Niko Beerenwinkel

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 25 papers. Top paper: “ROCR: visualizing classifier performance in R”.

ROCR: visualizing classifier performance in R

Bioinformatics(2005)10.1093/bioinformatics/bti623

N/A

1.2DataRank · unranked

3328 citations

O. Sander, Tobias Sing, Oliver Sander, Niko Beerenwinkel, Thomas Lengauer +1 more

Eleven grand challenges in single-cell data science

Genome Biology(2020)10.1186/s13059-020-1926-6

N/A

1.1DataRank · unranked

1396 citations

Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson +49 more

Mutation order in acute myeloid leukemia identifies uncommon patterns of evolution and illuminates phenotypic heterogeneity

Leukemia(2024)10.1038/s41375-024-02211-z

N/A

0.827DataRank · unranked

34 citations

Katharina Jahn, Jack Kuipers, Linde A. Miles, Robert L. Bowman, Troy M. Robinson +12 more

LifeTime and improving European healthcare through cell-based interceptive medicine

Nature(2020)10.1038/s41586-020-2715-9

N/A

0.747DataRank · unranked

144 citations

Geneviève Almouzni, Stanislaw A. Gorski, Stein Aerts, Ido Amit, Michela G. Bertero +178 more

Clonal Evolution of Acute Myeloid Leukemia Revealed by High-Throughput Single-Cell Genomics

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.07.925743

N/A

0.633DataRank · unranked

67 citations

Feng Wang, Katharina Jahn, Jack Kuipers, Yuanqing Yan, Jairo Matthews +22 more

12 Grand Challenges in Single-Cell Data Science

(2019)10.7287/peerj.preprints.27885v3

N/A

0.449DataRank · unranked

7 citations

Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson +50 more

12 Grand challenges in single-cell data science

(2019)10.7287/peerj.preprints.27885v2

N/A

0.330DataRank · unranked

5 citations

Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson +50 more

HIV-1 subtype-specific drug resistance on dolutegravir-based antiretroviral therapy: protocol for a multicentre study (DTG RESIST)

BMJ Open(2024)10.1136/bmjopen-2024-085819

N/A

0.292DataRank · unranked

6 citations

Mamatha Sauermann, Tom Loosli, Stefanie Hossmann, Selma Riedo, Niko Beerenwinkel +7 more

Mutation order in acute myeloid leukemia identifies uncommon patterns of evolution and illuminates phenotypic heterogeneity

Research Square(2023)10.21203/rs.3.rs-3516536/v1

N/A

0.241DataRank · unranked

4 citations

Matthew Schwede, Katharina Jahn, Jack Kuipers, Linde A. Miles, Robert L. Bowman +12 more

12 Grand Challenges in Single-Cell Data Science

(2019)10.7287/peerj.preprints.27885

N/A

0.228DataRank · unranked

2 citations

Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson +50 more

12 Grand challenges in single-cell data science

(2019)10.7287/peerj.preprints.27885v1

N/A

0.193DataRank · unranked

2 citations

Johannes Köster, Ewa Szcureck, Stephanie C. Hicks, Mark D. Robinson, Catalina A. Vallejos +50 more

Genomic reproducibility in the bioinformatics era

Genome biology(2024)10.1186/s13059-024-03343-2

N/A

0DataRank · unranked

27 citations

Paweł P. Łabaj, Florian Markowetz, Lynn M. Schriml, Daniel J. Stekhoven, Serghei Mangul +2 more

HIV-1 subtype-specific drug resistance on dolutegravir-based antiretroviral therapy: protocol for a multicentre longitudinal study (DTG RESIST)

medRxiv(2024)10.1101/2024.05.23.24307850

N/A

0DataRank · unranked

0 citations

Mamatha Sauermann, Tom Loosli, Stefanie Hossmann, Selma Riedo, Niko Beerenwinkel +7 more

Assessing genomic reproducibility of read alignment tools

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.08.652934

N/A

0DataRank · unranked

0 citations

M. A. Simonov, Dhrithi Deshpande, Ful Belin Korukoglu, Jaden Moore, Karishma Chhugani +7 more

A recurrent adaptive mutation in the transmembrane 2B protein of an insect picorna-like virus in a nonnative host

Journal of Virology(2025)10.1128/jvi.01239-25

N/A

0DataRank · unranked

0 citations

Lara Fuhrmann, Reinder T. Bos, Haitao Wang, Milou Stevens, Niko Beerenwinkel +3 more

Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research

Briefings in Bioinformatics(2020)10.1093/bib/bbaa232

N/A

0DataRank · unranked

149 citations

Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman +50 more

Clonal evolution of acute myeloid leukemia revealed by high-throughput single-cell genomics

Nature Communications(2020)10.1038/s41467-020-19119-8

N/A

0DataRank · unranked

391 citations

Feng Wang, Katharina Jahn, Tianyuan Hu, Tomoyuki Tanaka, Yuya Sasaki +28 more

Bayesian reconstruction of transmission trees from genetic sequences and uncertain infection times

Statistical Applications in Genetics and Molecular Biology(2020)10.1515/sagmb-2019-0026

N/A

0DataRank · unranked

5 citations

Susan J. Little, Mozhgan Mozaffarilegha, Niko Beerenwinkel, Victor DeGruttola, Hesam Montazeri

Computational Strategies to Combat COVID-19: Useful Tools to Accelerate SARS-CoV-2 and Coronavirus Research

Preprints.org(2020)10.20944/preprints202005.0376.v1

N/A

0DataRank · unranked

19 citations

Kevin Lamkiewicz, Alexandre Almeida, Abdel Aouacheria, Cecilia N. Arighi, Alex Bateman +50 more

Spatial structure governs the mode of tumour evolution

Nature Ecology & Evolution(2021)10.1038/s41559-021-01615-9

N/A

0DataRank · unranked

118 citations

Dominik Bürri, Cécile Le Sueur, Jeanne Lemant, Yannick Viossat, Jakob Nikolas Kather +2 more

Comparing mutational pathways to lopinavir resistance in HIV-1 subtypes B versus C

PLoS Computational Biology(2021)10.1371/journal.pcbi.1008363

N/A

0DataRank · unranked

7 citations

Gert U. van Zyl, Hesam Montazeri, Jack Kuipers, Soo‐Yon Rhee, Roger D. Kouyos +3 more

Author Correction: Clonal evolution of acute myeloid leukemia revealed by high-throughput single-cell genomics

Nature Communications(2021)10.1038/s41467-021-23280-z

N/A

0DataRank · unranked

7 citations

Feng Wang, Katharina Jahn, Tianyuan Hu, Tomoyuki Tanaka, Yuya Sasaki +28 more

Unlocking capacities of genomics for the COVID-19 response and future pandemics

Nature Methods(2022)10.1038/s41592-022-01444-z

N/A

0DataRank · unranked

67 citations

Karishma Chhugani, Varuni Sarwal, Ram Ayyala, Harman Singh, Smruthi Karthikeyan +30 more

Biallelic ELOC-Inactivated Renal Cell Carcinoma: Molecular Features Supporting Classification as a Distinct Entity

Modern Pathology(2023)10.1016/j.modpat.2023.100194

N/A

0DataRank · unranked

23 citations

Dorothea Rutishauser, Bettina Sobottka, Peter Schraml, Niko Beerenwinkel, Holger Moch +1 more

Genome-wide DNA methylation profiling of HPV-negative leukoplakia and gingivobuccal complex cancers

Clinical Epigenetics(2023)10.1186/s13148-023-01510-z

N/A

0DataRank · unranked

18 citations

Sumana Srivatsa, Srikant Ambatipudi, Priyanka G. Bhosale, Asawari Patil, Alejandro A. Schäffer +3 more