(2021)10.1016/j.ymthe.2021.11.008

N/A

0DataRank · unranked

69 citations

Smruti K. Nair, Nardana Esmaeili, Geetanjali Wakade, Naila Shahid, Prem Kumar Ganesan +21 more

Single- and Two-Stage, Closed-Tube, Point-of-Care, Molecular Detection of SARS-CoV-2

Analytical Chemistry(2021)10.1021/acs.analchem.1c03016

N/A

0DataRank · unranked

63 citations

Mohamed El‐Tholoth, Yize Li, Jevon Graham-Wooten, Yining Liang, Juan Li +5 more

The lung microbiome in lung transplantation

The Journal of Heart and Lung Transplantation(2021)10.1016/j.healun.2021.04.014

N/A

0DataRank · unranked

51 citations

Samantha A. Whiteside, Áurea Simón‐Soro, Joshua M. Diamond, Jason D. Christie, F.D. Bushman +2 more

Femtomolar SARS-CoV-2 Antigen Detection Using the Microbubbling Digital Assay with Smartphone Readout Enables Antigen Burden Quantitation and Tracking

Clinical Chemistry(2021)10.1093/clinchem/hvab158

N/A

0DataRank · unranked

16 citations

Zhao Li, Sheng Feng, Melissa Richard‐Greenblatt, Emily Hutson, Stefen Andrianus +20 more

SARS-CoV-2 Genomic Variation in Space and Time in Hospitalized Patients in Philadelphia

mBio(2021)10.1128/mbio.03456-20

N/A

0DataRank · unranked

31 citations

Pascha Hokama, Aoife M. Roche, Shantan Reddy, Young Sun Hwang, Lyanna R. Kessler +13 more

CD4 receptor diversity represents an ancient protection mechanism against primate lentiviruses

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2025914118

N/A

0DataRank · unranked

30 citations

Frédéric Bibollet‐Ruche, Weimin Liu, Scott Sherrill-Mix, Yingying Li, Andrew Connell +28 more

Redondovirus Diversity and Evolution on Global, Individual, and Molecular Scales

Journal of Virology(2021)10.1128/jvi.00817-21

N/A

0DataRank · unranked

20 citations

Marisol I. Dothard, Meagan Rubel, Audrey Allen, Young Sun Hwang, Aoife M. Roche +19 more

Decreased Intestinal Microbiome Diversity in Pediatric Sepsis: A Conceptual Framework for Intestinal Dysbiosis to Influence Immunometabolic Function

Critical Care Explorations(2021)10.1097/cce.0000000000000360

N/A

0DataRank · unranked

13 citations

Kyle Bittinger, Jung‐Jin Lee, Elliot S. Friedman, Lisa M. Mattei, Kathryn Graham +10 more

Rengasvirus, a Circular Replication-Associated Protein-Encoding Single-Stranded DNA Virus-Related Genome That Is a Common Contaminant in Metagenomic Data

Microbiology Resource Announcements(2021)10.1128/mra.00273-21

N/A

0DataRank · unranked

4 citations

Louis J. Taylor, Arwa Abbas, Ronald G. Collman, Frederic D. Bushman, Emma L. Keeler

Lack of Atorvastatin Effect on Monocyte Gene Expression and Inflammatory Markers in HIV-1- infected ART-suppressed Individuals at Risk of non-AIDS Comorbidities

Pathogens and Immunity(2021)10.20411/pai.v6i2.461

N/A

0DataRank · unranked

5 citations

Andrew V. Kossenkov, Louise C. Showe, Sarah J. Ratcliffe, Grace Choi, Luis J. Montaner +4 more

Signatures of COVID-19 severity and immune response in the respiratory tract microbiome

medRxiv(2021)10.1101/2021.04.02.21254514

N/A

0DataRank · unranked

19 citations

Guanxiang Liang, Samantha A. Whiteside, Ana G. Cobián-Güemes, Madeline S. Merlino, Louis J. Taylor +16 more

SARS-CoV-2 variants associated with vaccine breakthrough in the Delaware Valley through summer 2021

medRxiv(2021)10.1101/2021.10.18.21264623

N/A

0DataRank · unranked

6 citations

Scott Sherrill-Mix, J.K. Everett, Shantan Reddy, Pascha Hokama, Aoife M. Roche +33 more

Multiple Introductions of SARS-CoV-2 Alpha and Delta Variants into White-Tailed Deer in Pennsylvania

mBio(2022)10.1128/mbio.02101-22

N/A

0DataRank · unranked

71 citations

Scott Sherrill-Mix, J.K. Everett, Hriju Adhikari, Shantan Reddy, Julie C. Ellis +11 more

The enigmatic roles of Anelloviridae and Redondoviridae in humans

Current Opinion in Virology(2022)10.1016/j.coviro.2022.101248

N/A

0DataRank · unranked

60 citations

Emma L. Keeler, Frederic D. Bushman, Ronald G. Collman, Louis J. Taylor

Debulking different Corona (SARS-CoV-2 delta, omicron, OC43) and Influenza (H1N1, H3N2) virus strains by plant viral trap proteins in chewing gums to decrease infection and transmission

Biomaterials(2022)10.1016/j.biomaterials.2022.121671

N/A

0DataRank · unranked

33 citations

Smruti K. Nair, Hancheng Guan, Yuwei Guo, Rachel J. Kulchar, Marcelo D. T. Torres +20 more

The Lung Allograft Microbiome Associates with Pepsin, Inflammation, and Primary Graft Dysfunction

American Journal of Respiratory and Critical Care Medicine(2022)10.1164/rccm.202112-2786oc

N/A

0DataRank · unranked

28 citations

Samantha A. Whiteside, Rebecca A. Deek, Áurea Simón‐Soro, Jevon Graham-Wooten, M. Oyster +8 more

SARS-CoV-2 Variants Associated with Vaccine Breakthrough in the Delaware Valley through Summer 2021

mBio(2022)10.1128/mbio.03788-21

N/A

0DataRank · unranked

16 citations

Scott Sherrill-Mix, J.K. Everett, Shantan Reddy, Pascha Hokama, Aoife M. Roche +33 more

Saliva versus Upper Respiratory Swabs

Journal of Molecular Diagnostics(2022)10.1016/j.jmoldx.2022.03.012

N/A

0DataRank · unranked

3 citations

Chi Ngong Tang, Ayannah S. Fitzgerald, Layla A. Khatib, Jevon Graham-Wooten, Laurel Glaser +4 more

Multiple Introductions of SARS-CoV-2 Alpha and Delta Variants into White-Tailed Deer in Pennsylvania

medRxiv(2022)10.1101/2022.02.17.22270679

N/A

0DataRank · unranked

11 citations

Scott Sherrill-Mix, J.K. Everett, Hriju Adhikari, Shantan Reddy, Julie C. Ellis +11 more

Epigenetic Landscape of HIV Infection in Primary Human Macrophage

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.25.477798

N/A

0DataRank · unranked

4 citations

Yanjie Yi, Olga Vladimirova, Urvi Zhankharia, Ronald G. Collman, Paul M. Lieberman +1 more

Pathogenesis of Aging and Age-related Comorbidities in People with HIV: Highlights from the HIV ACTION Workshop

Pathogens and Immunity(2020)10.20411/pai.v5i1.365

N/A

0DataRank · unranked

82 citations

Beth D. Jamieson, Ronald G. Collman, Michael M. Lederman, Tricia H. Burdo, Steven G. Deeks +8 more

A bacterial cellulose-based and low-cost electrochemical biosensor for ultrasensitive detection of SARS-CoV-2

Cell Reports Physical Science(2023)10.1016/j.xcrp.2023.101476

N/A

0DataRank · unranked

31 citations

André L. Ferreira, Ishani Ranjan, Ronald G. Collman, William R. de Araújo, César de la Fuente‐Núñez +1 more

Distinct community structures of the fungal microbiome and respiratory health in adults with cystic fibrosis

Journal of Cystic Fibrosis(2023)10.1016/j.jcf.2023.02.003

N/A

0DataRank · unranked

15 citations

Scott G. Daniel, Jung‐Jin Lee, Kyle Bittinger, Laurel Glaser, Lisa M. Mattei +5 more

Tracking gut microbiome and bloodstream infection in critically ill adults

PLoS ONE(2023)10.1371/journal.pone.0289923

N/A

0DataRank · unranked

10 citations

Layla A. Khatib, Ayannah S. Fitzgerald, Jevon Graham-Wooten, C.A.G. Ittner, Scott Sherrill-Mix +6 more

Pseudomonas-dominant microbiome elicits sustained IL-1β upregulation in alveolar macrophages from lung transplant recipients

The Journal of Heart and Lung Transplantation(2023)10.1016/j.healun.2023.04.005

N/A

0DataRank · unranked

7 citations

A.F. Villabona-Rueda, Samantha A. Whiteside, Joby Mathew, Matthew Kelley, Sean Agbor-Enoh +7 more

A high-throughput screening assay for silencing established HIV-1 macrophage infection identifies nucleoside analogs that perturb H3K9me3 on proviral genomes

Journal of Virology(2023)10.1128/jvi.00653-23

N/A

0DataRank · unranked

4 citations

Urvi Zankharia, Joel Cassel, Fang Lü, Joseph M. Salvino, Paul M. Lieberman +2 more

Effects of Mask Reuse on the Oropharyngeal, Skin, and Mask Microbiome

The Journal of Infectious Diseases(2023)10.1093/infdis/jiad167

N/A

0DataRank · unranked

6 citations

Ayannah S. Fitzgerald, Layla A. Khatib, Jevon Graham-Wooten, Frederic D. Bushman, Ronald G. Collman +1 more

Label-free detection of synthetic, full genomic length HIV-1 RNA at the few-copy level

Sensors and Actuators B Chemical(2023)10.1016/j.snb.2023.134001

N/A

0DataRank · unranked

3 citations

Inayat Bajwa, Kelly Garcia-Ramos, Yeonjoon Suh, Chengyu Wen, Annie Cheng +5 more

Comparison of SARS-CoV-2 variants of concern in primary human nasal cultures demonstrates Delta as most cytopathic and Omicron as fastest replicating

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.24.553565

N/A

0DataRank · unranked

3 citations

Anant K. Patel, Li Tan, Andrew D. Marques, Ranawaka A. P. M. Perera, Scott Sherrill-Mix +9 more

SARS-CoV-2 evolution during prolonged infection in immunocompromised patients

mBio(2024)10.1128/mbio.00110-24

N/A

0DataRank · unranked

36 citations

Jevon Graham-Wooten, Ayannah S. Fitzgerald, Ashley Sobel Leonard, Emma J. Cook, J.K. Everett +6 more

The virome of the kitome: small circular virus-like genomes in laboratory reagents

Microbiology Resource Announcements(2024)10.1128/mra.01261-23

N/A

0DataRank · unranked

10 citations

Emma L. Keeler, Alexander McFarland, Phillip Scott, Ronald G. Collman, Frederic D. Bushman +1 more

Association of smoking with neurocognition, inflammatory and myeloid cell activation profiles in people with HIV on antiretroviral therapy

AIDS(2024)10.1097/qad.0000000000004015

N/A

0DataRank · unranked

3 citations

Gabrielle Gionet, Antoneta Karaj, Andrew V. Kossenkov, Toshitha Kannan, Mary Putt +4 more

Microbiome Profiling Demonstrates Concordance of Endotracheal Tube Aspirates With Direct Lower Airway Sampling in Intubated Patients

CHEST Journal(2024)10.1016/j.chest.2024.01.007

N/A

0DataRank · unranked

3 citations

Jevon Graham-Wooten, Samantha A. Whiteside, Ayannah S. Fitzgerald, Layla A. Khatib, C. Kevin +6 more

Evolution of SARS-CoV-2 in white-tailed deer in Pennsylvania 2021–2024

PLoS Pathogens(2025)10.1371/journal.ppat.1012883

N/A

0DataRank · unranked

8 citations

Matthew Hogenauer, Natalie Bauer, Michelle Gibison, Beatrice DeMarco, Scott Sherrill-Mix +5 more

Lung transplant for CF: Low lung bacterial burden and immune mediators in year one associate with CLAD development

Journal of Cystic Fibrosis(2025)10.1016/j.jcf.2025.10.002

N/A

0DataRank · unranked

0 citations

John E. McGinniss, Rebecca A. Deek, Carter Merenstein, Noel Britton, Áurea Simón‐Soro +15 more

Pseudomonas aeruginosa Elicits Sustained IL-1β Upregulation in Alveolar Macrophages from Lung Transplant Recipients

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.26.489590

N/A

0DataRank · unranked

0 citations

A.F. Villabona-Rueda, Samantha A. Whiteside, Joby Mathew, Matthew Kelley, Sean Agbor-Enoh +7 more

ICTV Virus Taxonomy Profile: Redondoviridae

Journal of General Virology(2020)10.1099/jgv.0.001526

N/A

0DataRank · unranked

19 citations

Louis J. Taylor, Ronald G. Collman, Frederic D. Bushman, Arwa Abbas

Heightened resistance to type 1 interferons characterizes HIV-1 at transmission and following analytical treatment interruption

medRxiv(2020)10.1101/2020.08.24.20181149

N/A

0DataRank · unranked

1 citations

Scott Sherrill-Mix, Frédéric Bibollet‐Ruche, Ronnie M. Russell, Stephanie Trimboli, Andrew G. Smith +29 more

The lung microbiome: progress and promise

Journal of Clinical Investigation(2021)10.1172/jci150473

N/A

0DataRank · unranked

169 citations

John E. McGinniss, Ronald G. Collman, Samantha A. Whiteside

Signatures of COVID-19 Severity and Immune Response in the Respiratory Tract Microbiome

mBio(2021)10.1128/mbio.01777-21

N/A

0DataRank · unranked

124 citations

Guanxiang Liang, Samantha A. Whiteside, Ana G. Cobián-Güemes, Madeline S. Merlino, Louis J. Taylor +16 more