🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Julia Markowski

Harvard University

ORCID: 0000-0002-0573-7832

Also affiliated with University of Potsdam, Max Delbrück Center, Humboldt-Universität zu Berlin

Biochemistry, Genetics and Molecular BiologyMedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.8Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations

Nature Communications(2020)10.1038/s41467-019-13885-w
Top 13%
1.6DataRank
Top 13%76 citations

Fengju Chen, Nuno A. Fonseca, Yao He, Masashi Fujita, Hidewaki Nakagawa +91 more

Papers

Driven by 7 papers — median percentile 58. Top paper: “Genomic basis for RNA alterations in cancer”.

Genomic basis for RNA alterations in cancer

Nature(2020)10.1038/s41586-020-1970-0
N/A
8.3DataRank · unranked
426 citations

Claudia Calabrese, Natalie R. Davidson, Deniz Demircioğlu, Nuno A. Fonseca, Yao He +56 more

High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations

Nature Communications(2020)10.1038/s41467-019-13885-w
Top 13%
1.6DataRank
Top 13%76 citations

Fengju Chen, Nuno A. Fonseca, Yao He, Masashi Fujita, Hidewaki Nakagawa +91 more

GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.30.927061
N/A
0.208DataRank · unranked
3 citations

Rieke Kempfer, Alexander Kukalev, Ibai Irastorza-Azcárate, Gesa Loof, Birte Kehr +4 more

Comprehensive benchmarking of somatic single-nucleotide variant and indel detection at ultra-low allele fractions using short- and long-read data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.13.681545
Top 70%
0.165DataRank
Top 70%2 citations

Dominika Maziec, Julia Markowski, Stephanie Georges, Nancy L. Parmalee, Michele Berselli +41 more

GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data

Bioinformatics(2021)10.1093/bioinformatics/btab238
N/A
0DataRank · unranked
8 citations

Rieke Kempfer, Alexander Kukalev, Ibai Irastorza-Azcárate, Gesa Loof, Birte Kehr +4 more

Extensive folding variability between homologous chromosomes in mammalian cells

Molecular Systems Biology(2025)10.1038/s44320-025-00107-3
N/A
0DataRank · unranked
5 citations

Alexander Kukalev, Rieke Kempfer, Christoph J. Thieme, Guido Mastrobuoni, Julia Markowski +12 more

The Data Distillery: A Graph Framework for Semantic Integration and Querying of Biomedical Data

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.11.666099
N/A
0DataRank · unranked
3 citations

Benjamin Stear, John K. Simmons, Vincent T. Metzger, Praveen Kumar, John Erol Evangelista +39 more