Andrew J. Spakowitz

ORCID: 0000-0002-0585-1942

Also affiliated with Palo Alto Institute, Stanford University

Biochemistry, Genetics and Molecular BiologyEnvironmental SciencePhysics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 12 papers. Top paper: “Cell tumbling enhances stem cell differentiation in hydrogels via nuclear mechanotransduction”.

Cell tumbling enhances stem cell differentiation in hydrogels via nuclear mechanotransduction

Nature Materials(2024)10.1038/s41563-024-02038-0

N/A

1.0DataRank · unranked

48 citations

Georgios Mikos, Xinming Tong, Sauradeep Sinha, Eunice López-Fuentes, Sarah A. Jones +8 more

Impact of chromosomal organization on epigenetic drift and domain stability revealed by physics-based simulations

Biophysical Journal(2021)10.1016/j.bpj.2021.10.019

N/A

0DataRank · unranked

11 citations

Sarah H. Sandholtz, Andrew J. Spakowitz, Joseph G. Wakim

Diffusion and distal linkages govern interchromosomal dynamics during meiotic prophase

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.23.440859

N/A

0DataRank · unranked

1 citations

Bruno Beltran, James McGehee, Daniel Elnatan, Cori K. Cahoon, Michael R. Paddy +4 more

Coarse-grained modeling reveals the impact of supercoiling and loop length in DNA looping kinetics

Biophysical Journal(2022)10.1016/j.bpj.2022.04.009

N/A

0DataRank · unranked

4 citations

Zev Bryant, Andrew J. Spakowitz, Charles H. Starr

Biochemical, Biophysical, and Immunological Characterization of Respiratory Secretions in Severe SARS-CoV-2 (COVID-19) Infections

medRxiv(2022)10.1101/2022.03.28.22272848

N/A

0DataRank · unranked

1 citations

Gernot Kaber, Sally Demirdjian, Pamela C. Cai, Elizabeth B. Burgener, Nadine Nagy +22 more

The lysogenic filamentous Pseudomonas bacteriophage phage Pf slows mucociliary transport

PNAS Nexus(2024)10.1093/pnasnexus/pgae390

N/A

0DataRank · unranked

8 citations

Pamela C. Cai, Michael J. Kratochvil, Laura S. Rojas‐Hernandez, Nam Soo Joo, Aditi Gupta +7 more

Determining mesoscale chromatin structure parameters from spatially correlated cleavage data using a coarse-grained oligonucleosome model

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.28.605011

N/A

0DataRank · unranked

1 citations

Nicole Pagane, D. West, Andrew J. Spakowitz, Viviana I. Risca, Ariana Brenner Clerkin

Nucleosome placement and polymer mechanics explain genomic contacts on 100kbp scales

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.24.614727

N/A

0DataRank · unranked

0 citations

Jiachun Li, Hanjuan Shao, Praveen Krishna Veerasubramanian, Andrew J. Spakowitz, Timothy L. Downing +2 more

High-resolution dynamic imaging of chromatin DNA communication using Oligo-LiveFISH

Cell(2025)10.1016/j.cell.2025.03.032

N/A

0DataRank · unranked

28 citations

Ashwin Balaji, Mengting Han, Leonid Andronov, Anish R. Roy, Zheng Wei +12 more

Nucleosome placement and polymer mechanics explain genomic contacts on 100 kb scales

Nucleic Acids Research(2025)10.1093/nar/gkaf670

N/A

0DataRank · unranked

1 citations

Jiachun Li, Hanjuan Shao, Praveen Krishna Veerasubramanian, Andrew J. Spakowitz, Timothy L. Downing +2 more

Biochemical and Biophysical Characterization of Respiratory Secretions in Severe SARS-CoV-2 (COVID-19) Infections

medRxiv(2020)10.1101/2020.09.11.20191692

N/A

0DataRank · unranked

18 citations

Gernot Kaber, Pamela C. Cai, Elizabeth B. Burgener, Graham L. Barlow, Mark R. Nicolls +12 more

Tuning viscoelasticity of dynamic covalent hydrogels for human tissue modeling

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.16.682916

N/A

0DataRank · unranked

1 citations

Fotis Christakopoulos, Michelle S. Huang, Neil J. Baugh, Carla Huerta-López, Eliana X. Matos +4 more