Rachel R. Ogorzalek Loo

ChemistryBiochemistry, Genetics and Molecular BiologyMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 25 papers. Top paper: “Leveraging Immonium Ions for Targeting Acyl‐Lysine Modifications in Proteomic Datasets”.

Leveraging Immonium Ions for Targeting Acyl‐Lysine Modifications in Proteomic Datasets

PROTEOMICS(2020)10.1002/pmic.202000111

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19 citations

Janine Y. Fu, Hong Hanh Nguyen, Rachel R. Ogorzalek Loo, Joseph A. Loo, John M. Muroski

Kinetics and Optimization of the Lysine–Isopeptide Bond Forming Sortase Enzyme from Corynebacterium diphtheriae

Bioconjugate Chemistry(2020)10.1021/acs.bioconjchem.0c00163

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11 citations

Scott A. McConnell, Ken Ellis‐Guardiola, John M. Muroski, Rachel McAllister, Justin Yu +7 more

Leveraging immonium ions for identifying and targeting acyl-lysine modifications in proteomic datasets

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.20.052191

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0 citations

Janine Y. Fu, Hong Hanh Nyugen, Rachel R. Ogorzalek Loo, Joseph A. Loo, John M. Muroski

Internal Fragments Generated by Electron Ionization Dissociation Enhances Protein Top-down Mass Spectrometry

ChemRxiv(2020)10.26434/chemrxiv.11573337.v1

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0 citations

Carter Lantz, Taylor Perkins, Janine Y. Fu, Wonhyuek Jung, Rachel R. Ogorzalek Loo +2 more

ClipsMS: An Algorithm for Analyzing Internal Fragments Resulting from Top-Down Mass Spectrometry

Journal of Proteome Research(2021)10.1021/acs.jproteome.0c00952

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72 citations

Muhammad A. Zenaidee, Benqian Wei, Zachary Hemminger, Rachel R. Ogorzalek Loo, Joseph A. Loo +1 more

Towards understanding the formation of internal fragments generated by collisionally activated dissociation for top-down mass spectrometry

Analytica Chimica Acta(2021)10.1016/j.aca.2021.339400

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22 citations

Muhammad A. Zenaidee, Carter Lantz, Rachel R. Ogorzalek Loo, Joseph A. Loo, Benqian Wei

ClipsMS: An Algorithm for Analyzing Internal Fragments Resulting from Top-Down Mass Spectrometry

ChemRxiv(2021)10.26434/chemrxiv.13518050

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3 citations

Muhammad A. Zenaidee, Benqian Wei, Zachary Hemminger, Rachel R. Ogorzalek Loo, Joseph A. Loo +1 more

ClipsMS: An Algorithm for Analyzing Internal Fragments Resulting from Top-Down Mass Spectrometry

ChemRxiv(2021)10.26434/chemrxiv.13518050.v1

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0 citations

Muhammad A. Zenaidee, Benqian Wei, Zachary Hemminger, Rachel R. Ogorzalek Loo, Joseph A. Loo +1 more

Amyloid fibrils in FTLD-TDP are composed of TMEM106B and not TDP-43

Nature(2022)10.1038/s41586-022-04670-9

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180 citations

Qin Cao, M.R. Sawaya, Romany Abskharon, P. Ge, Michael DeTure +6 more

Native Top-Down Mass Spectrometry with Collisionally Activated Dissociation Yields Higher-Order Structure Information for Protein Complexes

Journal of the American Chemical Society(2022)10.1021/jacs.2c06726

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50 citations

Benqian Wei, Boyu Zhao, Wonhyeuk Jung, Andrew K. Goring, Jessie Le +4 more

Top-down mass spectrometry and assigning internal fragments for determining disulfide bond positions in proteins

The Analyst(2022)10.1039/d2an01517j

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21 citations

Muhammad A. Zenaidee, Carter Lantz, Brad J. Williams, Sarah M. Totten, Rachel R. Ogorzalek Loo +2 more

The Acyl-Proteome of Syntrophus aciditrophicus Reveals Metabolic Relationships in Benzoate Degradation

Molecular & Cellular Proteomics(2022)10.1016/j.mcpro.2022.100215

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10 citations

Janine Y. Fu, Hong Hanh Nguyen, Neil Q. Wofford, Housna Mouttaki, Kimberly L. James +5 more

On the Mechanism of Theta Capillary Nanoelectrospray Ionization for the Formation of Highly Charged Protein Ions Directly from Native Solutions

Analytical Chemistry(2022)10.1021/acs.analchem.2c01654

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4 citations

Muhammad A. Zenaidee, Joseph A. Loo, Rachel R. Ogorzalek Loo, William A. Donald, Susannah L. Brown

Dynamic acylome reveals metabolite driven modifications in Syntrophomonas wolfei

Frontiers in Microbiology(2022)10.3389/fmicb.2022.1018220

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4 citations

John M. Muroski, Mark A. Arbing, Jessica A. Salguero, Neil Q. Wofford, Michael J. McInerney +4 more

Elucidating the molecular programming of a nonlinear nonribosomal peptide synthetase responsible for fungal siderophore biosynthesis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.10.511241

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2 citations

Yang Hai, Hong Hanh Nguyen, Munro Passmore, Will Skyrud, Junyong Kim +5 more

Amyloid fibrils in frontotemporal lobar degeneration with TDP-43 inclusions are composed of TMEM106B, rather than TDP-43

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.31.478523

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1 citations

Qin Cao, M.R. Sawaya, Romany Abskharon, P. Ge, Michael DeTure +6 more

Added Value of Internal Fragments for Top-Down Mass Spectrometry of Intact Monoclonal Antibodies and Antibody–Drug Conjugates

Analytical Chemistry(2023)10.1021/acs.analchem.3c01426

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31 citations

Carter Lantz, Weijing Liu, Rosa Viner, Rachel R. Ogorzalek Loo, Iain D. G. Campuzano +2 more

Elucidating the molecular programming of a nonlinear non-ribosomal peptide synthetase responsible for fungal siderophore biosynthesis

Nature Communications(2023)10.1038/s41467-023-38484-8

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21 citations

Yang Hai, Hong Hanh Nguyen, Munro Passmore, Will Skyrud, Junyong Kim +5 more

Characterization of Molecular Tweezer Binding on α-Synuclein with Native Top-Down Mass Spectrometry and Ion Mobility-Mass Spectrometry Reveals a Mechanism for Aggregation Inhibition

Journal of the American Society for Mass Spectrometry(2023)10.1021/jasms.3c00281

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13 citations

Jaybree Lopez, Andrew K. Goring, Muhammad A. Zenaidee, Karl Biggs, Julian P. Whitelegge +6 more

Internal Fragments Enhance Middle-Down Mass Spectrometry Structural Characterization of Monoclonal Antibodies and Antibody-Drug Conjugates

Analytical Chemistry(2024)10.1021/acs.analchem.3c04526

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13 citations

Carter Lantz, Rachel R. Ogorzalek Loo, Iain D. G. Campuzano, Joseph A. Loo, Benqian Wei

Composition and in situ structure of the Methanospirillum hungatei cell envelope and surface layer

Science Advances(2024)10.1126/sciadv.adr8596

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4 citations

Jiayan Zhang, Shiqing Liao, Anne M. Henstra, Deborah R. Leon, Jonathan Erde +5 more

Insight into the autoproteolysis mechanism of the RsgI9 anti‐σ factor from Clostridium thermocellum

Proteins Structure Function and Bioinformatics(2024)10.1002/prot.26690

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2 citations

Brendan J. Mahoney, Andrew K. Goring, Tobie Jessup, Rachel R. Ogorzalek Loo, Joseph A. Loo +2 more

Retention and Rearrangement of Membrane Protein Complexes’ Higher Order Structure by Collisionally Activated Dissociation- and Electron Capture Dissociation-Mass Spectrometry

Journal of the American Chemical Society(2025)10.1021/jacs.5c05797

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1 citations

Wonhyeuk Jung, Mark A. Arbing, Pascal F. Egea, Rachel R. Ogorzalek Loo, Joseph A. Loo +1 more

Mass spectrometry structural analysis of intrinsically disordered phosphoproteins

International Journal of Mass Spectrometry(2025)10.1016/j.ijms.2025.117455

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0 citations

Muhammad A. Zenaidee, Denise P. Tran, Karl Biggs, Gal Bitan, Rachel R. Ogorzalek Loo +2 more

An Organometallic Chemistry Approach to Peptide Tricycles

ChemRxiv(2025)10.26434/chemrxiv-2025-mkz71

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0 citations

Michael Rebelo, R. Jenkins, E. Olivares, Rachel R. Ogorzalek Loo, Songrong Qu +12 more