Abir Ganguly

Also affiliated with Tandem Diabetes Care (United States)

Biochemistry, Genetics and Molecular BiologyComputer ScienceAgricultural and Biological SciencesNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 13 papers. Top paper: “Confluence of theory and experiment reveals the catalytic mechanism of the Varkud satellite ribozyme”.

Confluence of theory and experiment reveals the catalytic mechanism of the Varkud satellite ribozyme

Nature Chemistry(2020)10.1038/s41557-019-0391-x

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0DataRank · unranked

58 citations

Benjamin P. Weissman, Timothy J. Giese, Nan‐Sheng Li, Shuichi Hoshika, Saieesh A. Rao +4 more

Tuning flavin environment to detect and control light-induced conformational switching in Drosophila cryptochrome

Communications Biology(2021)10.1038/s42003-021-01766-2

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0DataRank · unranked

49 citations

Connor M. Schneps, Robert Dunleavy, Changfan Lin, Cristina C. DeOliveira, Abir Ganguly +2 more

Peripheral Methionine Residues Impact Flavin Photoreduction and Protonation in an Engineered LOV Domain Light Sensor

Biochemistry(2021)10.1021/acs.biochem.1c00064

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0DataRank · unranked

10 citations

Sabine Oldemeyer, Elena Böhm, Abir Ganguly, Darrin M. York, Tilman Kottke +2 more

Mechanistic insight into light-dependent recognition of Timeless by Drosophila cryptochrome

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.10.459772

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0DataRank · unranked

1 citations

Connor M. Schneps, Siddarth Chandrasekaran, Abir Ganguly, Brian R. Crane, Changfan Lin

Introducing a New Bond-Forming Activity in an Archaeal DNA Polymerase by Structure-Guided Enzyme Redesign

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.28.474375

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0DataRank · unranked

1 citations

William A. Hansen, Jonathan Hong, Abir Ganguly, Darrin M. York, Sagar D. Khare +2 more

Robust, Efficient and Automated Methods for Accurate Prediction of Protein-Ligand Binding Affinities in AMBER Drug Discovery Boost

ChemRxiv(2021)10.26434/chemrxiv.14727573.v1

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0DataRank · unranked

0 citations

Hsu‐Chun Tsai, Abir Ganguly, Timothy J. Giese, Darrin M. York, Tai‐Sung Lee

Robust, Efficient and Automated Methods for Accurate Prediction of Protein-Ligand Binding Affinities in AMBER Drug Discovery Boost

ChemRxiv(2021)10.26434/chemrxiv.14727573

N/A

0DataRank · unranked

0 citations

Hsu‐Chun Tsai, Abir Ganguly, Timothy J. Giese, Darrin M. York, Tai‐Sung Lee

AMBER Drug Discovery Boost Tools: Automated Workflow for Production Free-Energy Simulation Setup and Analysis (ProFESSA)

Journal of Chemical Information and Modeling(2022)10.1021/acs.jcim.2c00879

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0DataRank · unranked

38 citations

Hsu‐Chun Tsai, Mario Fernández-Pendás, Tai‐Sung Lee, Timothy J. Giese, Darrin M. York +1 more

Mechanistic insight into light-dependent recognition of Timeless by Drosophila Cryptochrome

Structure(2022)10.1016/j.str.2022.03.010

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0DataRank · unranked

26 citations

Connor M. Schneps, Siddarth Chandrasekaran, Abir Ganguly, Brian R. Crane, Changfan Lin

Room-temperature serial synchrotron crystallography of Drosophila cryptochrome

Acta Crystallographica Section D Structural Biology(2022)10.1107/s2059798322007008

N/A

0DataRank · unranked

9 citations

Abir Ganguly, Brian R. Crane, Connor M. Schneps

ACES: Optimized Alchemically Enhanced Sampling

Journal of Chemical Theory and Computation(2023)10.1021/acs.jctc.2c00697

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0DataRank · unranked

55 citations

Hsu‐Chun Tsai, Abir Ganguly, Darrin M. York, Tai‐Sung Lee

AMBER Free Energy Tools: A New Framework for the Design of Optimized Alchemical Transformation Pathways

Journal of Chemical Theory and Computation(2023)10.1021/acs.jctc.2c00725

N/A

0DataRank · unranked

43 citations

Tai‐Sung Lee, Abir Ganguly, Timothy J. Giese, Maximilian CCJC Ebert, Paul Labute +3 more

Improvements in Precision of Relative Binding Free Energy Calculations Afforded by the Alchemical Enhanced Sampling (ACES) Approach

Journal of Chemical Information and Modeling(2024)10.1021/acs.jcim.4c00464

N/A

0DataRank · unranked

9 citations

James Xu, Guo Zhenyu, Yinhui Yi, Chuan Tian, Xinyu Que +6 more