🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Alex Morehead

International Computer Science Institute

ORCID: 0000-0002-0586-6191

Also affiliated with Lawrence Berkeley National Laboratory, National Energy Research Scientific Computing Center, University of Missouri

Biochemistry, Genetics and Molecular BiologyComputer ScienceMaterials Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile
3.8Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment

Proteins Structure Function and Bioinformatics(2023)10.1002/prot.26609
Top 11%
1.9DataRank
Top 11%81 citations

Guillaume Brysbaert, Nessim Raouraoua, Paul A. Bates, Marco Giulini, Rodrigo V. Honorato +95 more

Papers

Driven by 21 papers — median percentile 71. Top paper: “Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment”.

Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment

Proteins Structure Function and Bioinformatics(2023)10.1002/prot.26609
Top 11%
1.9DataRank
Top 11%81 citations

Guillaume Brysbaert, Nessim Raouraoua, Paul A. Bates, Marco Giulini, Rodrigo V. Honorato +95 more

DIPS-Plus: The enhanced database of interacting protein structures for interface prediction

Scientific Data(2023)10.1038/s41597-023-02409-3
Top 23%
0.879DataRank
Top 23%25 citations

Chen Chen, Ada Sedova, Jianlin Cheng, Alex Morehead

Impact of AlphaFold on Structure Prediction of Protein Complexes: The CASP15-CAPRI Experiment

Utrecht University Repository (Utrecht University)(2023)10.22541/au.168888815.53957253/v1
Top 36%
0.540DataRank
Top 36%17 citations

Guillaume Brysbaert, Nessim Raouraoua, Paul A. Bates, Marco Giulini, Rodrigo V. Honorato +95 more

Evaluating representation learning on the protein structure universe

PubMed(2024)10.48550/arxiv.2406.13864
Top 43%
0.435DataRank
Top 43%6 citations

Alex Morehead, Chaitanya K Joshi, Zuobai Zhang, Kieran Didi, Simon V. Mathis +6 more

A gated graph transformer for protein complex structure quality assessment and its performance in CASP15

Bioinformatics(2023)10.1093/bioinformatics/btad203
N/A
0DataRank · unranked
25 citations

Alex Morehead, Jian Liu, Jianlin Cheng, Xiao Chen

Geometry-Complete Diffusion for 3D Molecule Generation and Optimization

arXiv (Cornell University)(2023)10.48550/arxiv.2302.04313
N/A
0DataRank · unranked
7 citations

Jianlin Cheng, Alex Morehead

Semi-Supervised Graph Learning Meets Dimensionality Reduction

(2023)10.1109/icmla58977.2023.00303
N/A
0DataRank · unranked
1 citations

Watchanan Chantapakul, Jianlin Cheng, Alex Morehead

Geometry-complete diffusion for 3D molecule generation and optimization

Communications Chemistry(2024)10.1038/s42004-024-01233-z
N/A
0DataRank · unranked
65 citations

Jianlin Cheng, Alex Morehead

Geometry-complete perceptron networks for 3D molecular graphs

Bioinformatics(2024)10.1093/bioinformatics/btae087
N/A
0DataRank · unranked
18 citations

Jianlin Cheng, Alex Morehead

Protein structure accuracy estimation using geometry‐complete perceptron networks

Protein Science(2024)10.1002/pro.4932
N/A
0DataRank · unranked
9 citations

Jian Liu, Jianlin Cheng, Alex Morehead

gRNAde: Geometric Deep Learning for 3D RNA inverse design

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.31.587283
N/A
0DataRank · unranked
21 citations

Arian R. Jamasb, Ramón Viñas, Charles B. Harris, Simon V. Mathis, Alex Morehead +3 more

Assessing the potential of deep learning for protein–ligand docking

Nature Machine Intelligence(2025)10.1038/s42256-025-01160-1
N/A
0DataRank · unranked
11 citations

Nabin Giri, Jian LIU, Pawan Neupane, Jianlin Cheng, Alex Morehead

FlowDock: Geometric flow matching for generative protein–ligand docking and affinity prediction

Bioinformatics(2025)10.1093/bioinformatics/btaf187
N/A
0DataRank · unranked
12 citations

Jianlin Cheng, Alex Morehead

Protein‐Ligand Structure and Affinity Prediction in CASP16 Using a Geometric Deep Learning Ensemble and Flow Matching

Proteins Structure Function and Bioinformatics(2025)10.1002/prot.26827
N/A
0DataRank · unranked
4 citations

Jian Liu, Pawan Neupane, Nabin Giri, Jianlin Cheng, Alex Morehead

Protein-ligand structure and affinity prediction in CASP16 using a geometric deep learning ensemble and flow matching

(2025)10.22541/au.173812699.96369139/v1
N/A
0DataRank · unranked
2 citations

Jian Liu, Pawan Neupane, Nabin Giri, Jianlin Cheng, Alex Morehead

How to go with the flow: flow matching in bioinformatics and computational biology

(2025)10.22541/au.175382408.89466370/v3
N/A
0DataRank · unranked
2 citations

Lazar Atanackovic, Akshata Hegde, Yanli Wang, Frimpong Boadu, Joel Selvaraj +4 more

High-Performance Deep Learning Toolbox for Genome-Scale Prediction of Protein Structure and Function

PubMed(2021)10.1109/mlhpc54614.2021.00010
N/A
0DataRank · unranked
13 citations

Peik K. Lund-Andersen, Alex Morehead, Sajid Mahmud, Chen Chen, Xiao Chen +12 more

Flow matching for generative modeling in bioinformatics and computational biology

(2025)10.22541/au.175382408.89466370/v4
N/A
0DataRank · unranked
0 citations

Lazar Atanackovic, Akshata Hegde, Yanli Wang, Frimpong Boadu, Joel Selvaraj +4 more

3D-equivariant graph neural networks for protein model quality assessment

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.12.488060
N/A
0DataRank · unranked
7 citations

Xiao Chen, Alex Morehead, Tianqi Wu, Jianlin Cheng, Chen Chen

A Gated Graph Transformer for Protein Complex Structure Quality Assessment and its Performance in CASP15

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.19.492741
N/A
0DataRank · unranked
7 citations

Alex Morehead, Jian Liu, Jianlin Cheng, Xiao Chen

3D-equivariant graph neural networks for protein model quality assessment

Bioinformatics(2023)10.1093/bioinformatics/btad030
N/A
0DataRank · unranked
33 citations

Xiao Chen, Alex Morehead, Tianqi Wu, Jianlin Cheng, Chen Chen